S
Stephen R. Quake
Researcher at Stanford University
Publications - 626
Citations - 89247
Stephen R. Quake is an academic researcher from Stanford University. The author has contributed to research in topics: Transcriptome & Biology. The author has an hindex of 132, co-authored 589 publications receiving 77778 citations. Previous affiliations of Stephen R. Quake include Agency for Science, Technology and Research & Allegheny Health Network.
Papers
More filters
Journal ArticleDOI
Single Cell Transcriptomes Derived from Human Cervical and Uterine Tissue during Pregnancy.
Winston Koh,Angela Ruohao Wu,Lolita Penland,Barbara Treutlein,Norma F. Neff,Gary L. Mantalas,Yair J. Blumenfeld,Yasser Y. El-Sayed,David K.M.D. Stevenson,Gary M. Shaw,Stephen R. Quake +10 more
TL;DR: This work presents the workflow for generating single cell transcriptomes derived from primary human uterine and cervical tissue obtained during planned cesarean hysterectomies and validation of the inferred cell identity is demonstrated via meta‐analysis of independent repositories in literature generated by bulk sequenced data of fluorescence‐activated cell sorting sorted cells.
Patent
Methods and systems for analysis of single cells
Michael F. Clarke,Stephen R. Quake,Piero Dalerba,Huiping Liu,Anne A Leyrat,Tomer Kalisky,Maximilian Diehn,Michael E. Rothenberg,Jianbin Wang,Neethan A. Lobo +9 more
TL;DR: In this article, methods for diagnosis and prognosis of disease by analyzing expression of a set of genes obtained from single cell analysis are provided. But they do not consider the effects of mutations and/or pathways in disease-state cells.
Journal ArticleDOI
Risky Business: Meeting the Structural Needs of Transdisciplinary Science
Paul H. Wise,Paul H. Wise,Gary M. Shaw,Maurice L. Druzin,Gary L. Darmstadt,Cecele C. Quaintance,Elina Mäkinen,David A. Relman,Stephen R. Quake,Atul J. Butte,Martin S. Angst,Louis J. Muglia,George Macones,Deborah Driscoll,Carole Ober,Joe Leigh Simpson,Michael Katz,Jennifer L. Howse,David K. Stevenson +18 more
TL;DR: Author(s): Wise, Paul H; Shaw, Gary M; Druzin, Maurice L; Darmstadt, Gary L; Quaintance, Cecele; Makinen, Elina; Relman, David A; Quake, Stephen R; Butte, Atul J; Angst, Martin S; Muglia, Louis J; Macones, George; Driscoll, Deborah; Ober, Carole; Simpson, Joe Leigh; Katz, Michael; Howse, Jennifer
Journal ArticleDOI
Microbial communities of Auka hydrothermal sediments shed light on vent biogeography and the evolutionary history of thermophily
Daan R. Speth,Feiqiao Brian Yu,Stephanie A. Connon,Sujung Lim,John S. Magyar,M.E. Peña-Salinas,Stephen R. Quake,Victoria J. Orphan +7 more
TL;DR: The authors used environmental metagenomics combined with analysis of physicochemical data and 16S rRNA gene amplicons to characterize the sediment-hosted microorganisms at the recently discovered Auka vents in the Gulf of California.
Journal ArticleDOI
Sizing Up Cell-Free DNA
TL;DR: Although great effort has been expended to understand how the relative concentrations of these DNA species may correlate with health, their greatest value has been to measure the proportion of foreign genomes within an individual.