L
Lars Stemmann
Researcher at University of Paris
Publications - 110
Citations - 10840
Lars Stemmann is an academic researcher from University of Paris. The author has contributed to research in topics: Zooplankton & Plankton. The author has an hindex of 40, co-authored 100 publications receiving 8050 citations. Previous affiliations of Lars Stemmann include Texas A&M University & Pierre-and-Marie-Curie University.
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Journal ArticleDOI
Structure and function of the global ocean microbiome
Shinichi Sunagawa,Luis Pedro Coelho,Samuel Chaffron,Jens Roat Kultima,Karine Labadie,Guillem Salazar,Bardya Djahanschiri,Georg Zeller,Daniel R. Mende,Adriana Alberti,Francisco M. Cornejo-Castillo,Paul I. Costea,Corinne Cruaud,Francesco d'Ovidio,Stefan Engelen,Isabel Ferrera,Josep M. Gasol,Lionel Guidi,Falk Hildebrand,Florian Kokoszka,Cyrille Lepoivre,Gipsi Lima-Mendez,Julie Poulain,Bonnie T. Poulos,Marta Royo-Llonch,Hugo Sarmento,Sara Vieira-Silva,Céline Dimier,Marc Picheral,Sarah Searson,Stefanie Kandels-Lewis,Tara Oceans Coordinators,Chris Bowler,Colomban de Vargas,Gabriel Gorsky,Nigel Grimsley,Pascal Hingamp,Daniele Iudicone,Olivier Jaillon,Fabrice Not,Hiroyuki Ogata,Stephane Pesant,Sabrina Speich,Lars Stemmann,Matthew B. Sullivan,Jean Weissenbach,Patrick Wincker,Eric Karsenti,Jeroen Raes,Silvia G. Acinas,Peer Bork +50 more
TL;DR: This work identifies ocean microbial core functionality and reveals that >73% of its abundance is shared with the human gut microbiome despite the physicochemical differences between these two ecosystems.
Journal ArticleDOI
Eukaryotic plankton diversity in the sunlit ocean
Colomban de Vargas,Colomban de Vargas,Stéphane Audic,Stéphane Audic,Nicolas Henry,Nicolas Henry,Johan Decelle,Johan Decelle,Frédéric Mahé,Frédéric Mahé,Frédéric Mahé,Ramiro Logares,Enrique Lara,Cédric Berney,Cédric Berney,Noan Le Bescot,Noan Le Bescot,Ian Probert,Ian Probert,Margaux Carmichael,Margaux Carmichael,Margaux Carmichael,Julie Poulain,Sarah Romac,Sarah Romac,Sébastien Colin,Sébastien Colin,Sébastien Colin,Jean-Marc Aury,Lucie Bittner,Samuel Chaffron,Samuel Chaffron,Micah Dunthorn,Stefan Engelen,Olga Flegontova,Olga Flegontova,Lionel Guidi,Lionel Guidi,Aleš Horák,Aleš Horák,Olivier Jaillon,Olivier Jaillon,Olivier Jaillon,Gipsi Lima-Mendez,Gipsi Lima-Mendez,Julius Lukeš,Julius Lukeš,Julius Lukeš,Shruti Malviya,Raphael Morard,Raphael Morard,Raphael Morard,Matthieu Mulot,Eleonora Scalco,Raffaele Siano,Flora Vincent,Flora Vincent,Adriana Zingone,Céline Dimier,Céline Dimier,Céline Dimier,Marc Picheral,Marc Picheral,Sarah Searson,Sarah Searson,Stefanie Kandels-Lewis,Tara Oceans Coordinators,Silvia G. Acinas,Peer Bork,Peer Bork,Chris Bowler,Gabriel Gorsky,Gabriel Gorsky,Nigel Grimsley,Nigel Grimsley,Pascal Hingamp,Daniele Iudicone,Fabrice Not,Fabrice Not,Hiroyuki Ogata,Stephane Pesant,Jeroen Raes,Jeroen Raes,Michael E. Sieracki,Michael E. Sieracki,Sabrina Speich,Sabrina Speich,Lars Stemmann,Lars Stemmann,Shinichi Sunagawa,Jean Weissenbach,Jean Weissenbach,Jean Weissenbach,Patrick Wincker,Patrick Wincker,Patrick Wincker,Eric Karsenti,Eric Karsenti +97 more
TL;DR: Diversity emerged at all taxonomic levels, both within the groups comprising the ~11,200 cataloged morphospecies of eukaryotic plankton and among twice as many other deep-branching lineages of unappreciated importance in plankton ecology studies.
Journal ArticleDOI
Determinants of community structure in the global plankton interactome
Gipsi Lima-Mendez,Karoline Faust,Nicolas Henry,Johan Decelle,Sébastien Colin,Fabrizio Carcillo,Samuel Chaffron,J. Cesar Ignacio-Espinosa,Simon Roux,Flora Vincent,Flora Vincent,Lucie Bittner,Youssef Darzi,Jun Wang,Stéphane Audic,Léo Berline,Gianluca Bontempi,Ana María Cabello,Laurent Coppola,Francisco M. Cornejo-Castillo,Francesco d'Ovidio,Luc De Meester,Isabel Ferrera,Marie-José Garet-Delmas,Lionel Guidi,Elena Lara,Stephane Pesant,Marta Royo-Llonch,Guillem Salazar,Pablo Sánchez,Marta Sebastián,Caroline Souffreau,Céline Dimier,Marc Picheral,Sarah Searson,Stefanie Kandels-Lewis,Tara Oceans Coordinators,Tara Oceans Coordinators,Gabriel Gorsky,Fabrice Not,Hiroyuki Ogata,Sabrina Speich,Lars Stemmann,Jean Weissenbach,Patrick Wincker,Silvia G. Acinas,Shinichi Sunagawa,Peer Bork,Matthew B. Sullivan,Eric Karsenti,Chris Bowler,Colomban de Vargas,Jeroen Raes +52 more
TL;DR: It is found that environmental factors are incomplete predictors of community structure and associations across plankton functional types and phylogenetic groups to be nonrandomly distributed on the network and driven by both local and global patterns.
Journal ArticleDOI
Plankton networks driving carbon export in the oligotrophic ocean.
Lionel Guidi,Samuel Chaffron,Lucie Bittner,Damien Eveillard,Abdelhalim Larhlimi,Simon Roux,Youssef Darzi,Stéphane Audic,Léo Berline,Jennifer R. Brum,Luis Pedro Coelho,Julio Cesar Ignacio Espinoza,Shruti Malviya,Shinichi Sunagawa,Céline Dimier,Stefanie Kandels-Lewis,Marc Picheral,Julie Poulain,Sarah Searson,Lars Stemmann,Fabrice Not,Pascal Hingamp,Sabrina Speich,Mick Follows,Lee Karp-Boss,Emmanuel Boss,Hiroyuki Ogata,Stephane Pesant,Jean Weissenbach,Patrick Wincker,Silvia G. Acinas,Peer Bork,Daniele Iudicone,Matthew B. Sullivan,Jeroen Raes,Eric Karsenti,Chris Bowler,Gabriel Gorsky +37 more
TL;DR: It is shown that specific plankton communities, from the surface and deep chlorophyll maximum, correlate with carbon export at 150 m and that the relative abundance of a few bacterial and viral genes can predict a significant fraction of the variability in carbon export in these regions.
Journal ArticleDOI
Marine DNA Viral Macro- and Microdiversity from Pole to Pole.
Ann C. Gregory,Ahmed A. Zayed,Nádia Conceição-Neto,Ben Temperton,Ben Bolduc,Adriana Alberti,Mathieu Ardyna,Ksenia Arkhipova,Margaux Carmichael,Corinne Cruaud,Céline Dimier,Céline Dimier,Guillermo Dominguez-Huerta,Joannie Ferland,Stefanie Kandels,Yunxiao Liu,Claudie Marec,Stephane Pesant,Marc Picheral,Sergey Pisarev,Julie Poulain,Jean-Éric Tremblay,Dean R. Vik,Silvia G. Acinas,Marcel Babin,Peer Bork,Emmanuel Boss,Chris Bowler,Guy Cochrane,Colomban de Vargas,Michael J. Follows,Gabriel Gorsky,Nigel Grimsley,Lionel Guidi,Pascal Hingamp,Daniele Iudicone,Olivier Jaillon,Stefanie Kandels-Lewis,Lee Karp-Boss,Eric Karsenti,Fabrice Not,Hiroyuki Ogata,Nicole J. Poulton,Jeroen Raes,Christian Sardet,Sabrina Speich,Lars Stemmann,Matthew B. Sullivan,Shinichi Sunagawa,Patrick Wincker,Alexander I. Culley,Bas E. Dutilh,Bas E. Dutilh,Simon Roux +53 more
TL;DR: An ∼12-fold expanded global ocean DNA virome dataset is established of 195,728 viral populations, now including the Arctic Ocean, and it is validated that these populations form discrete genotypic clusters.