R
Rajesh Raju
Researcher at Yenepoya University
Publications - 63
Citations - 7756
Rajesh Raju is an academic researcher from Yenepoya University. The author has contributed to research in topics: Signal transduction & Medicine. The author has an hindex of 25, co-authored 51 publications receiving 6733 citations. Previous affiliations of Rajesh Raju include Rajiv Gandhi Centre for Biotechnology & Kuvempu University.
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Human Protein Reference Database—2009 update
T. S. Keshava Prasad,Renu Goel,Kumaran Kandasamy,Kumaran Kandasamy,Shivakumar Keerthikumar,Sameer Kumar,Suresh Mathivanan,Deepthi Telikicherla,Rajesh Raju,Beema Shafreen,Abhilash K. Venugopal,Lavanya Balakrishnan,Arivusudar Marimuthu,Sutopa Banerjee,Devi S. Somanathan,Aimy Sebastian,Sandhya G. Rani,Somak Ray,C. J. Harrys Kishore,Sashi Kanth,Mukhtar Ahmed,Manoj Kumar Kashyap,Manoj Kumar Kashyap,Riaz Mohmood,Y. L. Ramachandra,Venkatarangaiah Krishna,B. Abdul Rahiman,Subburaman Mohan,Prathibha Ranganathan,Subhashri Ramabadran,Raghothama Chaerkady,Akhilesh Pandey +31 more
TL;DR: A number of new features in HPRD are added, including PhosphoMotif Finder, which allows users to find the presence of over 320 experimentally verified phosphorylation motifs in proteins of interest, and a protein distributed annotation system—Human Proteinpedia.
Journal ArticleDOI
A draft map of the human proteome
Min-Sik Kim,Sneha M. Pinto,Derese Getnet,Raja Sekhar Nirujogi,Srikanth S. Manda,Raghothama Chaerkady,Anil K. Madugundu,Dhanashree S. Kelkar,Ruth Isserlin,Shobhit Jain,Joji Kurian Thomas,Babylakshmi Muthusamy,Pamela Leal-Rojas,Pamela Leal-Rojas,Praveen Kumar,Nandini A. Sahasrabuddhe,Lavanya Balakrishnan,Jayshree Advani,Bijesh George,Santosh Renuse,Lakshmi Dhevi N. Selvan,Arun H. Patil,Vishalakshi Nanjappa,Aneesha Radhakrishnan,Samarjeet Prasad,Tejaswini Subbannayya,Rajesh Raju,Manish Kumar,Sreelakshmi K. Sreenivasamurthy,Arivusudar Marimuthu,Gajanan Sathe,Sandip Chavan,Keshava K. Datta,Yashwanth Subbannayya,Apeksha Sahu,Soujanya D. Yelamanchi,Savita Jayaram,Pavithra Rajagopalan,Jyoti Sharma,Krishna R Murthy,Nazia Syed,Renu Goel,Aafaque Ahmad Khan,Sartaj Ahmad,Gourav Dey,Keshav Mudgal,Aditi Chatterjee,Tai-Chung Huang,Jun Zhong,Xinyan Wu,Patrick G. Shaw,Donald Freed,Muhammad Saddiq Zahari,Kanchan K Mukherjee,Subramanian Shankar,Anita Mahadevan,Henry H N Lam,Chris J. Mitchell,Susarla K. Shankar,Parthasarathy Satishchandra,John T. Schroeder,Ravi Sirdeshmukh,Anirban Maitra,Steven D. Leach,Charles G. Drake,Marc K. Halushka,T. S. Keshava Prasad,Ralph H. Hruban,Candace L. Kerr,Candace L. Kerr,Gary D. Bader,Christine A. Iacobuzio-Donahue,Harsha Gowda,Akhilesh Pandey +73 more
TL;DR: A draft map of the human proteome is presented using high-resolution Fourier-transform mass spectrometry to discover a number of novel protein-coding regions, which includes translated pseudogenes, non-c coding RNAs and upstream open reading frames.
Journal ArticleDOI
NetPath: a public resource of curated signal transduction pathways
Kumaran Kandasamy,Subburaman Mohan,Rajesh Raju,Shivakumar Keerthikumar,Ghantasala S. Sameer Kumar,Abhilash K. Venugopal,Deepthi Telikicherla,Daniel J. Navarro,Suresh Mathivanan,Christian Pecquet,Sashi Kanth Gollapudi,Sudhir Gopal Tattikota,Shyam Mohan,Hariprasad Padhukasahasram,Yashwanth Subbannayya,Renu Goel,Harrys K.C. Jacob,Jun Zhong,Raja Sekhar,Vishalakshi Nanjappa,Lavanya Balakrishnan,Roopashree Subbaiah,Y. L. Ramachandra,B. Abdul Rahiman,T. S. Keshava Prasad,Jian Xin Lin,Jon C. D. Houtman,Stephen Desiderio,Jean-Christophe Renauld,Stefan N. Constantinescu,Osamu Ohara,Toshio Hirano,Masato Kubo,S. Singh,Purvesh Khatri,Sorin Draghici,Gary D. Bader,Gary D. Bader,Chris Sander,Warren J. Leonard,Akhilesh Pandey +40 more
TL;DR: NetPath provides detailed maps of a number of immune signaling pathways, which include approximately 1,600 reactions annotated from the literature and more than 2,800 instances of transcriptionally regulated genes - all linked to over 5,500 published articles.
Journal ArticleDOI
Plasma Proteome Database as a resource for proteomics research: 2014 update
Vishalakshi Nanjappa,Joji Kurian Thomas,Arivusudar Marimuthu,Babylakshmi Muthusamy,Aneesha Radhakrishnan,Rakesh Sharma,Aafaque Ahmad Khan,Lavanya Balakrishnan,Nandini A. Sahasrabuddhe,Satwant Kumar,Binit N Jhaveri,Kaushal V. Sheth,Ramesh Kumar Khatana,Patrick G. Shaw,S Srikanth,Premendu P. Mathur,Subramanian Shankar,Dindagur Nagaraja,Rita Christopher,Suresh Mathivanan,Rajesh Raju,Ravi Sirdeshmukh,Aditi Chatterjee,Richard J. Simpson,H. C. Harsha,Akhilesh Pandey,T. S. Keshava Prasad,T. S. Keshava Prasad +27 more
TL;DR: The latest version of the database also incorporates mass spectrometry-derived data including experimentally verified proteotypic peptides used for multiple reaction monitoring assays and a batch-based query designated Plasma Proteome Explorer, which will permit the users in screening a list of proteins or peptides against known plasma proteins to assess novelty of their data set.
Journal ArticleDOI
VEGF-A/VEGFR2 signaling network in endothelial cells relevant to angiogenesis
TL;DR: This work has developed the first comprehensive map of endothelial cell-specific signaling events of VEGFA/VEGFR2 system pertaining to angiogenesis and believes that this map would serve as a novel platform for reference, integration, and representation and more significantly, the progressive analysis of dynamic features of V EGF signaling in endothelial cells including their cross-talks with other ligand-receptor systems involved inAngiogenesis.