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Open AccessJournal ArticleDOI

Transcriptional regulation of plant cell wall degradation by filamentous fungi

Nina Aro, +2 more
- 01 Sep 2005 - 
- Vol. 29, Iss: 4, pp 719-739
TLDR
This review summarises the current knowledge on the transcriptional regulation, focusing on the recently characterized transcription factors that regulate genes coding for enzymes involved in the breakdown of plant cell wall biopolymers.
Abstract
Plant cell wall consists mainly of the large biopolymers cellulose, hemicellulose, lignin and pectin. These biopolymers are degraded by many microorganisms, in particular filamentous fungi, with the aid of extracellular enzymes. Filamentous fungi have a key role in degradation of the most abundant biopolymers found in nature, cellulose and hemicelluloses, and therefore are essential for the maintenance of the global carbon cycle. The production of plant cell wall degrading enzymes, cellulases, hemicellulases, ligninases and pectinases, is regulated mainly at the transcriptional level in filamentous fungi. The genes are induced in the presence of the polymers or molecules derived from the polymers and repressed under growth conditions where the production of these enzymes is not necessary, such as on glucose. The expression of the genes encoding the enzymes is regulated by various environmental and cellular factors, some of which are common while others are more unique to either a certain fungus or a class of enzymes. This review summarises our current knowledge on the transcriptional regulation, focusing on the recently characterized transcription factors that regulate genes coding for enzymes involved in the breakdown of plant cell wall biopolymers.

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Citations
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Journal ArticleDOI

Advancement and comparative profiles in the production technologies using solid-state and submerged fermentation for microbial cellulases

TL;DR: This review deals with developments in bioprocess technologies, solid-state and submerged fermentation as well as on the strategies adopted for improving cellulase production or properties, including engineering the genes or designing enzyme cocktails.
Journal ArticleDOI

Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi.

TL;DR: Analysis of the gene expression profile of the wheat scab fungus Fusarium graminearum revealed that most of the CAZyme genes related to cell wall degradation were up-regulated during plant infection, and showed that plant pathogenic fungi have the highest number of CAZymes.
Journal Article

Microbial cellulases ─ Production, applications and challenges

TL;DR: The review discusses the current knowledge on cellulase production by microorganisms and the genetic controls exercised on it and the challenges in cellulase research especially in the direction of improving the process economics of enzyme production.
Journal ArticleDOI

Fractional purification and bioconversion of hemicelluloses.

TL;DR: Current isolation and purification strategies are summarized, and the bioconversion of hemicelluloses including pretreatment, enzymatic hydrolysis, and fermentation are discussed.

Economics and environmental impact of bioethanol production technologies: an appraisal

TL;DR: In this paper, a broad overview on current status of bioethanol production technologies in terms of their economic and environmental viability is provided, which includes pretreatment of biomass, the use of cellulolytic enzymes for depolymerisation of carbohydrate polymers into fermentable constituents and the robust fermentative microorganisms for ethanol production.
References
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Journal ArticleDOI

Stress signaling from the lumen of the endoplasmic reticulum: coordination of gene transcriptional and translational controls

TL;DR: What is presently known about the diversity of molecular signaling mechanisms that coordinate the complex ER stress response at the translational and transcriptional level in yeast and in higher eukaryotic cells is summarized.
Journal ArticleDOI

Pectins: structure, biosynthesis, and oligogalacturonide-related signaling.

TL;DR: The view of critical questions regarding pectin structure, biosynthesis, and function that need to be addressed in the coming decade are presented and new methods that may be useful to study localized pectins in the plant cell wall are described.
Journal ArticleDOI

Laccase: new functions for an old enzyme.

TL;DR: This work has focused on more recent reports on the occurrence of laccase and its functions in physiological development and industrial utility and the reports of molecular weights, pH optima, and substrate specificity are extremely diverse.
Journal ArticleDOI

One-thousand-and-one substrates of protein kinase CK2?

TL;DR: An analysis of 308 sites phosphorylated by CK2 highlights the paramount relevance of negatively charged side chains that are (by far) predominant over any other residues at positions n+3 (the most crucial one), n+1, and n+2.
Journal ArticleDOI

Yeast Carbon Catabolite Repression

TL;DR: It is possible in certain cases to propose a partial model of the way in which the different elements involved in catabolite repression may be integrated, and preliminary evidence suggests that Snf1 is in a dephosphorylated state under these conditions.
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