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Open AccessJournal ArticleDOI

The ER membrane protein complex is a transmembrane domain insertase

TLDR
It is found that known membrane insertion pathways fail to effectively engage tail-anchored membrane proteins with moderately hydrophobic transmembrane domains, and these proteins are instead shielded in the cytosol by calmodulin.
Abstract
Insertion of proteins into membranes is an essential cellular process. The extensive biophysical and topological diversity of membrane proteins necessitates multiple insertion pathways that remain incompletely defined. Here we found that known membrane insertion pathways fail to effectively engage tail-anchored membrane proteins with moderately hydrophobic transmembrane domains. These proteins are instead shielded in the cytosol by calmodulin. Dynamic release from calmodulin allowed sampling of the endoplasmic reticulum (ER), where the conserved ER membrane protein complex (EMC) was shown to be essential for efficient insertion in vitro and in cells. Purified EMC in synthetic liposomes catalyzed the insertion of its substrates in a reconstituted system. Thus, EMC is a transmembrane domain insertase, a function that may explain its widely pleiotropic membrane-associated phenotypes across organisms.

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Biochemistry and Molecular Biology of Flaviviruses

TL;DR: This review examines the molecular biology of flaviviruses touching on the structure and function of viral components and how these interact with host factors, and highlights the role of a noncoding RNA produced by flavIViruses to impair antiviral host immune responses.
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Folding and Misfolding of Human Membrane Proteins in Health and Disease: From Single Molecules to Cellular Proteostasis

TL;DR: This review comprehensively outline current perspectives on the folding and misfolding of integral MPs as well as the mechanisms of cellular MP quality control and highlights new opportunities for innovations that bridge the molecular understanding of the energetics of MP folding with the nuanced complexity of biological systems.
Journal ArticleDOI

EMC Is Required to Initiate Accurate Membrane Protein Topogenesis

TL;DR: It is found that efficient biogenesis of β1-adrenergic receptor (β1AR) and other G protein-coupled receptors (GPCRs) requires the conserved ER membrane protein complex (EMC), which inserts TMDs co-translationally and cooperates with the Sec61 translocon to ensure accurate topogenesis of many membrane proteins.
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A Translocation Pathway for Vesicle-Mediated Unconventional Protein Secretion.

TL;DR: TMED10 is identified as a protein channel for the vesicle entry and secretion of many leaderless cargoes and the interaction of TMED10 C-terminal region with a motif in the cargo accounts for the selective release of the cargoe.
References
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Journal ArticleDOI

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

TL;DR: A new membrane protein topology prediction method, TMHMM, based on a hidden Markov model is described and validated, and it is discovered that proteins with N(in)-C(in) topologies are strongly preferred in all examined organisms, except Caenorhabditis elegans, where the large number of 7TM receptors increases the counts for N(out)-C-in topologies.
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Genome engineering using the CRISPR-Cas9 system

TL;DR: A set of tools for Cas9-mediated genome editing via nonhomologous end joining (NHEJ) or homology-directed repair (HDR) in mammalian cells, as well as generation of modified cell lines for downstream functional studies are described.
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An efficient mRNA-dependent translation system from reticulocyte lysates.

TL;DR: A simple method is described for converting a standard rabbit reticulocyte cell-free extract (lysate) into an mRNA-dependent protein synthesis system, and no residual nuclease activity could be detected, and the tRNA is functionally unimpaired.
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Addition of a photocrosslinking amino acid to the genetic code of Escherichia coli

TL;DR: An orthogonal aminoacyl-tRNA synthetase/tRNA pair is evolved that makes possible the in vivo incorporation of p-benzoyl-l-phenylalanine into proteins in Escherichia coli in response to the amber codon, TAG.
Journal ArticleDOI

Comprehensive characterization of genes required for protein folding in the endoplasmic reticulum

TL;DR: This strategy revealed multiple conserved factors critical for endoplasmic reticulum folding, including an intimate dependence on the later secretory pathway, a previously uncharacterized six-protein transmembrane complex, and a co-chaperone complex that delivers tail-anchored proteins to their membrane insertion machinery.
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