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Open AccessJournal ArticleDOI

Potent neutralizing antibodies from COVID-19 patients define multiple targets of vulnerability.

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TLDR
It is shown that the patients had strong immune responses against the viral spike protein, a complex that binds to receptors on the host cell, and monoclonal antibodies isolated here are promising candidates for COVID-19 treatment and prevention.
Abstract
The rapid spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has had a large impact on global health, travel, and economy. Therefore, preventative and therapeutic measures are urgently needed. Here, we isolated monoclonal antibodies from three convalescent coronavirus disease 2019 (COVID-19) patients using a SARS-CoV-2 stabilized prefusion spike protein. These antibodies had low levels of somatic hypermutation and showed a strong enrichment in VH1-69, VH3-30-3, and VH1-24 gene usage. A subset of the antibodies was able to potently inhibit authentic SARS-CoV-2 infection at a concentration as low as 0.007 micrograms per milliliter. Competition and electron microscopy studies illustrate that the SARS-CoV-2 spike protein contains multiple distinct antigenic sites, including several receptor-binding domain (RBD) epitopes as well as non-RBD epitopes. In addition to providing guidance for vaccine design, the antibodies described here are promising candidates for COVID-19 treatment and prevention.

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Posted ContentDOI

Semantic and population analysis of the genetic targets related to COVID-19 and its association with genes and diseases

TL;DR: A semantic analysis of SARS-CoV-2 related publications yielded a repertoire of SNPs, genes and disease ontologies, which have the potential to elucidate the complex interaction between COVID-19 pathogenesis and host genetic variation.
Peer Review

COVID-19 Infection: An Overview of Pathophysiology, Management, and Complications

TL;DR: This article is a general review, and the management guidelines are different in different parts of the World, Hence, the reader should consult local health guidelines to manage their patients.
Journal ArticleDOI

Comparative Analysis and Classification of SARS-CoV-2 Spike Protein Structures in PDB

TL;DR: In this article , the comparative analysis of SARS-CoV-2 S protein structures is performed through comparative analysis, and the protein structures in the PDB (protein data bank) database are compared and analyzed not only with each other but with the structures of other viruses for various parameters.
Journal ArticleDOI

Neutralizing Efficacy of Encapsulin Nanoparticles against SARS-CoV2 Variants of Concern

TL;DR: In this paper , a nanoparticle display combined with the SpyTag-SpyCatcher system was used to design encapsulin-mRBD, a vaccine displaying 180 copies of the monomeric SARS-CoV-2 spike receptor-binding domain (RBD).
References
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Journal ArticleDOI

UCSF Chimera--a visualization system for exploratory research and analysis.

TL;DR: Two unusual extensions are presented: Multiscale, which adds the ability to visualize large‐scale molecular assemblies such as viral coats, and Collaboratory, which allows researchers to share a Chimera session interactively despite being at separate locales.
Journal ArticleDOI

Epidemiological and clinical characteristics of 99 cases of 2019 novel coronavirus pneumonia in Wuhan, China: a descriptive study

TL;DR: Characteristics of patients who died were in line with the MuLBSTA score, an early warning model for predicting mortality in viral pneumonia, and further investigation is needed to explore the applicability of the Mu LBSTA scores in predicting the risk of mortality in 2019-nCoV infection.
Journal ArticleDOI

An interactive web-based dashboard to track COVID-19 in real time.

TL;DR: The outbreak of the 2019 novel coronavirus disease (COVID-19) has induced a considerable degree of fear, emotional stress and anxiety among individuals around the world.
Journal ArticleDOI

Enzymatic assembly of DNA molecules up to several hundred kilobases

TL;DR: An isothermal, single-reaction method for assembling multiple overlapping DNA molecules by the concerted action of a 5′ exonuclease, a DNA polymerase and a DNA ligase is described.
Journal ArticleDOI

Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation.

TL;DR: The authors show that this protein binds at least 10 times more tightly than the corresponding spike protein of severe acute respiratory syndrome (SARS)–CoV to their common host cell receptor, and test several published SARS-CoV RBD-specific monoclonal antibodies found that they do not have appreciable binding to 2019-nCoV S, suggesting that antibody cross-reactivity may be limited between the two RBDs.
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How successful are antibody infusions for Covid?

In addition to providing guidance for vaccine design, the antibodies described here are promising candidates for COVID-19 treatment and prevention.