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Journal ArticleDOI

Mutations in GRIN2A cause idiopathic focal epilepsy with rolandic spikes

Johannes R. Lemke, +73 more
- 01 Sep 2013 - 
- Vol. 45, Iss: 9, pp 1067-1072
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TLDR
Results establish alterations of the gene encoding the NMDA receptor NR2A subunit as a major genetic risk factor for IFE.
Abstract
Idiopathic focal epilepsy (IFE) with rolandic spikes is the most common childhood epilepsy, comprising a phenotypic spectrum from rolandic epilepsy (also benign epilepsy with centrotemporal spikes, BECTS) to atypical benign partial epilepsy (ABPE), Landau-Kleffner syndrome (LKS) and epileptic encephalopathy with continuous spike and waves during slow-wave sleep (CSWS). The genetic basis is largely unknown. We detected new heterozygous mutations in GRIN2A in 27 of 359 affected individuals from 2 independent cohorts with IFE (7.5%; P = 4.83 × 10(-18), Fisher's exact test). Mutations occurred significantly more frequently in the more severe phenotypes, with mutation detection rates ranging from 12/245 (4.9%) in individuals with BECTS to 9/51 (17.6%) in individuals with CSWS (P = 0.009, Cochran-Armitage test for trend). In addition, exon-disrupting microdeletions were found in 3 of 286 individuals (1.0%; P = 0.004, Fisher's exact test). These results establish alterations of the gene encoding the NMDA receptor NR2A subunit as a major genetic risk factor for IFE.

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Journal ArticleDOI

Genotype and phenotype analysis of epilepsy caused by ADGRV1 mutations in Chinese children

TL;DR: Wang et al. as discussed by the authors investigated the genotype and phenotype of epilepsy caused by ADGRV1 variants in Chinese children and found a statistically significant association between these variants and febrile and afebrile seizures.
Journal ArticleDOI

Genetic Advances in Epilepsy

Ruben Kuzniecky, +1 more
- 01 Jan 2015 - 
TL;DR: A review of recently discovered epilepsy genes and the importance of a genetic diagnosis in patient care is discussed, especially in noninherited, severe epileptic encephalopathies.
Journal ArticleDOI

A case with GRIN2A mutation and its non-neurological manifestations

TL;DR: This case report presents a female patient with epilepsy, delay in expressive language and social development, and intellectual disability with low intelligence quotient and memory quotient, but normal motor development who was found to have a missense and a nonsense mutation in GRIN2A.
Book ChapterDOI

Etiology and Genetics

Makiko Kaga
TL;DR: Functional abnormalities with epileptic discharge is the actual etiology of LKS and GRIN2A seems to be related with ESES/CSWS but not has direct relation with LKS.
References
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Journal ArticleDOI

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TL;DR: A new method and the corresponding software tool, PolyPhen-2, which is different from the early tool polyPhen1 in the set of predictive features, alignment pipeline, and the method of classification is presented and performance, as presented by its receiver operating characteristic curves, was consistently superior.
Journal ArticleDOI

MutationTaster evaluates disease-causing potential of sequence alterations

TL;DR: MutationTaster allows the efficient filtering of NGS data for alterations with high disease-causing potential and provides Perl scripts that can process data from all major platforms (Roche 454, Illumina Genome Analyzer and ABI SOLiD).
Journal ArticleDOI

Strategies for multilocus linkage analysis in humans.

TL;DR: The results show that considerable economy and efficiency can be brought to the mapping endeavor by resorting to appropriate strategies of detecting linkage and by constructing the human genetic map on a common reference panel of families.
Journal ArticleDOI

Human Splicing Finder: an online bioinformatics tool to predict splicing signals

TL;DR: Human Splicing Finder is designed, a tool to predict the effects of mutations on splicing signals or to identify splicing motifs in any human sequence, and it is shown that the mutation effect was correctly predicted in almost all cases.
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