C
Charles Boone
Researcher at University of Toronto
Publications - 314
Citations - 46014
Charles Boone is an academic researcher from University of Toronto. The author has contributed to research in topics: Gene & Synthetic genetic array. The author has an hindex of 100, co-authored 294 publications receiving 42217 citations. Previous affiliations of Charles Boone include Canadian Institute for Advanced Research & Queen's University.
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Journal ArticleDOI
Global Gene Deletion Analysis Exploring Yeast Filamentous Growth
Owen Ryan,Rebecca S. Shapiro,Christoph F. Kurat,David Mayhew,Anastasia Baryshnikova,Brian L. Chin,Zhen-Yuan Lin,Michael J. Cox,Frederick S. Vizeacoumar,Doris Cheung,Sondra Bahr,Kyle Tsui,Faiza Tebbji,Faiza Tebbji,Adnane Sellam,Adnane Sellam,Fabian Istel,Tobias Schwarzmüller,Todd B. Reynolds,Karl Kuchler,David K. Gifford,David K. Gifford,Malcolm Whiteway,Malcolm Whiteway,Guri Giaever,Corey Nislow,Michael Costanzo,Anne-Claude Gingras,Anne-Claude Gingras,Robi D. Mitra,Brenda J. Andrews,Gerald R. Fink,Gerald R. Fink,Leah E. Cowen,Charles Boone +34 more
TL;DR: This work constructed a genome-wide set of targeted deletion alleles and introduced them into a filamentous S. cerevisiae strain and identified genes involved in morphologically distinct forms of filamentation: haploid invasive growth, biofilm formation, and diploid pseudohyphal growth.
Journal ArticleDOI
Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiae interaction network
Lan V. Zhang,Oliver D. King,Sharyl L. Wong,Debra S. Goldberg,Amy Hin Yan Tong,Guillaume Lesage,Brenda J. Andrews,Howard Bussey,Charles Boone,Frederick P. Roth +9 more
TL;DR: An integrated Saccharomyces cerevisiae interaction network is assembled in which nodes represent genes (or their protein products) and differently colored links represent the aforementioned five biological interaction types and it is shown that most of the motifs form 'network themes' – classes of higher-order recurring interconnection patterns that encompass multiple occurrences of network motifs.
Journal ArticleDOI
Identifying transcription factor functions and targets by phenotypic activation.
Gordon Chua,Quaid Morris,Richelle Sopko,Mark D. Robinson,Owen Ryan,Esther T. Chan,Brendan J. Frey,Brenda J. Andrews,Charles Boone,Timothy P. Hughes +9 more
TL;DR: A generic strategy for identifying genes and pathways induced by individual TFs that does not require knowledge of their normal activation cues is described, presenting a straightforward approach to discovery of TF activities and mapping targets that could be adapted to any organism with transgenic technology.
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Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes
Scott J. Dixon,Yaroslav Fedyshyn,Judice L. Y. Koh,T. S. Keshava Prasad,Charly Chahwan,Gordon Chua,Kiana Toufighi,Anastasija Baryshnikova,Jacqueline Hayles,Kwang Lae Hoe,Dong-Uk Kim,Han Oh Park,Chad L. Myers,Akhilesh Pandey,Daniel Durocher,Brenda J. Andrews,Charles Boone +16 more
TL;DR: A conserved yeast network (CYN) is defined composed of 106 genes and 144 interactions and it is suggested that this network may help understand the shared biology of diverse eukaryotic species.
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Bayesian Modeling of the Yeast SH3 Domain Interactome Predicts Spatiotemporal Dynamics of Endocytosis Proteins
Raffi Tonikian,Xiaofeng Xin,Christopher P. Toret,David Gfeller,Christiane Landgraf,Simona Panni,Simona Panni,Serena Paoluzi,Luisa Castagnoli,Bridget Currell,Somasekar Seshagiri,Haiyuan Yu,Barbara Winsor,Marc Vidal,Mark Gerstein,Gary D. Bader,Rudolf Volkmer,Gianni Cesareni,David G. Drubin,Philip M. Kim,Sachdev S. Sidhu,Charles Boone +21 more
TL;DR: A genome-scale specificity and interaction map for yeast SH3 domain-containing proteins reveal how family members show selective binding to target proteins and predicts the dynamic localization of new candidate endocytosis proteins.