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Mixed Membership Stochastic Blockmodels

TLDR
In this article, the authors introduce a class of variance allocation models for pairwise measurements, called mixed membership stochastic blockmodels, which combine global parameters that instantiate dense patches of connectivity (blockmodel) with local parameters (mixed membership), and develop a general variational inference algorithm for fast approximate posterior inference.
Abstract
Consider data consisting of pairwise measurements, such as presence or absence of links between pairs of objects. These data arise, for instance, in the analysis of protein interactions and gene regulatory networks, collections of author-recipient email, and social networks. Analyzing pairwise measurements with probabilistic models requires special assumptions, since the usual independence or exchangeability assumptions no longer hold. Here we introduce a class of variance allocation models for pairwise measurements: mixed membership stochastic blockmodels. These models combine global parameters that instantiate dense patches of connectivity (blockmodel) with local parameters that instantiate node-specific variability in the connections (mixed membership). We develop a general variational inference algorithm for fast approximate posterior inference. We demonstrate the advantages of mixed membership stochastic blockmodels with applications to social networks and protein interaction networks.

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Tail Bounds for Matrix Quadratic Forms and Bias Adjusted Spectral Clustering in Multi-layer Stochastic Block Models

Jing Lei
TL;DR: A novel bias-adjusted spectral clustering method in multi-layer stochastic block models with general signal structures and a deviation bound for matrix-valued $U$-statistics of order two and their independent sums are established.
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Modelling and prediction of financial trading networks: An application to the NYMEX natural gas futures market

TL;DR: In this paper, the authors used a stochastic block model to describe the structure of the network during each period, and then linked multiple time periods using a hidden Markov model.
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Multiresolution Tensor Decomposition for Multiple Spatial Passing Networks

Shaobo Han, +1 more
- 03 Mar 2018 - 
TL;DR: This article focuses on developing methods for summarizing different team's passing strategies using a novel multiresolution data representation framework and Poisson nonnegative block term decomposition model, which automatically produces coarse-to-fine low-rank network motifs.
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Network Global Testing by Counting Graphlets

TL;DR: In this article, the authors construct a class of test statistics using the numbers of short paths and short cycles, and the key to their approach is a general framework for canceling the effects of degree heterogeneity.

Allocative Poisson Factorization for Computational Social Science

Aaron Schein
TL;DR: AllOCATIVE POISSON FACTORIZATION for COMPUTATIONAL SOCIAL SCIENCE as discussed by the authors is based at the University of Southern California, Los Angeles, CA. USA.
References
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Journal ArticleDOI

Gene Ontology: tool for the unification of biology

TL;DR: The goal of the Gene Ontology Consortium is to produce a dynamic, controlled vocabulary that can be applied to all eukaryotes even as knowledge of gene and protein roles in cells is accumulating and changing.
Journal ArticleDOI

Latent dirichlet allocation

TL;DR: This work proposes a generative model for text and other collections of discrete data that generalizes or improves on several previous models including naive Bayes/unigram, mixture of unigrams, and Hofmann's aspect model.
Journal ArticleDOI

Finding scientific topics

TL;DR: A generative model for documents is described, introduced by Blei, Ng, and Jordan, and a Markov chain Monte Carlo algorithm is presented for inference in this model, which is used to analyze abstracts from PNAS by using Bayesian model selection to establish the number of topics.
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