V
Vidya Venkatraman
Researcher at Cedars-Sinai Medical Center
Publications - 46
Citations - 1460
Vidya Venkatraman is an academic researcher from Cedars-Sinai Medical Center. The author has contributed to research in topics: Medicine & Proteome. The author has an hindex of 16, co-authored 38 publications receiving 1100 citations. Previous affiliations of Vidya Venkatraman include Johns Hopkins University & Johns Hopkins University School of Medicine.
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Journal ArticleDOI
The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations
Alexandra B Keenan,Sherry L. Jenkins,Kathleen M. Jagodnik,Simon Koplev,Edward He,Denis Torre,Zichen Wang,Anders B. Dohlman,Moshe C. Silverstein,Alexander Lachmann,Maxim V. Kuleshov,Avi Ma'ayan,Vasileios Stathias,Raymond Terryn,Daniel J. Cooper,Michele Forlin,Amar Koleti,Dusica Vidovic,Caty Chung,Stephan C. Schürer,Jouzas Vasiliauskas,Marcin Pilarczyk,Behrouz Shamsaei,Mehdi Fazel,Yan Ren,Wen Niu,Nicholas A. Clark,Shana White,Naim Al Mahi,Lixia Zhang,Michal Kouril,John F. Reichard,Siva Sivaganesan,Mario Medvedovic,Jaroslaw Meller,Rick J. Koch,Marc R. Birtwistle,Ravi Iyengar,Eric A. Sobie,Evren U. Azeloglu,Julia A. Kaye,Jeannette Osterloh,Kelly Haston,Jaslin Kalra,Steve Finkbiener,Jonathan Z. Li,Pamela Milani,Miriam Adam,Renan Escalante-Chong,Karen Sachs,Alexander LeNail,Divya Ramamoorthy,Ernest Fraenkel,Gavin Daigle,Uzma Hussain,Alyssa Coye,Jeffrey D. Rothstein,Dhruv Sareen,Loren Ornelas,Maria G. Banuelos,Berhan Mandefro,Ritchie Ho,Clive N. Svendsen,Ryan G. Lim,Jennifer Stocksdale,Malcolm Casale,Terri G. Thompson,Jie Wu,Leslie M. Thompson,Victoria Dardov,Vidya Venkatraman,Andrea Matlock,Jennifer E. Van Eyk,Jacob D. Jaffe,Malvina Papanastasiou,Aravind Subramanian,Todd R. Golub,Sean D. Erickson,Mohammad Fallahi-Sichani,Marc Hafner,Nathanael S. Gray,Jia-Ren Lin,Caitlin E. Mills,Jeremy L. Muhlich,Mario Niepel,Caroline E. Shamu,Elizabeth H. Williams,David Wrobel,Peter K. Sorger,Laura M. Heiser,Joe W. Gray,James E. Korkola,Gordon B. Mills,Mark A. LaBarge,Mark A. LaBarge,Heidi S. Feiler,Mark A. Dane,Elmar Bucher,Michel Nederlof,Damir Sudar,Sean M. Gross,David Kilburn,Rebecca Smith,Kaylyn Devlin,Ron Margolis,Leslie Derr,Albert Lee,Ajay Pillai +107 more
TL;DR: The LINCS program focuses on cellular physiology shared among tissues and cell types relevant to an array of diseases, including cancer, heart disease, and neurodegenerative disorders.
Journal ArticleDOI
Cysteine Oxidative Posttranslational Modifications: Emerging Regulation in the Cardiovascular System
Heaseung Sophia Chung,Sheng Bing Wang,Vidya Venkatraman,Christopher I. Murray,Jennifer E. Van Eyk +4 more
TL;DR: The various cysteine oxidative posttranslational modifications and their ability to function as redox-switches that regulate the cell's response to oxidative stimuli are reviewed.
Journal ArticleDOI
Proteomic Architecture of Human Coronary and Aortic Atherosclerosis.
David M. Herrington,Chunhong Mao,Sarah J. Parker,Zongming Fu,Guoqiang Yu,Lulu Chen,Vidya Venkatraman,Yi Fu,Yizhi Wang,Timothy D. Howard,Goo Jun,Caroline F. Zhao,Yongmei Liu,Georgia Saylor,Weston R. Spivia,Grace Athas,Dana Troxclair,James E. Hixson,Richard S. Vander Heide,Yue Wang,Jennifer E. Van Eyk +20 more
TL;DR: The human arterial proteome can be viewed as a complex network whose architectural features vary considerably as a function of anatomic location and the presence or absence of atherosclerosis.
Journal ArticleDOI
The Human Eye Proteome Project: perspectives on an emerging proteome.
TL;DR: A review of proteomic investigations of the human eye and a catalogue of 4842 nonredundant proteins identified in human eye tissues and biofluids to date highlights the need to identify new biomarkers for eye diseases using proteomics.
Journal ArticleDOI
Identification of a Set of Conserved Eukaryotic Internal Retention Time Standards for Data-Independent Acquisition Mass Spectrometry
Sarah J. Parker,Hannes L. Röst,Hannes L. Röst,George Rosenberger,George Rosenberger,Ben C. Collins,Lars Malmström,Dario Amodei,Vidya Venkatraman,Koen Raedschelders,Jennifer E. Van Eyk,Jennifer E. Van Eyk,Ruedi Aebersold,Ruedi Aebersold +13 more
TL;DR: A set of peptide sequences that are conserved across most eukaryotic species are identified, termed Common internal Retention Time standards (CiRT), which can be used alone or as a complement to SiRTs for RT normalization across peptide spectral libraries and in quantitative DIA-MS studies.