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Showing papers by "University of Antananarivo published in 2009"


Journal ArticleDOI
TL;DR: A modified GMYC model is developed that allows for a variable transition from coalescent to speciation among lineages and provides a method of species discovery and biodiversity assessment using single-locus data from mixed or environmental samples while building a globally available taxonomic database for future identifications.
Abstract: High-throughput DNA sequencing has the potential to accelerate species discovery if it is able to recognize evolutionary entities from sequence data that are comparable to species. The general mixed Yule-coalescent (GMYC) model estimates the species boundary from DNA surveys by identifying independently evolving lineages as a transition from coalescent to speciation branching patterns on a phylogenetic tree. Applied here to 12 families from 4 orders of insects in Madagascar, we used the model to delineate 370 putative species from mitochondrial DNA sequence variation among 1614 individuals. These were compared with data from the nuclear genome and morphological identification and found to be highly congruent (98% and 94%). We developed a modified GMYC that allows for a variable transition from coalescent to speciation among lineages. This revised model increased the congruence with morphology (97%), suggesting that a variable threshold better reflects the clustering of sequence data into biological species. Local endemism was pronounced in all 5 insect groups. Most species (60-91%) and haplotypes (88-99%) were found at only 1 of the 5 study sites (40-1000 km apart). This pronounced endemism resulted in a 37% increase in species numbers using diagnostic nucleotides in a population aggregation analysis. Sample sizes between 7 and 10 individuals represented a threshold above which there was minimal increase in genetic diversity, broadly agreeing with coalescent theory and other empirical studies. Our results from >1.4 Mb of empirical data suggest that the GMYC model captures species boundaries comparable to those from traditional methods without the need for prior hypotheses of population coherence. This provides a method of species discovery and biodiversity assessment using single-locus data from mixed or environmental samples while building a globally available taxonomic database for future identifications. (Biodiversity; coalescent; DNA barcoding; DNA taxonomy; endemism; GMYC; Madagascar; turnover.)

652 citations


Journal ArticleDOI
TL;DR: The limited evidence suggests that this species poses a serious threat to freshwater biodiversity and that it is likely to damage human livelihoods (through its impact on fishing and possibly rice agriculture) and action is needed to reduce the rate of spread.
Abstract: In 2007 an unusual crayfish found in food markets in the capital of Madagascar was preliminarily identified as Procambarus ‘Marmorkrebs’: a new world taxa and the only decapod known to reproduce by parthenogenesis. We present information on the identity, distribution and ecology of this recent invader and attempt to evaluate the threat it poses to Madagascar’s biodiversity and to livelihoods. The species appears to be currently limited to the area close to Antananarivo, but is being sold alive on major transport routes. We present molecular evidence of its taxonomic relationships and confirm that the Procambarus present in Madagascar is indeed the parthenogenic taxa. We investigate its reproductive ecology and find Procambarus ‘Marmorkrebs’ to have an extremely high fecundity; more than six times that of the native crayfish Astacoides. The limited evidence we have suggests that this species poses a serious threat to freshwater biodiversity and that it is likely to damage human livelihoods (through its impact on fishing and possibly rice agriculture). More research is urgently needed but in the meantime action is needed to reduce the rate of spread before it is too late.

146 citations


Journal ArticleDOI
TL;DR: In this article, the authors examine the frameworks being developed to co-manage coral reefs in Kenya and Madagascar and compare the degree to which these two frameworks contain 10 key design principles thought to be important for successful commons institutions.

113 citations


Journal ArticleDOI
TL;DR: Both essential oils exhibited higher MIC values towards Fusarium oxysporum than their respective pure major component, suggesting the occurrence of synergism or antagonism effects between the different oil constituents.

112 citations


Journal ArticleDOI
15 Jul 2009-Gene
TL;DR: To estimates the speciation dates within primates, the amino acid sequences of mt-proteins were analyzed with a Bayesian method of Thorne and Kishino and the biogeographic scenarios which have been proposed for the origin of strepsirrhini and for the dispersal of the lemuriformes and lorisiformes were reexamined.

111 citations


Journal ArticleDOI
TL;DR: Antananarivo has a higher density of dogs than many other urban areas in Africa and the dog population is unrestricted and inadequately vaccinated against rabies, which will enable targeted planning of rabies control efforts.
Abstract: Rabies is a widespread disease in African domestic dogs and a serious public health problem in developing countries. Canine rabies became established in Africa during the 20th century, coinciding with ecologic changes that favored its emergence in canids. This paper reports the results of a cross-sectional study of dog ecology in the Antananarivo urban community in Madagascar. A questionnaire survey of 1541 households was conducted in Antananarivo from October 2007 to January 2008. The study addressed both owned and unowned dogs. Various aspects of dog ecology were determined, including size of dog population, relationship between dogs and humans, rabies vaccination. Dog ownership was common, with 79.6 to 94.1% (mean 88.9%) of households in the six arrondissements owning dogs. The mean owned dog to person ratio was 1 dog per 4.5 persons and differed between arrondissements (administrative districts), with ratios of 1:6.0 in the first arrondissement, 1:3.2 persons in the 2nd, 1:4.8 in the 3rd, 1:5.2 in the 4th, 1:5.6 in the 5th and 1:4.4 in the 6th arrondissement. Overall, there were more male dogs (61.3%) and the male/female sex ratio was estimated to be 1.52; however, mature females were more likely than males to be unowned (OR: 1.93, CI 95%; 1.39

81 citations


Journal ArticleDOI
TL;DR: The first comprehensive spatiotemporal picture of Plasmodium falciparum resistance in various geographic areas in Madagascar showed unusual profiles of chloroquine susceptibility in Madagascar, a rapid rise in the frequency of parasites with both the pfdhfr and the pFDhps mutations and the progressive loss of the most susceptible isolates to artemisinin derivatives.
Abstract: The aim of this study was to provide the first comprehensive spatiotemporal picture of Plasmodium falciparum resistance in various geographic areas in Madagascar. Additional data about the antimalarial resistance in the neighboring islands of the Comoros archipelago were also collected. We assessed the prevalence of pfcrt, pfmdr-1, pfdhfr, and pfdhps mutations and the pfmdr-1 gene copy number in 1,596 P. falciparum isolates collected in 26 health centers (20 in Madagascar and 6 in the Comoros Islands) from 2006 to 2008. The in vitro responses to a panel of drugs by 373 of the parasite isolates were determined. The results showed (i) unusual profiles of chloroquine susceptibility in Madagascar, (ii) a rapid rise in the frequency of parasites with both the pfdhfr and the pfdhps mutations, (iii) the alarming emergence of the single pfdhfr 164L genotype, and (iv) the progressive loss of the most susceptible isolates to artemisinin derivatives. In the context of the implementation of the new national policy for the fight against malaria, continued surveillance for the detection of P. falciparum resistance in the future is required.

69 citations


Journal ArticleDOI
01 Jul 2009-Oryx
TL;DR: Results of semi-structured interviews and questionnaires in a lakeside town provide valuable insights into the reasons for the ongoing burning of vegetation in Lac Alaotra and should inform the management actions that are required to protect this globally important wetland.
Abstract: Lac Alaotra is Madagascar's largest lake and a recognized wetland of international importance under the Ramsar Convention. It supports several Critically Endangered species, including the Alaotran gentle lemur Hapalemur alaotrensis . A principal threat facing the remaining Alaotran wetland is anthropogenic burning of the vegetation during the dry season; a practice now officially banned. A number of reasons have been given to explain this but to date no attempt has been made to investigate the principal motivations for the burning. We present the results of semi-structured interviews (n = 27) and questionnaires (n = 122) in a lakeside town. Seventy-eight percent of interviewees stated wetland burning was performed only or mainly to gather an introduced fish, the Asian snakehead Channa maculata , which buries into the underlying substrate during the dry season. Sixty-eight percent of questionnaire respondents provided a similar explanation. These data provide valuable insights into the reasons for the ongoing burning and should inform the management actions that are required to protect this globally important wetland.

66 citations


Journal ArticleDOI
TL;DR: A hybrid zone in one of the few remaining ecotonal corridors between dry and humid forests in Madagascar is studied, which connects two species of mouse lemurs, Microcebus griseorufus in dry spiny forest andMicrocebus murinus in humid littoral forest, and reveals intermediate morphotypes of many individuals in transitional habitat.
Abstract: Hybrid zones in ecotones can be useful model systems for the study of evolutionary processes that shape the distribution and discreteness of species. Such studies could be important for an improved understanding of the complex biogeography of Madagascar, which is renowned for its outstanding degree of small-scale endemism. Certain forest remnants in central Madagascar indicate that transitional corridors across the island could have connected microendemics in different forest types in the past. Evolutionary processes in such corridors are difficult to study because most of these corridors have disappeared due to deforestation in central Madagascar. We studied a hybrid zone in one of the few remaining ecotonal corridors between dry and humid forests in Madagascar, which connects two species of mouse lemurs, Microcebus griseorufus in dry spiny forest and Microcebus murinus in humid littoral forest. We sampled 162 mouse lemurs at nine sites across this boundary. Morphometric analyses revealed intermediate morphotypes of many individuals in transitional habitat. Bayesian clustering of microsatellite genotypes and assignment tests yielded evidence for a mixed ancestry of mouse lemurs in the ecotone, where we also observed significant linkage disequilibria and heterozygote deficiency. In contrast to these observations, mitochondrial haplotypes displayed a sharply delimited boundary at the eastern edge of spiny forest, which was noncoincident with the signals from microsatellite data. Among several alternative scenarios, we propose asymmetric nuclear introgression due to male-biased dispersal, divergent environmental selection, and an expansion of dry spiny forest in the course of aridification as a probable explanation of our observations.

65 citations


Journal ArticleDOI
TL;DR: Conservation planners should consider predation as a potentially important proximate cause of extirpation in fragmented landscapes, even when resource density and quality could otherwise sustain populations.
Abstract: Predation is a constant risk for most primates, impacting demography, population dynamics, activity patterns and social behaviour. Data are limited on both the rates of predation and its spatial and temporal variability. We present long-term observations of Cryptoprocta ferox predation on rainforest sifakas in Madagascar, Propithecus diadema at Tsinjoarivo (22 group years) and Propithecus edwardsi at Ranomafana (73 group years), derived from intensive observations based on ongoing behavioural studies. Average per capita offtake rates are relatively low (0.06–0.07), but temporal variability is high (kills are clumped in time). This is consistent with Cryptoprocta ecology; individual home ranges are much larger than sifaka ranges, and individuals may hunt in a subsection of their range until prey density is decreased, then move on. These results have broad implications. First, in terms of the evolution of anti-predator strategies, it now becomes important to ask: (1) whether average or peak predation rates determine the strength of selection and (2) whether antipredator strategies (e.g. vigilance, sleeping site selection) fluctuate interannually, reflecting recent experience. Second, in terms of population ecology, Cryptoprocta may have disproportionately large impacts on the (small) sifaka groups, even driving groups to extinction (as observed at both sites). Third, the disappearance of groups has important implications for conservation. When this happens in continuous forest (as at Ranomafana), home ranges will likely be re-filled over time, whereas in isolated forest fragments (as at Tsinjoarivo), recolonization is less likely. Thus, conservation planners should consider predation as a potentially important proximate cause of extirpation in fragmented landscapes, even when resource density and quality could otherwise sustain populations. Considering the effects of predation can be useful in (1) decisions regarding the allocation of limited conservation resources, including which landscapes to invest resources in and (2) investigating ways to increase resilience of prey species.

57 citations


Journal ArticleDOI
TL;DR: This study identified three exclusive groups of dwarf lemur populations that correspond to three of the seven named species: C. major, C. medius and C. crossleyi, found to be genealogically exclusive in both mtDNA and nDNA loci and are morphologically distinguishable.
Abstract: Species are viewed as the fundamental unit in most subdisciplines of biology. To conservationists this unit represents the currency for global biodiversity assessments. Even though Madagascar belongs to one of the top eight biodiversity hotspots of the world, the taxonomy of its charismatic lemuriform primates is not stable. Within the last 25 years, the number of described lemur species has more than doubled, with many newly described species identified among the nocturnal and small-bodied cheirogaleids. Here, we characterize the diversity of the dwarf lemurs (genus Cheirogaleus) and assess the status of the seven described species, based on phylogenetic and population genetic analysis of mtDNA (cytb + cox2) and three nuclear markers (adora3, fiba and vWF). This study identified three distinct evolutionary lineages within the genus Cheirogaleus. Population genetic cluster analyses revealed a further layer of population divergence with six distinct genotypic clusters. Based on the general metapopulation lineage concept and multiple concordant data sets, we identify three exclusive groups of dwarf lemur populations that correspond to three of the seven named species: C. major, C. medius and C. crossleyi. These three species were found to be genealogically exclusive in both mtDNA and nDNA loci and are morphologically distinguishable. The molecular and morphometric data indicate that C. adipicaudatus and C. ravus are synonymous with C. medius and C. major, respectively. Cheirogaleus sibreei falls into the C. medius mtDNA clade, but in morphological analyses the membership is not clearly resolved. We do not have sufficient data to assess the status of C. minusculus. Although additional patterns of population differentiation are evident, there are no clear subdivisions that would warrant additional specific status. We propose that ecological and more geographic data should be collected to confirm these results.

Journal ArticleDOI
TL;DR: An ethnographic study of women's sex work in Antananarivo, Madagascar, examines how the meaning of women sex workers' sexual relationships could shift among 3 different forms of sex work to examine the influence of themeaning of sexual relationships on condom use for HIV prevention.
Abstract: Increasing evidence indicates that sex workers use condoms less consistently with regular (i.e., nonpaying) partners than with clients. Few studies have examined the extent to which these 2 categories are mutually exclusive. In an ethnographic study of women's sex work in Antananarivo, Madagascar, we examined how the meaning of women sex workers’ sexual relationships could shift among 3 different forms of sex work. Condom use was less likely in forms in which the distinction between client and lover (sipa in Malagasy) was fluid. For many sex workers, therefore, relationships they understood to be intimate imparted the greatest health vulnerability. It is important to examine the influence of the meaning of sexual relationships on condom use for HIV prevention. Policy implications for HIV prevention work with sex workers are considered.

Journal ArticleDOI
TL;DR: In this paper, the authors presented the first work for a climate classification of Madagascar island based on the meteorological data measured in different cities of this country and identified three major climatic zones are identified.

Journal ArticleDOI
TL;DR: In this article, the authors identify the contradictions between the political emergency of the biodiversity conservation effort and local development needs and demonstrate that an emergency approach to conservation is not conducive to the successful integration of conservation and development.
Abstract: At the 5th World Parks Congress, held in Durban, South Africa in 2003, the President of Madagascar committed his government to tripling the country’s protected zones over the next 5 years. The announcement reflected a desire to combine rapid conservation efforts with sustainable development. Conservationists in Madagascar focused their attention on the endemic baobab tree, Adansonia grandidieri. This paper aims to identify the contradictions between the political emergency of the biodiversity conservation effort and local development needs. Eighty-three semi-structured interviews were conducted in two villages near the protected area of “Baobab Alley” in the Menabe region. Malagasy conservationists believed the area’s protected status would benefit the local economy through eco-tourism. However, the conservation actions undertaken there display limited understanding of local dynamics and conflict with farmers’ needs. To protect the baobabs, the government has prohibited rice cultivation without providing compensation. We show that the multifunctional baobab tree is integrated into an agroforestry system and protected by farmers. Based on these results, we address the issue of how to combine conservation and local development objectives through the involvement of farmers and the recognition of local knowledge in tree management. We also demonstrate that an emergency approach to conservation is not conducive to the successful integration of conservation and development.

Journal ArticleDOI
TL;DR: Perturbation analyses from both the time-invariant and stochastic models indicate that recruitment and survival of older females are key determinants of population growth rate.
Abstract: In this study, we use deterministic and stochastic models to analyze the demography of Verreaux’s sifaka (Propithecus verreauxi verreauxi) in a fluctuating rainfall environment. The model is based on 16 years of data from Beza Mahafaly Special Reserve, southwest Madagascar. The parameters in the stage-classified life cycle were estimated using mark-recapture methods. Statistical models were evaluated using information-theoretic techniques and multi-model inference. The highest ranking model is time-invariant, but the averaged model includes rainfall-dependence of survival and breeding. We used a time-series model of rainfall to construct a stochastic demographic model. The time-invariant model and the stochastic model give a population growth rate of about 0.98. Bootstrap confidence intervals on the growth rates, both deterministic and stochastic, include 1. Growth rates are most elastic to changes in adult survival. Many demographic statistics show a nonlinear response to annual rainfall but are depressed when annual rainfall is low, or the variance in annual rainfall is high. Perturbation analyses from both the time-invariant and stochastic models indicate that recruitment and survival of older females are key determinants of population growth rate.

Journal ArticleDOI
TL;DR: Although difficult to determine the relative contributions of intra and intersexual selection on traits with dual benefits (both fighting and mate choice), both types of selection on body size and secondary sexual characters in these 2 chameleon species are documented.
Abstract: In polygynous mating systems, sexual selection can drive the evolution of male characters beneficial to winning fights for mates (intrasexual selection), for improving the mating success of males through mate choice (intersexual selection), or both. However, it may be difficult to disentangle the relative contributions of intra and intersexual selection on multiple traits that may be of dual utility. We used field arena trials to determine which morphological traits best explained male fighting ability and male mating success in 2 species of chameleons in Madagascar, Furcifer labordi and Furcifer verrucosus .I nF. labordi, male fighting success was best predicted by body size and size-corrected shorter rostral appendages and male mating success was best predicted by width of the rostral appendage and body size. In F. verrucosus, we found strong intrasexual selection for increased male body size and fewer counted dorsal cones, a trait that may correspond to increased age and experience. Although females in this species are generally passive toward courting males, male mating success with potentially receptive females is highly variable. Fewer counted dorsal cones and larger size-corrected casque height best explained male mating success; traits that may be selected by the female and/or correlated with increased age and experience. Although difficult to determine the relative contributions of intra and intersexual selection on traits with dual benefits (both fighting and mate choice), we documented both types of selection on body size and secondary sexual characters in these 2 chameleon species. Key words: Akaike information criterion, Furcifer labordi, Furcifer verrucosus, information-theoretic, mate choice. [Behav Ecol]

Journal ArticleDOI
15 Jan 2009-Geoderma
TL;DR: In this article, the authors measured the soil N 2 O fluxes and concentrations during the growing season of an intercropping maize-soybean on a clayey soil of the Malagasy Highlands.

Journal ArticleDOI
TL;DR: In this paper, surveys and monitoring of 37 caves in and around the Ankarana Special Reserve, northern Madagascar, yielded evidence of hunting of bats and potential disturbance of bats by miners and tourists, and colony counts for several bat species of potential conservation concern.
Abstract: Surveys and monitoring of 37 caves in and around the Ankarana Special Reserve, northern Madagascar, yielded evidence of hunting of bats and potential disturbance of bats by miners and tourists, and colony counts for several bat species of potential conservation concern. Colony size decreased by 95% and 14% for a colony of Hipposideros commersoni and a colony of Eidolon dupreanum, respectively, when recent evidence of hunting occurred at those colonies and those declines are probably attributable to hunting. Evidence of hunting occurred commonly at the roosts of those species and most commonly at the roosts of Rousettus madagascariensis. Hunting of pteropodids was associated with high vulnerability of roosts to hunters, little forest buffer between the cave and open savannah and the absence of tombs in the cave. Roost sites of the hunted species persisted for at least several years and this regularity may facilitate hunting. This work supports the ranking of E. dupreanum, R. madagascariensis and H. commersoni as species of conservation concern. Managers should consider the impact of tourist visits on bats and of increasing access to caves for tourism. Conservation efforts for the hunted species should also seek to protect vulnerable and unprotected cave roosts. Resume Des etudes et un suivi continu de 37 grottes dans la Reserve Speciale d’Ankarana et dans les environs, dans le nord de Madagascar, ont permis de recolter des preuves de la chasse aux chauves-souris et de l’eventuel derangement des chauves-souris par des mineurs et des touristes; et des comptes de colonies pour plusieurs especes dont le statut de conservation pourrait etre inquietant. La taille des colonies avait baisse de 95% et de 14% respectivement pour Hipposideros commersoni et pour Eidolon dupreanum, lorsque des preuves recentes de chasse sont apparues dans ces colonies; ces declins sont probablement dus a la chasse. Des preuves de chasse etaient regulierement presentes aux dortoirs de ces especes, et plus communes encore aux dortoirs de Rousettus madagascariensis. La chasse des pteropodides etait associee a une grande vulnerabilite des dortoirs face aux chasseurs, a une petite zone forestiere tampon entre la grotte et la savane ouverte, et a l’absence de tombes dans la grotte. Les sites de repos des especes chassees existaient depuis plusieurs annees au moins, et cette persistance pourrait faciliter la chasse. Ce travail soutient le classement de E. dupreanum, R. madagascariensis et H. commersoni parmi les especes dont le statut de conservation est inquietant. Les gestionnaires devraient considerer l’impact des visites de touristes sur les chauves-souris et de l’augmentation de l’acces aux grottes pour le tourisme. Les efforts de conservation des especes chassees devraient aussi viser a proteger les dortoirs dans des grottes vulnerables et non protegees.

Journal ArticleDOI
TL;DR: In this paper, a fine-scaled analysis revealed a characteristic ontogenetic pattern of cyanide accumulation in C. madagascariensis and showed a converse quantitative relation of protein concentrations in leaves to cyanide concentration in shoots at site-specific level.
Abstract: Giant bamboo (Cathariostachys madagascariensis) is a major food plant for three sympatric species of bamboo-eating lemurs (Hapalemur aureus, H. griseus, and Prolemur simus) in the rain forests of southeastern Madagascar. This plant species is strongly cyanogenic. However, quantitative data on cyanide concentration in C. madagascariensis are scarce. Previous studies reported 15 mg cyanide per 100 g fresh shoot material (corresponding to approx. 57 µmol cyanide per gram dry weight). However, we found mean concentrations (±SE) ranging from 139.3±19.32 in ground shoots to 217.7±16.80 µmol cyanide per gram dry weight in branch shoots. Thus, cyanogenesis of C. madagascariensis was up to four times higher than reported before. In contrast to the strongly cyanogenic shoots no cyanide could be detected in differently aged leaves of C. madagascariensis confirming earlier studies. Within individual shoots fine-scaled analysis revealed a characteristic ontogenetic pattern of cyanide accumulation. Highest concentrations were found in youngest parts near the apical meristem, whereas concentrations decreased in older shoot parts. Beyond the general intra-individual variability of cyanogenic features analyses indicated site-specific variability of both, the ontogenetic pattern of cyanide concentration as well as the total amount of cyanide accumulated in shoots. Additionally, analyses of soluble proteins—one important nutritive measure affecting food plant quality—demonstrated a converse quantitative relation of protein concentrations in leaves to cyanide concentration in shoots at the site-specific level. We, thus, suggest integrative analyses on quantitative variation of cyanogenesis together with nutritive plant parameters in future studies. This approach would allow obtaining more detailed insights into spatial variability of giant bamboo's overall browse quality and its impact on lemur herbivores. Am. J. Primatol. 71:305–315, 2009. © 2009 Wiley-Liss, Inc.

Journal ArticleDOI
TL;DR: In this article, the effect of an endogeic geophageous earthworm species on the soil P status was analyzed in two Malagasy Ferralsols and the results showed that the soil remained P deficient even in the presence of active and numerous earthworms.
Abstract: Low phosphorus (P) availability in Ferralsols of the Malagasy Highlands is a major limitation to crop growth. Direct seeding mulch-based cropping practices which were adopted in the region to improve and sustain soil fertility are known to favour earthworms’ presence. The mesocosm study aims to analyse the effect of an endogeic geophageous earthworm species on the soil P status. Total P content (P t), NaOH-extractable P content, P ions (Pi) concentration (C p) in solution and rapid and slow reactions of Pi in solution with solid phase were determined in two Malagasy Ferralsols. Both C p and reactions rates were assessed in laboratory batch experiments using 32Pi labelling and isotopic exchange kinetics (IEK). The P t values were 836 and 349 mg P g−1 in a clayey soil and a sandy–clayey soil, respectively. For both soils, NaOH-extractable organic P was significantly higher in earthworm casts than in parent soils, whereas Pt was unchanged. Also, the effect of earthworm ingestion significantly changed parameters of the IEK. In casts compared with the soil from which they were derived, the immediate isotopically exchangeable Pi (E 1 min) increased by 116%, whereas relative rates of Pi release at the solid-to-solution with time were slightly lowered. The effect of earthworm ingestion on IEK corresponded to a transfer of slowly exchangeable Pi towards quicker Pi pools of exchange. However, according to the literature, the increase in E 1 min remained below the critical level for optimal growth, stating that the soils remained P-deficient even in the presence of active and numerous earthworms.

Journal ArticleDOI
TL;DR: Th Thin blood films from 947 birds, belonging to 26 families and 64 species, were examined by light microscopy to determine the prevalence of blood parasites in Madagascar and add to the current knowledge of avian parasitism in Madagascar.
Abstract: Madagascar has long been recognized for its unique and diverse biota. In particular, significant effort has been made to establish baseline population data to better conserve the endemic avifauna. During field expeditions between 1993 and 2004, birds were mist-netted at 11 different sites, at elevations from 60 m to 2,050 m above sea level. Data on endemic status, forest type, and habitat preference were recorded. Thin blood films from 947 birds, belonging to 26 families and 64 species, were examined by light microscopy to determine the prevalence of blood parasites. Of these 947 birds, 30.7% were infected by at least one species of blood parasite, 26.8% of which were infected by more than one species. Species of Haemoproteus were the most prevalent (17.4%), followed by microfilariae (11.0%), Leucocytozoon spp. (9.4%), Plasmodium spp. (1.9%), Trypanosoma spp. (0.9%), and Babesia spp. (0.2%). Species level identifications confirmed the presence of 47 species of hemosporidians and trypanosomes, which is notably high and mirrors the diversity of their avian hosts. Eleven (23.4%) of these parasite species were new to science and thought to be endemic to the island. Significant differences in prevalence were observed by sample site, forest type (humid vs. dry), and habitat preference. Birds from all elevational zones sampled were infected, although not all parasite genera were present in each zone. Four of the six endemic avian families or subfamilies (Bernieridae, Brachypteraciidae, Philepittinae [Eurylaimidae], and Vangidae) were sampled and found to be parasitized. Of the families with the largest sample sizes, the Zosteropidae and Ploceidae had the highest prevalence of infection (65.6% and 49.3%, respectively). The vectors of hematozoan parasites in Madagascar are currently unknown. These results add to the current knowledge of avian parasitism in Madagascar and are of particular interest for the conservation of endemic species, as well as threatened or endangered populations.

Journal ArticleDOI
TL;DR: A molecular phylogeny based on >2kb of both mitochondrial and nuclear DNA sequences indicates Zonosaurinae are monophyletic, arising from a single colonization event, likely from Africa to Madagascar in the Paleogene (Paleocene/early Eocene), with subsequent radiation.

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TL;DR: In this article, a suite of amphibole and biotite Ar-Ar geochronological data enables to retrace the thermochronogical evolution inside and outside the Angavo shear zone.

Journal ArticleDOI
TL;DR: It is shown that the abundance of D. gazella in local communities has no noticeable effect on the species composition in the remaining community, and nearly all species using cattle dung have maximally large geographic ranges across Madagascar.
Abstract: Malagasy dung beetles have evolved with a diverse group of primates (lemurs), the largest extant native herbivores on the island. The two main radiations include the endemic subtribe Helictopleurina (65 species) and the tribe Canthonini with several endemic genera (c. 170 species), both of which occur primarily in forests and feed on lemur faeces and carrion. Cattle were introduced to Madagascar about 1000 years ago, thereby establishing a completely new type of resource (cattle dung) for indigenous dung beetles. We report three striking patterns in the occurrence of dung beetles in cattle dung based on semi-quantitative sampling at nearly 80 localities across Madagascar. First, no dung beetles have shifted to use primarily cattle dung in wet forests, in contrast to other tropical regions, where ungulate dung is a key resource for dung beetles. Second, the community in open habitats includes 21 species (three Canthonini, six Helictopleurina, one Scarabaeini, four Onthophagini, six Aphodiini, and one Didactyliini), which is only a small fraction of the species number in comparable communities in mainland Africa. Third, nearly all species using cattle dung have maximally large geographic ranges across Madagascar, in marked contrast to relatively small ranges among forest-inhabiting species. This latter point applies also to four endemic Helictopleurina species, which have shifted to cattle dung in open areas and have subsequently expanded their ranges in comparison with their relatives inhabiting forests. The most numerous species in the community is the introduced Digitonthophagus gazella. We show that the abundance of D. gazella in local communities has no noticeable effect on the species composition in the remaining community.

Journal ArticleDOI
TL;DR: Molecular phylogenetic analysis uncovered an unexpected diversity of polystome species belonging to two separate clades: one forming a lineage within the genus Metapolystoma, with one species in Ptychadena and several species in the mantellid host genera Aglyptodactylus and Boophis; and an undescribed genus that was found in the species of the subfamily Mantellinae in the family Mantellidae.
Abstract: Polystomatid flatworms are parasites of high host specificity, which mainly infect amphibian hosts. Only one polystome species has so far been recorded from Madagascar despite the high species richness and endemicity of amphibians on this island. Out of the 86 screened Malagasy frog species, we recovered polystomes from 25 in the families Ptychadenidae and Mantellidae. Molecular phylogenetic analysis uncovered an unexpected diversity of polystome species belonging to two separate clades: one forming a lineage within the genus Metapolystoma , with one species in Ptychadena and several species in the mantellid host genera Aglyptodactylus and Boophis ; and the second corresponding to an undescribed genus that was found in the species of the subfamily Mantellinae in the family Mantellidae. The phylogenetic position of the undescribed genus along with molecular dating suggests that it may have colonized Madagascar in the Late Mesozoic or Early Cainozoic. By contrast, the more recent origin of Metapolystoma in Madagascar at ca 14–2 Myr ago strongly suggests that the ancestors of Ptychadena mascareniensis colonized Madagascar naturally by overseas dispersal, carrying their Metapolystoma parasites. Our findings provide a striking example of how parasite data can supply novel insights into the biogeographic history of their hosts.

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TL;DR: In this article, the authors examined patterns of morphological and genetic variation in Chaerephon leucogaster (family Molossidae) on Madagascar, Mayotte in the Comoros Archipelago, and the offshore Tanzanian island of Pemba.
Abstract: We examine patterns of morphological and genetic variation in Chaerephon leucogaster (family Molossidae) on Madagascar, Mayotte in the Comoros Archipelago, and the offshore Tanzanian island of Pemba. Five external, 10 cranial, and eight dental measurements of animals from different Malagasy populations (grouped according to bioclimatic regions) show differences in the degree of sexual dimorphism and size variation. Further, the population on Mayotte is largely identical in size to those from western Madagascar, and animals from Pemba are notably larger than those from Madagascar and Mayotte. Cytochrome b genetic distances across samples from these islands were low (maximum 0.0035) and animals from Pemba and Mayotte shared cytochrome b haplotypes with Malagasy bats. D-loop data showed some concordance between haplotype distribution, geographical position (latitude and island), and the bioclimatic zones. Animals from Pemba and Mayotte formed a unique D-loop haplotype, which was a minimum of six mutational steps different from Malagasy haplotypes. Within Madagascar, certain haplotypes were exclusive to the north (13°S latitude band) and arid southwest (22° and 23°S latitudes) regions. In general, there was no clear concordance between variation in haplotype distribution, latitude, altitude or gender. Where concordance occurred, the genetic distances involved were not sufficiently high to warrant the definition of new taxonomic units. Hence, based on current genetic information, patterns of morphological variation of the Madagascar populations and differences between Pemba and Mayotte/Madagascar are best explained as inter-population variation and may be adaptive, associated with different climatic regimes and associated ecological variables.

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TL;DR: Eotheroides lambondrano is a new species of sirenian collected from middle Eocene nearshore marine deposits in the Mahajanga Basin of northwestern Madagascar.
Abstract: The first diagnostic sirenian material from Madagascar and, more broadly, the first diagnostic pre-Pleistocene Cenozoic mammal material recovered from the island is reported. Eotheroides lambondrano is a new species of sirenian collected from middle Eocene nearshore marine deposits in the Mahajanga Basin of northwestern Madagascar. The recovered material consists of a nearly complete adult skull (including the first complete rostrum known for Eotheroides) and several portions of pachyosteosclerotic ribs. Diagnostic features of E. lambondrano include: primitive upper dental formula of 3.1.5.3, relatively large occlusal area of M2 and M3, long and narrow nasals, weak rostral deflection compared to other Eocene Dugongidae, well developed supraorbital processes, short infraorbital canal, anteroposteriorly short zygomatic-orbital bridge of maxilla, and a palate that is narrow anteriorly, creating a strongly bell-shaped maxillary dental arcade. The cranium of E. lambondrano is similar to that of E. aeg...

Journal ArticleDOI
TL;DR: A 6‐step scoring system for coat and tail condition, ranging from perfectly fluffy to half or more of body and tail being hairless, is offered for wild L. catta and can also be of value for other species.
Abstract: Coat condition can be influenced by a wide variety of disorders and thus provides a useful tool for noninvasive health and welfare assessments in wild and captive animals. Using Lemur catta as an exemplar, we offer a 6-step scoring system for coat and tail condition, ranging from perfectly fluffy to half or more of body and tail being hairless. The categories are described in detail and illustrated with sample pictures from a wild population in Berenty Reserve, Madagascar. Furthermore, we elaborate on intermediate conditions and discoloration of fur. Coat condition scoring allows the comparison between years, seasons, and the effect of toxin, disease or stress. Although this system was developed for wild L. catta, we believe it can also be of value for other species. We recommend scoring coat condition in healthy wild mammal populations to give a baseline on yearly and seasonal variations vs. deteriorating health conditions or pathology. Am. J. Primatol. 71:183–190, 2009. © 2009 Wiley-Liss, Inc.

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TL;DR: The Ianapera emerald mine is located in the Neoproterozoic Vohibory Block of southern Madagascar as mentioned in this paper, where the pegmatite veins are intruded by metasomatic phlogopite veins, and bodies developed within the mafic/ultramafic rocks.
Abstract: The Ianapera emerald deposit is located in the Neoproterozoic Vohibory Block of southern Madagascar. The local geology consists of intercalated migmatitic gneissic units and calcareous metasedimentary rocks, containing boudinaged metamorphosed mafic/ultramafic lenses, all intruded by pegmatite veins. These units occur near the hinge of the tightly folded Ianapera antiform, within a few kilometers of the Ampanihy shear zone. Emerald mineralization is hosted by metasomatic phlogopite veins, and bodies developed within the mafic/ultramafic rocks. Based on field and textural relationships, we distinguish proximal and distal styles of mineralization. Proximal mineralization occurs at the contact of pegmatite veins with mafic/ultramafic units; in the distal style, pegmatites are not observed. Three types of emeralds could be distinguished, mainly on the basis of color and mineral zoning. Some of these emeralds have the most Al-depleted and Cr-rich composition ever recorded. Another characteristic feature to the Ianapera deposit and, to our knowledge, yet unreported, is the association of some emeralds with scapolite in metasomatised mafic rocks. Mineral inclusions are common in most emeralds and include phlogopite, carbonates, barite, K-feldspar, quartz, pyrite, zircon, monazite, bastnaesite, phenakite, plus Fe and Cr oxides. However, feldspar and rare earth element-bearing minerals occur predominantly in proximal emeralds, which also have a more incompatible trace-element signature than distal emeralds. We propose a model related to syn- to post-tectonic magmatic-hydrothermal activity. Pegmatitic bodies intruded units of the Ianapera antiform probably during tectonic relaxation. Exsolution of fluids rich in halogens and incompatible elements from the cooling pegmatites caused hydrothermal metasomatism of Cr-bearing mafic/ultramafic rocks in direct contact with the pegmatites. Local fracturing favored fluid infiltration, permitting the formation of distal mineralization. Emerald composition was controlled by the chemistry of the host rock. The presence of carbonate mineral inclusions in the emeralds and the high F-activity indicated by elevated F-contents in newly formed minerals suggest transport of Be as a fluoride-carbonate complex. It seems likely that beryl formation was triggered by precipitation of F-rich phlogopite, which removed the complexing ligand from the fluid.

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TL;DR: The diet of Grandidier's Vontsira Galidictis grandidieri is described, one of the rarest carnivorans in the world and restricted to an area of 400 km2 in the spiny forest of south-western Madagascar, where about 90% of all prey consumed had body masses below 10 g.
Abstract: We describe the diet of Grandidier's Vontsira Galidictis grandidieri (family Eupleridae), one of the rarest carnivorans in the world and restricted to an area of 400 km2 in the spiny forest of south-western Madagascar. From May 2006 to May 2007, 342 G. grandidieri scats were collected in the Parc National de Tsimanampetsotsa – 256 faecal samples in the dry season and 86 in the wet season. In total, 886 prey items were identified from these scats. Invertebrates (principally large cockroaches of the genus Gromphadorhina) were the most frequently eaten prey. Even though vertebrates comprised only 8 and 17% of prey individuals in the diet of G. grandidieri during the dry and wet seasons, they contributed 58 and 80% of the prey biomass in each season, respectively. About 90% of all prey consumed had body masses below 10 g. This is well below the weight of the prey consumed by Cryptoprocta ferox, the only native carnivoran occurring in sympatry with G. grandidieri, making competition for food between the two species unlikely.