T
Tao Liu
Researcher at Roswell Park Cancer Institute
Publications - 17
Citations - 2442
Tao Liu is an academic researcher from Roswell Park Cancer Institute. The author has contributed to research in topics: Chemistry & Medicine. The author has an hindex of 7, co-authored 14 publications receiving 2068 citations. Previous affiliations of Tao Liu include Ocean University of China & Zhejiang University.
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Journal ArticleDOI
Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude
Xin Yi,Yu Liang,Emilia Huerta-Sanchez,Xin Jin,Zha Xi Ping Cuo,John E. Pool,John E. Pool,Xun Xu,Hui Jiang,Nicolas Vinckenbosch,Thorfinn Sand Korneliussen,Hancheng Zheng,Tao Liu,Weiming He,Kui Li,Ruibang Luo,Xifang Nie,Honglong Wu,Meiru Zhao,Hongzhi Cao,Jing Zou,Ying Shan,Shuzheng Li,Qi Yang,Asan,Peixiang Ni,Geng Tian,Junming Xu,Xiao Liu,Tao Jiang,Renhua Wu,Guangyu Zhou,Meifang Tang,Junjie Qin,Tong Wang,Shuijian Feng,Guohong Li,Huasang,Jiangbai Luosang,Wei Wang,Fang Chen,Yading Wang,Xiaoguang Zheng,Zhuo Li,Zhuoma Bianba,Ge Yang,Xiznping Wang,Shuhui Tang,Guoyi Gao,Yong Chen,Zhen Luo,Lamu Gusang,Zheng Cao,Qinghui Zhang,Wei-Han OuYang,Xiaoli Ren,Huiqing Liang,Huisong Zheng,Yebo Huang,Jingxiang Li,Lars Bolund,Karsten Kristiansen,Yingrui Li,Yong Zhang,Xiuqing Zhang,Ruiqiang Li,Songgang Li,Huanming Yang,Rasmus Nielsen,Rasmus Nielsen,Jun Wang,Jing Wang +71 more
TL;DR: A population genomic survey has revealed a functionally important locus in genetic adaptation to high altitude, and the strongest signal of natural selection came from endothelial Per-Arnt-Sim domain protein 1 (EPAS1), a transcription factor involved in response to hypoxia.
Journal ArticleDOI
TreeFam: a curated database of phylogenetic trees of animal gene families
Heng Li,Avril Coghlan,Jue Ruan,Lachlan J. M. Coin,Jean-Karim Hériché,Lara Osmotherly,Ruiqiang Li,Tao Liu,Zhang Zhang,Lars Bolund,Gane Ka-Shu Wong,Wei-Mou Zheng,Paramvir S. Dehal,Jun Wang,Richard Durbin +14 more
TL;DR: Release 1.1 of TreeFam contains curated trees for 690 families and automatically generated trees for another 11 646 families, which represent over 128 000 genes from nine fully sequenced animal genomes and over 45’000 other animal proteins from UniProt.
Journal ArticleDOI
TreeFam: 2008 Update
Jue Ruan,Heng Li,Zhongzhong Chen,Avril Coghlan,Lachlan J. M. Coin,Yiran Guo,Jean-Karim Hériché,Yafeng Hu,Karsten Kristiansen,Ruiqiang Li,Tao Liu,Alan M. Moses,Junjie Qin,Søren Vang,Albert J. Vilella,Abel Ureta-Vidal,Lars Bolund,Jun Wang,Richard Durbin +18 more
TL;DR: Release 4.0 of TreeFam contains curated trees for 1314 families and automatically generated trees for another 14 351 families, and introduces more accurate approaches for automatically grouping genes into families, for building phylogenetic trees, and for inferring orthologues and paralogues.
Journal ArticleDOI
Integrative analyses of single-cell transcriptome and regulome using MAESTRO.
Chenfei Wang,Dongqing Sun,Xin Huang,Changxin Wan,Ziyi Li,Ya Han,Qian Qin,Jingyu Fan,Xintao Qiu,Yingtian Xie,Clifford A. Meyer,Myles Brown,Ming Tang,Henry W. Long,Tao Liu,X. Shirley Liu +15 more
TL;DR: Model-based AnalysEs of Transcriptome and RegulOme (MAESTRO), a comprehensive open-source computational workflow for the integrative analyses of single-cell RNA-seq and ATAC-seq data from multiple platforms, is presented.
Journal ArticleDOI
Diversity of ABC transporter genes across the plant kingdom and their potential utility in biotechnology
Thomas Lane,Caroline S. Rempe,Jack Davitt,Margaret Staton,Yanhui Peng,Douglas E. Soltis,Douglas E. Soltis,Michael Melkonian,Michael K. Deyholos,Jim Leebens-Mack,Mark W. Chase,Mark W. Chase,Carl J. Rothfels,Dennis W. Stevenson,Sean W. Graham,Jun Yu,Tao Liu,J. Chris Pires,Patrick P. Edger,Yong Zhang,Yinlong Xie,Yinlong Xie,Ying Zhu,Eric J. Carpenter,Gane Ka-Shu Wong,C. Neal Stewart +25 more
TL;DR: The ATP-binding cassette (ABC) transporter gene superfamily is ubiquitous among extant organisms and prominently represented in plants as mentioned in this paper, and plants appear to harbor the highest diversity of ABC transporter genes compared with any other group of organisms.