B
Bastien Boussau
Researcher at University of Lyon
Publications - 79
Citations - 7515
Bastien Boussau is an academic researcher from University of Lyon. The author has contributed to research in topics: Phylogenetic tree & Genome. The author has an hindex of 35, co-authored 71 publications receiving 6443 citations. Previous affiliations of Bastien Boussau include École normale supérieure de Lyon & Lyons.
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Journal ArticleDOI
Whole-genome analyses resolve early branches in the tree of life of modern birds
Erich D. Jarvis,Siavash Mirarab,Andre J. Aberer,Bo Li,Bo Li,Bo Li,Peter Houde,Cai Li,Cai Li,Simon Y. W. Ho,Brant C. Faircloth,Benoit Nabholz,Jason T. Howard,Alexander Suh,Claudia C. Weber,Rute R. da Fonseca,Jianwen Li,Fang Zhang Zhang,Hui Li,Long Zhou,Nitish Narula,Nitish Narula,Liang Liu,Ganesh Ganapathy,Bastien Boussau,Shamsuzzoha Bayzid,Volodymyr Zavidovych,Sankar Subramanian,Toni Gabaldón,Salvador Capella-Gutierrez,Jaime Huerta-Cepas,Bhanu Rekepalli,Bhanu Rekepalli,Kasper Munch,Mikkel H. Schierup,Bent E. K. Lindow,Wesley C. Warren,David A. Ray,Richard E. Green,Michael William Bruford,Xiangjiang Zhan,Xiangjiang Zhan,Andrew Dixon,Shengbin Li,Ning Li,Yinhua Huang,Elizabeth P. Derryberry,Elizabeth P. Derryberry,Mads F. Bertelsen,Frederick H. Sheldon,Robb T. Brumfield,Claudio V. Mello,Claudio V. Mello,Peter V. Lovell,Morgan Wirthlin,Maria Paula Cruz Schneider,Francisco Prosdocimi,José Alfredo Samaniego,Amhed Missael Vargas Velazquez,Alonzo Alfaro-Núñez,Paula F. Campos,Bent O. Petersen,Thomas Sicheritz-Pontén,An Pas,Thomas L. Bailey,R. Paul Scofield,Michael Bunce,David M. Lambert,Qi Zhou,Polina L. Perelman,Amy C. Driskell,Beth Shapiro,Zijun Xiong,Yongli Zeng,Shiping Liu,Zhenyu Li,Binghang Liu,Kui Wu,Jin Xiao,Xiong Yinqi,Quiemei Zheng,Yong Zhang,Huanming Yang,Jian Wang,Linnéa Smeds,Frank E. Rheindt,Michael J. Braun,Jon Fjeldså,Ludovic Orlando,F. Keith Barker,Knud A. Jønsson,Warren E. Johnson,Klaus-Peter Koepfli,Stephen J. O'Brien,David Haussler,Oliver A. Ryder,Carsten Rahbek,Eske Willerslev,Gary R. Graves,Gary R. Graves,Travis C. Glenn,John E. McCormack,Dave Burt,Hans Ellegren,Per Alström,Scott V. Edwards,Alexandros Stamatakis,David P. Mindell,Joel Cracraft,Edward L. Braun,Tandy Warnow,Tandy Warnow,Wang Jun,M. Thomas P. Gilbert,M. Thomas P. Gilbert,Guojie Zhang,Guojie Zhang +116 more
TL;DR: A genome-scale phylogenetic analysis of 48 species representing all orders of Neoaves recovered a highly resolved tree that confirms previously controversial sister or close relationships and identifies the first divergence in Neoaves, two groups the authors named Passerea and Columbea.
Journal ArticleDOI
Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota
Céline Brochier-Armanet,Bastien Boussau,Simonetta Gribaldo,Patrick Forterre,Patrick Forterre +4 more
TL;DR: It is shown that these mesophilic archaea are different from hyperthermophilic Crenarchaeota and branch deeper than was previously assumed, and should be considered as a third archaeal phylum, which the authors propose to name Thaum archaeota.
Journal ArticleDOI
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
Sebastian Höhna,Michael J. Landis,Tracy A. Heath,Tracy A. Heath,Bastien Boussau,Nicolas Lartillot,Brian R. Moore,John P. Huelsenbeck,Fredrik Ronquist +8 more
TL;DR: RevBayes is a new open-source software package based on probabilistic graphical models, a powerful generic framework for specifying and analyzing statistical models that outperforms competing software for several standard analyses and needs to explicitly specify each part of the model and analysis.
Journal ArticleDOI
Genome-scale coestimation of species and gene trees
Bastien Boussau,Bastien Boussau,Gergely J. Szöllősi,Laurent Duret,Manolo Gouy,Eric Tannier,Eric Tannier,Vincent Daubin +7 more
TL;DR: A new probabilistic model is presented to jointly infer rooted species and gene trees for dozens of genomes and thousands of gene families and yields a more accurate picture of ancestral genomes than the trees available in the authoritative database Ensembl.
Journal ArticleDOI
Statistical binning enables an accurate coalescent-based estimation of the avian tree
TL;DR: A statistical binning technique to address gene tree estimation error is developed and used to produce the first genome-scale coalescent-based avian tree of life, which is helpful in providing more accurate estimations of ILS levels in biological data sets.