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Open AccessJournal ArticleDOI

Chemical Modification of siRNA Bases to Probe and Enhance RNA Interference

TLDR
Less common chemical modifications of the RNA nucleobases have the potential to lend insight into the mechanism of gene silencing and to lead to novel methods to overcome off-target effects that arise due to deleterious protein binding or mis-targeting of mRNA.
Abstract
Considerable attention has focused on the use of alternatives to the native ribose and phosphate backbone of small interfering RNAs for therapeutic applications of the RNA interference pathway. In this synopsis, we highlight the less common chemical modifications, namely, those of the RNA nucleobases. Base modifications have the potential to lend insight into the mechanism of gene silencing and to lead to novel methods to overcome off-target effects that arise due to deleterious protein binding or mis-targeting of mRNA.

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Journal ArticleDOI

Designing Chemically Modified Oligonucleotides for Targeted Gene Silencing

TL;DR: This review provides a current and detailed account of ON chemical modification strategies for the optimization of biological activity and therapeutic application, while clarifying the biological pathways, chemical properties, benefits, and limitations of oligonucleotide analogs used in nucleic acids research.
Journal ArticleDOI

Therapeutic siRNA: state of the art.

TL;DR: In this review, the evolution of siRNA chemical modifications and their biomedical performance are comprehensively reviewed and all clinically explored and commercialized siRNA delivery platforms, including the GalNAc–siRNA conjugate, and their fundamental design principles are thoroughly discussed.
Journal ArticleDOI

CRISPR/Cas9-Based Genome Editing for Disease Modeling and Therapy: Challenges and Opportunities for Nonviral Delivery

TL;DR: The rapidly developing CRISPR/Cas9-based technologies for disease modeling and gene correction and recent progress toward Cas9/guide RNA (gRNA) delivery based on viral and nonviral vectors are reviewed.
Journal ArticleDOI

MicroRNA mimicry blocks pulmonary fibrosis

TL;DR: The data support the feasibility of using miRNA mimics to therapeutically increase miRNAs and indicate miR‐29 to be a potent therapeutic miRNA for treating pulmonary fibrosis.
Journal ArticleDOI

miRNA therapeutics: a new class of drugs with potential therapeutic applications in the heart

TL;DR: The authors describe the contribution of miRNAs to cardiac biology and disease and discuss various strategies for manipulating miRNA activity including antisense oligonucleotides, mimics, miRNA sponges, Tough Decoys and miRNA mowers.
References
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Journal ArticleDOI

Asymmetry in the assembly of the RNAi enzyme complex.

TL;DR: It is shown that the two strands of an siRNA duplex are not equally eligible for assembly into RISC, and it is suggested that single-stranded miRNAs are initially generated as siRNA-like duplexes whose structures predestine one strand to enter the RISC and the other strand to be destroyed.
Journal ArticleDOI

Functional siRNAs and miRNAs Exhibit Strand Bias

TL;DR: The results suggest that the thermodynamic properties of siRNA play a critical role in determining the molecule's function and longevity, possibly biasing the steps involved in duplex unwinding and strand retention by RISC.
Journal Article

RNA interference : RNA

Gregory J. Hannon
- 01 Jan 2002 - 
TL;DR: A conserved biological response to double-stranded RNA, known variously as RNA interference (RNAi) or post-transcriptional gene silencing, mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
Journal ArticleDOI

Human Argonaute2 Mediates RNA Cleavage Targeted by miRNAs and siRNAs

TL;DR: In this paper, it was shown that miRNAs are incorporated indiscriminately of their sequence into Ago1 through Ago4 containing microRNPs (miRNPs) and endonuclease activity is exclusively associated with Ago2.
Journal Article

Human argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs

TL;DR: The authors' results suggest that miRNAs are incorporated indiscriminately of their sequence into Ago1 through Ago4 containing microRNPs (miRNPs), and the specific role of Ago2 in guiding target RNA cleavage was confirmed by siRNA-based depletion of individual Ago members in combination with a sensitive positive-readout reporter assay.
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