R
Ranjan Deka
Researcher at University of Cincinnati
Publications - 197
Citations - 10628
Ranjan Deka is an academic researcher from University of Cincinnati. The author has contributed to research in topics: Population & Allele. The author has an hindex of 52, co-authored 178 publications receiving 9856 citations. Previous affiliations of Ranjan Deka include University of Texas Health Science Center at Houston & Boston Children's Hospital.
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Journal ArticleDOI
Conservation of human chromosome 13 polymorphic microsatellite (CA)n repeats in chimpanzees.
Ranjan Deka,Mark D. Shriver,Ling M. Yu,Li Jin,Christopher E. Aston,Ranajit Chakraborty,Robert E. Ferrell +6 more
TL;DR: The genetic distance between humans and chimpanzees was found to be ninefold smaller than expected assuming there is no selection or mutational bias toward retention of (CA)n repeat arrays, which suggests a functional significance for these microsatellite loci.
Journal ArticleDOI
Dynamics of Repeat Polymorphisms Under a Forward-Backward Mutation Model: Within- and Between-Population Variability at Microsatellite Loci
TL;DR: This work provides a mathematical basis for suggesting a measure of genetic distance between populations based on microsatellite variation and indicates that such a genetic distance measure can remain proportional to the divergence time of populations even when the forward-backward mutations produce variable and/or directionally biased alleles size changes.
Journal ArticleDOI
Prevalence of adiposity and associated cardiometabolic risk factors in the Samoan genome-wide association study.
Nicola L. Hawley,Nicola L. Hawley,Ryan L. Minster,Daniel E. Weeks,Satupaitea Viali,Muagututia Sefuiva Reupena,Guangyun Sun,Hong Cheng,Ranjan Deka,Stephen T. McGarvey +9 more
TL;DR: The prevalence of obesity‐related noncommunicable diseases (NCDs) and associated risk factors in a sample of Samoan adults studied in 2010 as part of a genome‐wide assocation study (GWAS) for obesity related traits is described.
Journal ArticleDOI
Whole-genome amplification: relative efficiencies of the current methods.
Guangyun Sun,Ritesh Kaushal,Prodipto Pal,Michael Wolujewicz,Diane T. Smelser,Hong Cheng,Mei Lu,Ranajit Chakraborty,Li Jin,Ranjan Deka +9 more
TL;DR: It is demonstrated that blood spots on FTA cards are a more efficient source of DNA for I-PEP as compared to MDA, especially for STR analysis, and the specificity of the I- PEP products appears to be higher, particularly in the analysis of STR loci.
Journal ArticleDOI
Assessing the contribution of rare variants to complex trait heritability from whole-genome sequence data
Pierrick Wainschtein,Deepti Jain,Zhili Zheng,Stella Aslibekyan,Diane M. Becker,Wenjian Bi,Jennifer A. Brody,Jenna C. Carlson,Adolfo Correa,Margaret Mengmeng Du,Lindsay Fernández-Rhodes,Kendra Ferrier,Misa Graff,Jiang He,Nancy L. Heard-Costa,Heather M. Highland,Joel N. Hirschhorn,Candace M Howard-Claudio,Carmen R. Isasi,Rebecca D. Jackson,Jicai Jiang,Roby Joehanes,Anne E. Justice,Rita R. Kalyani,Sharon L.R. Kardia,Ethan M. Lange,Meryl S. LeBoff,Seunggeun Lee,Xihao Li,Zilin Li,Elise Lim,Danyu Lin,Xihong Lin,Simin Liu,Ying Chang Lu,Joanna Manson,Lisa A. Martin,Caitlin P. McHugh,Julie L. Mikulla,Solomon K. Musani,Maggie C.Y. Ng,Deborah A. Nickerson,Nicholette D. Palmer,James C. Perry,Ulrike Peters,Michael Preuss,Qibin Qi,Laura M. Raffield,Laura J. Rasmussen-Torvik,Alexander P. Reiner,Emily M. Russell,Colleen M. Sitlani,Jennifer A. Smith,Cassandra N. Spracklen,Tao Wang,Zhe Wang,Jennifer Wessel,Hanfei Xu,Mohammadi Yaser,Sachiko Yoneyama,Kendra A. Young,Jingwen Zhang,Xinruo Zhang,Hufeng Zhou,Xiaofeng Zhu,Sebastian Zoellner,Namiko Abe,Gonçalo R. Abecasis,François Aguet,Laura Almasy,Álvaro Alonso,Seth A. Ament,Peter Anderson,Pramod Anugu,Deborah Applebaum-Bowden,Kristin G. Ardlie,Dan E. Arking,Allison E. Ashley-Koch,Tim Assimes,Paul L. Auer,Dimitrios Avramopoulos,Najib T. Ayas,Adithya Balasubramanian,John Barnard,Kathleen C. Barnes,Ronald G. Barr,Emily Barron-Casella,Lucas Barwick,Terri H. Beaty,Gerald Beck,Lewis C. Becker,Rebecca L. Beer,Amber L. Beitelshees,Emelia J. Benjamin,Takis Benos,Marcos Bezerra,Lawrence F. Bielak,Joshua A Bis,Thomas W. Blackwell,John Blangero,Donald W. Bowden,Russell P. Bowler,Ulrich Broeckel,Jai G. Broome,Deborah L. Brown,Karen L. Bunting,Esteban G. Burchard,Carlos Bustamante,Erin J Buth,Brian E. Cade,Jonathan Cardwell,Vincent J. Carey,Julie Carrier,April P Carson,Cara L. Carty,Richard Casaburi,Juan Pablo Casas Romero,James M. Casella,Peter J. Castaldi,Mark Chaffin,Christy Y. P. Chang,Yi-Cheng Chang,Sameer Chavan,Bo Chen,Wei-Min Chen,Mi Ae Cho,Seung Hoan Choi,Lee-Ming Chuang,Ren-Hua Chung,C. Clish,Suzy C. Comhair,Matthew P. Conomos,Elaine Cornell,Carolyn J. Crandall,J. A. Crapo,Joanne E. Curran,Jeffrey R. Curtis,Brian Custer,Coleen M. Damcott,Dawood Darbar,Sean David,Colleen P. Davis,Michelle Daya,L. de las Fuentes,Paul S. de Vries,Michael DeBaun,Ranjan Deka,Dawn L. DeMeo,Scott Devine,Huyen Dinh,Harshavardhan Doddapaneni,Qing Duan,Shannon Dugan-Perez,Ravindranath Duggirala,J. Peter Durda,Susan K. Dutcher,Charles B. Eaton,Lynette Ekunwe,A. El Boueiz,Leslie S. Emery,Serpil C. Erzurum,Charles D. Farber,Jesse Farek,Tasha E. Fingerlin,Matthew Flickinger,Nora Franceschini,Christian D. Frazar,Mao Fu,Stephanie M. Fullerton,Lucinda Fulton,Stacey Gabriel,Weiniu Gan,Shanshan Gao,Yan Gao,Margery Gass,Heather Geiger,Bruce Gelb,M. Geraci,Soren Germer,Robert E. Gerszten,Auyon J. Ghosh,Richard Gibbs,Christopher R. Gignoux,M. Ruban Gladwin,David E. Glahn,Stephanie M. Gogarten,Da-Wei Gong,Harald H.H. Gőring,Sharon L. Graw,Kathryn J. Gray,Daniel Grine,Colin Gross,C. Charles Gu,Yue Guan,Namrata Gupta,David M. Haas,Jeffrey Haessler,Michael N. Hall,Yi Han,Patrick J. Hanly,Daniel N. Harris,Nicola L. Hawley,Benjamin D. Heavner,David Herrington,Craig P. Hersh,Bertha Hidalgo,James E. Hixson,Brian D. Hobbs,John Hokanson,Elliot Hong,Karin F. Hoth,Chao A. Hsiung,Jianhong Hu,Yi Jen Hung,Haley Huston,Chii-Min Hwu,Marguerite R. Irvin,Cashell E. Jaquish,Jill M. Johnsen,Andrew Johnson,Craig Johnson,Richard Karl. Johnston,Kimberly Jones,Hyun Min Kang,Robert Kaplan,Shannon Jeanne Kelly,Eimear E. Kenny,Michael Kessler,Alyna T. Khan,Ziad Khan,Wonji Kim,John Kimoff,Greg Kinney,Barbara A. Konkle,Holly B. Kramer,Christoph Lange,Jiwon Lee,Sandra L. Lee,Wen-Jane Lee,Jonathon LeFaive,David K. Levine,Daniel Levy,Joshua P. Lewis,Xiaohui Li,Yun Li,Henry J. Lin,Honghuang Lin,Yongmei Liu,Yu Liu,Kathryn L. Lunetta,James Luo,Ulysses J. Magalang,Michael P. Mahaney,Barry J. Make,Ani Manichaikul,Alisa K. Manning,Melissa A. Marton,Susan Mathai,Susanne May,Patrick F. McArdle,Sean K. McFarland,Daniel J. McGoldrick,Becky McNeil,Hao Mei,J.R. Meigs,Vipin Menon,Luisa Mestroni,Ginger A. Metcalf,Deborah A. Meyers,Emmanuel Mignot,Nancy Min,Mollie A. Minear,Ryan L. Minster,Matthew Moll,Zeineen Momin,May E. Montasser,Courtney G. Montgomery,Donna M. Muzny,Josyf C. Mychaleckyj,Girish N. Nadkarni,Rakhi Naik,Take Naseri,Pradeep Natarajan,Sergei Nekhai,Sarah C. Nelson,Bonnie Neltner,Caitlin E. Nessner,Osuji Nkechinyere,T. O’Connor,Heather M. Ochs-Balcom,Geoffrey Okwuonu,Allan Pack,David T. Paik,James S. Pankow,George J. Papanicolaou,Cora Parker,Gina M. Peloso,Juan M. Peralta,Marco V Perez,Patricia A. Peyser,L. Phillips,Jacob Pleiness,Toni I. Pollin,Wendy S. Post,Julia Powers Becker,Meher Preethi Boorgula,Pankaj Qasba,Dandi Qiao,Zhaohui S. Qin,Nicholas Rafaels,Mahitha Rajendran,D. C. Rao,Aakrosh Ratan,Robert M. Reed,Catherine Reeves,Muagututi‘a Sefuiva Reupena,Kenneth Rice,Rébecca Robillard,Nicolas Robine,Carolina Roselli,Ingo Ruczinski,Alexi M Runnels,Pamela Russell,Sarah E. Ruuska,Kathleen A. Ryan,Ester Cerdeira Sabino,Danish Saleheen,Shabnam Salimi,Sejal Salvi,Steven L. Salzberg,Kevin Sandow,Vijay G. Sankaran,Jireh Santibanez,Karen Schwander,David A. Schwartz,Frank C. Sciurba,Christine E. Seidman,Jonathan Seidman,Vivien A. Sheehan,Stephanie Sherman,Amol C. Shetty,Aniket Shetty,Wayne H-H Sheu,Brian H. Silver,Edwin K. Silverman,Robert Skomro,Josh Smith,Tanja Smith,Sylvia Smoller,Beverly M. Snively,Michael Snyder,Tamar Sofer,Nona Sotoodehnia,Adrienne M. Stilp,Garrett R. Storm,Elizabeth A. Streeten,Jessica Lasky-Su,Yun Ju Sung,Jody S. Sylvia,Adam A. Szpiro,Daniel Taliun,Hua Tang,Margaret A. Taub,Kent D. Taylor,Matthew D. Taylor,Simeon I. Taylor,Marilyn I. Telen,Timothy A. Thornton,M. Threlkeld,Lesley F. Tinker,David L. Tirschwell,Sarah A. Tishkoff,Hemant K. Tiwari,Catherine Tong,Russell P. Tracy,Michael Y. Tsai,Dhananjay Vaidya,David Van Den Berg,Peter VandeHaar,Scott I. Vrieze,Tarik Walker,Robert B. Wallace,Avram D. Walts,Fei Fei Wang,Heming Wang,Jiongming Wang,Karol E. Watson,Jennifer Watt,Daniel E. Weeks,Joshua S. Weinstock,Scott T. Weiss,Lu-Chen Weng,Cristen J. Willer,Kayleen Williams,L. Keoki Williams,Carla F. Wilson,James F. Wilson,Lara Heermans Winterkorn,Quenna Wong,Joseph M. Wu,Huichun Xu,Ivana V. Yang,Ketian Yu,Seyedeh M. Zekavat,Yingze Zhang,Snow Xueyan Zhao,Wei Zhao,Michael C. Zody,L. Adrienne Cupples,Aladdin H. Shadyab,Barbara McKnight,Benjamin Shoemaker,Braxton D. Mitchell,Bruce M. Psaty,Charles Kooperberg,Ching-Ti Liu,Christine M. Albert,Dan M. Roden,Daniel I. Chasman,Donald M. Lloyd-Jones,Donna K. Arnett,Elizabeth A. Regan,Eric Boerwinkle,Jerome I. Rotter,Jeffrey R. O'Connell,Lisa R. Yanek,Mariza de Andrade,Matthew A. Allison,M. McDonald,Mina K. Chung,Myriam Fornage,Nathalie Chami,Nicholas L. Smith,Patrick T. Ellinor,Ramachandran S. Vasan,Rasika A. Mathias,Ruth J. F. Loos,Stephen S. Rich,Steven A. Lubitz,Susan R. Heckbert,Susan Redline,Xiuqing Guo,Y. D. Chen,Cecelia A. Laurie,Ryan D. Hernandez,Stephen T. McGarvey,Michael E. Goddard,Cathy C. Laurie,Kari E. North,Leslie A. Lange,Bruce S. Weir,Loic Yengo,Jian Yang,Peter M. Visscher +453 more
TL;DR: The results imply that rare variants, in particular those in regions of low linkage disequilibrium, are a major source of the still missing heritability of complex traits and disease.