J
John F. Antoniw
Researcher at Rothamsted Research
Publications - 127
Citations - 8627
John F. Antoniw is an academic researcher from Rothamsted Research. The author has contributed to research in topics: Tobacco mosaic virus & Virus. The author has an hindex of 40, co-authored 127 publications receiving 7987 citations. Previous affiliations of John F. Antoniw include The Hertz Corporation & University of Hertfordshire.
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Journal ArticleDOI
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
Li-Jun Ma,H. Charlotte van der Does,Katherine A. Borkovich,Jeffrey J. Coleman,Marie Josée Daboussi,Antonio Di Pietro,Marie Dufresne,Michael Freitag,Manfred Grabherr,Bernard Henrissat,Petra M. Houterman,Seogchan Kang,Won-Bo Shim,Charles P. Woloshuk,Xiaohui Xie,Jin-Rong Xu,John F. Antoniw,Scott E. Baker,B. H. Bluhm,Andrew Breakspear,Daren W. Brown,Robert A. E. Butchko,Sinéad B. Chapman,Richard M.R. Coulson,Pedro M. Coutinho,Etienne Danchin,Etienne Danchin,Andrew C. Diener,Liane R. Gale,Donald M. Gardiner,Stephen A. Goff,Kim E. Hammond-Kosack,Karen Hilburn,Aurélie Hua-Van,Wilfried Jonkers,Kemal Kazan,Chinnappa D. Kodira,Michael Koehrsen,Lokesh Kumar,Yong-Hwan Lee,Liande Li,Liande Li,John M. Manners,Diego Miranda-Saavedra,Mala Mukherjee,Gyungsoon Park,Jongsun Park,Sook Young Park,Sook Young Park,Robert H. Proctor,Aviv Regev,M. Carmen Ruiz-Roldán,Divya Sain,Sharadha Sakthikumar,Sean M. Sykes,David C. Schwartz,B. Gillian Turgeon,Ilan Wapinski,Olen C. Yoder,Sarah Young,Qiandong Zeng,Shiguo Zhou,James E. Galagan,Christina A. Cuomo,H. Corby Kistler,Martijn Rep +65 more
TL;DR: Comparison of genomes of three phenotypically diverse Fusarium species revealed lineage-specific genomic regions in F. oxysporum that include four entire chromosomes and account for more than one-quarter of the genome, putting the evolution of fungal pathogenicity into a new perspective.
Journal ArticleDOI
The Fusarium graminearum Genome Reveals a Link Between Localized Polymorphism and Pathogen Specialization
Christina A. Cuomo,Ulrich Güldener,Jin-Rong Xu,Frances Trail,B. Gillian Turgeon,Antonio Di Pietro,Jonathan D. Walton,Li-Jun Ma,Scott E. Baker,Martijn Rep,Gerhard Adam,John F. Antoniw,Thomas K. Baldwin,Sarah E. Calvo,Yueh-Long Chang,David DeCaprio,Liane R. Gale,Sante Gnerre,Rubella S. Goswami,Kim E. Hammond-Kosack,Linda J. Harris,Karen Hilburn,John C. Kennell,Scott Kroken,Jon K. Magnuson,Gertrud Mannhaupt,Evan Mauceli,Hans-Werner Mewes,Rudolf Mitterbauer,Gary J. Muehlbauer,Martin Münsterkötter,David R. Nelson,Kerry O'Donnell,Thérèse Ouellet,Weihong Qi,Hadi Quesneville,M. Isabel G. Roncero,Kye Yong Seong,Igor V. Tetko,Martin Urban,Cees Waalwijk,Todd J. Ward,Jiqiang Yao,Bruce W. Birren,H. Corby Kistler,H. Corby Kistler +45 more
TL;DR: The genome of the filamentous fungus Fusarium graminearum, a major pathogen of cultivated cereals, was sequenced and annotated and many highly polymorphic regions contained sets of genes implicated in plant-fungus interactions and were unusually divergent, with higher rates of recombination.
Journal ArticleDOI
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
Stephen B. Goodwin,Sarrah Ben M’Barek,Braham Dhillon,Alexander H. J. Wittenberg,Charles F. Crane,James K. Hane,Andrew J Foster,Theo van der Lee,Jane Grimwood,Andrea Aerts,John F. Antoniw,Andy M. Bailey,Burt H. Bluhm,Judith Bowler,James Bristow,Ate van der Burgt,Blondy Canto-Canché,Alice C. L. Churchill,Laura Conde-Ferráez,Hans J. Cools,Pedro M. Coutinho,Michael Csukai,Paramvir S. Dehal,Pierre J. G. M. de Wit,Bruno G. G. Donzelli,Henri van de Geest,Roeland C. H. J. van Ham,Kim E. Hammond-Kosack,Bernard Henrissat,Andrzej Kilian,Adilson Kenji Kobayashi,Edda Koopmann,Yiannis A. I. Kourmpetis,Arnold Kuzniar,Erika Lindquist,Vincent Lombard,Chris Maliepaard,Natália F. Martins,Rahim Mehrabi,Jan P. H. Nap,Alisa Ponomarenko,Jason J. Rudd,Asaf Salamov,Jeremy Schmutz,Henk J. Schouten,Harris Shapiro,Ioannis Stergiopoulos,Stefano F.F. Torriani,Hank Tu,Ronald P. de Vries,Cees Waalwijk,S.B. Ware,Ad Wiebenga,L.H. Zwiers,Richard P. Oliver,Igor V. Grigoriev,Gert H. J. Kema +56 more
TL;DR: The genome of M. graminicola was sequenced completely and found that it contained very few genes for enzymes that break down plant cell walls, which was more similar to endophytes than to pathogens, which may have evolved from endophytic ancestors.
Journal ArticleDOI
Leaf Vitamin C Contents Modulate Plant Defense Transcripts and Regulate Genes That Control Development through Hormone Signaling
G. M. Pastori,Guy Kiddle,John F. Antoniw,Stephanie Bernard,Sonja Veljovic-Jovanovic,P. J. Verrier,Graham Noctor,Christine H. Foyer +7 more
TL;DR: In this article, the authors used the vtc1 mutant to provide a molecular signature for vitamin C deficiency in plants and showed that 171 genes are expressed differentially in the mutant compared with the wild type and transcript changes indicate that growth and development are constrained by the modulation of abscisic acid signaling.
Journal ArticleDOI
Molecular criteria for genus and species discrimination within the family Potyviridae
TL;DR: A phylogenetic analysis of the optimised nucleotide (nt) alignment of the entire ORFs of each fully-sequenced species in the family Potyviridae provided strong support for several subgroups within the genus Potyvirus, suggesting that the continuum of variation that is theoretically available is constrained or disrupted by molecular barriers that must have some biological significance.