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Journal ArticleDOI

Human PEX1 is mutated in complementation group 1 of the peroxisome biogenesis disorders

TLDR
Human PEX1 has been identified by computer-based ‘homology probing’ using the ScPexlp sequence to screen databases of expressed sequence tags (dbEST) for human cDNA clones and expresses a 147-kD member of the AAA protein family (ATPases associated with diverse cellular activities).
Abstract
Human peroxisome biogenesis disorders (PBDs) are a group of genetically heterogeneous autosomal-recessive diseases caused by mutations in PEX genes that encode peroxins, proteins required for peroxisome biogenesis. These lethal diseases include Zellweger syndrome (ZS), neonatal adrenoleukodystro-phy (NALD) and infantile Refsum's disease (IRD)1, three pheno-types now thought to represent a continuum of clinical features that are most severe in ZS, milder in NALD and least severe in IRD2. At least eleven PBD complementation groups have been identified by somatic-cell hybridization analysis2–6 compared to the eighteen PEX complementation groups that have been found in yeast. We have cloned the human PEX1 gene encoding a 147-kD member of the AAA protein family (ATPases associated with diverse cellular activities)7, which is the putative orthologue of Saccharomyces cerevisiae Pexlp (ScPexlp). Human PEX1 has been identified by computer-based ‘homology probing’ using the ScPexlp sequence to screen databases of expressed sequence tags (dbEST) for human cDNA clones. Expression of PEX1 rescued the cells from the biogenesis defect in human fibroblasts of complementation group 1 (CG1), the largest PBD complementation group. We show that PEX1 is mutated in CG1 patie

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Journal ArticleDOI

Initial sequencing and analysis of the human genome.

Eric S. Lander, +248 more
- 15 Feb 2001 - 
TL;DR: The results of an international collaboration to produce and make freely available a draft sequence of the human genome are reported and an initial analysis is presented, describing some of the insights that can be gleaned from the sequence.
Journal ArticleDOI

Peroxisome biogenesis disorders.

TL;DR: Studies of the cellular and molecular defects in PBD patients have contributed significantly to the understanding of the role of each PEX gene in peroxisome assembly.
Journal ArticleDOI

Identifying Relationships among Genomic Disease Regions: Predicting Genes at Pathogenic SNP Associations and Rare Deletions

TL;DR: A statistical method that takes a list of disease regions and automatically assesses the degree of relatedness of implicated genes using 250,000 PubMed abstracts, and offers a statistically robust approach to identifying functionally related genes from across multiple disease regions—that likely represent key disease pathways.
Journal ArticleDOI

Peroxisome biogenesis disorders: genetics and cell biology.

TL;DR: How studies of human PEX genes, their protein products and PBD cell lines are shaping current models of peroxisome biogenesis is discussed.
Journal ArticleDOI

Stress induces peroxisome biogenesis genes

TL;DR: A model in which various stress situations that lead to the production of hydrogen peroxide can be ameliorated by elaboration of the peroxisome compartment to assist in restoration of the cellular redox balance is proposed.
References
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Basic Local Alignment Search Tool

TL;DR: A new approach to rapid sequence comparison, basic local alignment search tool (BLAST), directly approximates alignments that optimize a measure of local similarity, the maximal segment pair (MSP) score.
Journal ArticleDOI

A simple salting out procedure for extracting DNA from human nucleated cells

TL;DR: A rapid, safe and inexpensive method was developed to simplify the deprotein-ization procedure that yielded quantities comparable to those obtained from phenol-chloroform extractions, rendering the entire process of RFLP analysis free of toxic materials.
Book

The Metabolic and Molecular Bases of Inherited Disease

TL;DR: In this paper, the authors present a list of disorders of MITOCHONDRIAL FUNCTION, including the following: DISORDERS OF MIOCHONDRIC FERTILITY XIX, XVI, XIX.
Journal ArticleDOI

Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes.

TL;DR: By analyzing the effects of single base substitutions around the ATG initiator codon in a cloned preproinsulin gene, ACCATGG is identified as the optimal sequence for initiation by eukaryotic ribosomes.
Journal ArticleDOI

A novel, cleavable peroxisomal targeting signal at the amino-terminus of the rat 3-ketoacyl-CoA thiolase.

TL;DR: It is concluded that a novel PTS is identified that functions at amino‐terminal or internal locations and is distinct from the C-terminal PTS, which implies the existence of two different routes for targeting proteins into the peroxisomal matrix.
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