Open AccessJournal Article
Towards a phylogenetic clarification of Lophiostoma / Massarina and morphologically similar genera in the Pleosporales
Ying Zhang,Hong-Kai Wang,Jacques Fournier,Pedro W. Crous,Rajesh Jeewon,Stephen B. Pointing,Kevin D. Hyde +6 more
TLDR
It is confirmed that both Lophiostoma and Massarina are polyphyletic.Abstract:
Lophiostoma, Lophiotrema and Massarina are similar genera that are difficult to distinguish morphologically. In order to obtain a better understanding of these genera, lectotype material of the generic types, Lophiostoma macrostomun, Lophiotrema nucula and Massarina eburnea were examined and are re-described. The phylogeny of these genera is investigated based oil the analysis of 26 Lophiostoma- and Massarina-like taxa and three genes - 18S, 28S rDNA and RPB2. These taxa formed five well-supported sub-clades in Pleosporales. This Study confirms that both Lophiostoma and Massarina are polyphyletic. Massarina-like taxa can presently be differentiated into two groups - the Lentithecium group and the Massarina group. Of these, the type species M. eburnea together with the Massarina group represents Massarina sensu stricto. Lophiostoma taxa Clustered in two groups - one group, including the type species L. macrostomum, is characterized by fusiform, hyaline one-septate ascospores which are pigmented and 3-septate when senescent, clavate asci, and apical structures which are highly variable, being crest-like in L. macrostomum, all umbilicate pore surrounded by 4-6 radial ridges in L. rugulosum, or papillate in L. glabrotunicatum. The second group comprises Lophiostoma species with heavily pigmented multi-septate ascospores and compressed crests. Lophiotrema species including the type species L. nucula form a monophyletic group. One new genus - Lentithecium with five new species - Lentithecium aquaticum, Lophiostoma glabrotunicatum, L. rugulosum, Lophiotrema brunneosporum and L. lignicola and three new combinations - Lentithecium arundinaceum, L. fluviatile and L. lineare are introduced in this paper.read more
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Families of Dothideomycetes
Kevin D. Hyde,E. B. Gareth Jones,Jian-Kui Liu,Hiran A. Ariyawansa,Eric W.A. Boehm,Saranyaphat Boonmee,Uwe Braun,Putarak Chomnunti,Pedro W. Crous,Dong-Qin Dai,Paul Diederich,Asha J. Dissanayake,Mingkhuan Doilom,Francesco Doveri,S. Hongsanan,Ruvishika S. Jayawardena,James D. Lawrey,Yan-Mei Li,Yong Xiang Liu,Robert Lücking,Jutamart Monkai,Lucia Muggia,Lucia Muggia,Matthew P. Nelsen,Ka-Lai Pang,Rungtiwa Phookamsak,Indunil C. Senanayake,Carol A. Shearer,Satinee Suetrong,Kazuaki Tanaka,Kasun M. Thambugala,Nalin N. Wijayawardene,Saowanee Wikee,Hai Xia Wu,Ying Zhang,Begoña Aguirre-Hudson,S. Aisyah Alias,André Aptroot,Ali H. Bahkali,José Jailson Lima Bezerra,D. Jayarama Bhat,D. Jayarama Bhat,Erio Camporesi,Ekachai Chukeatirote,Cécile Gueidan,David L. Hawksworth,David L. Hawksworth,David L. Hawksworth,Kazuyuki Hirayama,Sybren de Hoog,Ji Chuan Kang,Kerry Knudsen,Wen-Jing Li,Xinghong Li,Zou Yi Liu,Ausana Mapook,Eric H. C. McKenzie,Andrew N. Miller,Peter E. Mortimer,Peter E. Mortimer,Alan J. L. Phillips,Huzefa A. Raja,Christian Scheuer,Felix Schumm,Joanne E. Taylor,Qing Tian,Saowaluck Tibpromma,Dhanushka N. Wanasinghe,Yong Wang,Jianchu Xu,Supalak Yacharoen,Ji Ye Yan,Min Zhang +72 more
TL;DR: Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers (bitunicate asci) and often with fissitunicate dehiscence, and it is hoped that by illustrating types they provide stimulation and interest so that more work is carried out in this remarkable group of fungi.
Journal ArticleDOI
Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa
Guo Jie Li,Kevin D. Hyde,Kevin D. Hyde,Kevin D. Hyde,Rui-Lin Zhao,Sinang Hongsanan,Sinang Hongsanan,Faten A. Abdel-Aziz,Mohamed A. Abdel-Wahab,Mohamed A. Abdel-Wahab,Pablo Alvarado,Genivaldo Alves-Silva,Joseph F. Ammirati,Hiran A. Ariyawansa,Abhishek Baghela,Ali H. Bahkali,Michael Beug,D. Jayarama Bhat,Dimitar Bojantchev,Thitiya Boonpratuang,Timur S. Bulgakov,Erio Camporesi,Marcela C. Boro,Oldriska Ceska,Dyutiparna Chakraborty,Jia-Jia Chen,K. W. Thilini Chethana,Putarak Chomnunti,Giovanni Consiglio,Bao-Kai Cui,Dong-Qin Dai,Yu Cheng Dai,Dinushani A. Daranagama,Dinushani A. Daranagama,Kanad Das,Monika C. Dayarathne,Monika C. Dayarathne,Eske De Crop,Rafael J. V. De Oliveira,Carlos Alberto Fragoso de Souza,José I. de Souza,Bryn T. M. Dentinger,Bryn T. M. Dentinger,Asha J. Dissanayake,Mingkwan Doilom,Mingkwan Doilom,E. Ricardo Drechsler-Santos,Masoomeh Ghobad-Nejhad,Sean P. Gilmore,Aristóteles Góes-Neto,Michał Gorczak,Charles H. Haitjema,Kalani Kanchana Hapuarachchi,Kalani Kanchana Hapuarachchi,Akira Hashimoto,Akira Hashimoto,Mao Qiang He,Mao Qiang He,John K. Henske,Kazuyuki Hirayama,María Josefina Iribarren,Subashini C. Jayasiri,Ruvishika S. Jayawardena,Sun Jeong Jeon,Gustavo Henrique Jerônimo,Ana L. Jesus,E. B. Gareth Jones,Ji Chuan Kang,Samantha C. Karunarathna,Samantha C. Karunarathna,Paul M. Kirk,Sirinapa Konta,Sirinapa Konta,Eric Kuhnert,Ewald Langer,Haeng Sub Lee,Hyang Burm Lee,Wen-Jing Li,Wen-Jing Li,Xinghong Li,Kare Liimatainen,Diogo Xavier Lima,Chuan Gen Lin,Chuan Gen Lin,Jian-Kui Liu,Xings Zhong Liu,Zuo Yi Liu,J. Jennifer Luangsa-ard,Robert Lücking,H. Thorsten Lumbsch,Saisamorn Lumyong,Eduardo M. Leaño,Agostina V. Marano,Misato Matsumura,Misato Matsumura,Eric H. C. McKenzie,Suchada Mongkolsamrit,Peter E. Mortimer,Thi Thuong Thuong Nguyen,Tuula Niskanen,Chada Norphanphoun,Chada Norphanphoun,Michelle A. O’Malley,Sittiporn Parnmen,Julia Pawłowska,Rekhani H. Perera,Rekhani H. Perera,Rungtiwa Phookamsak,Rungtiwa Phookamsak,Chayanard Phukhamsakda,Chayanard Phukhamsakda,Carmen L. A. Pires-Zottarelli,Olivier Raspé,Mateus Arduvino Reck,Sarah C. O. Rocha,André L. C. M. A. de Santiago,Indunil C. Senanayake,Ledo Setti,Qiu Ju Shang,Sanjay K. Singh,Esteban Benjamin Sir,Kevin V. Solomon,Jie Song,Prasert Srikitikulchai,Marc Stadler,Satinee Suetrong,Hayato Takahashi,Takumasa Takahashi,Kazuaki Tanaka,Li Ping Tang,Kasun M. Thambugala,Donnaya Thanakitpipattana,Michael K. Theodorou,Benjarong Thongbai,Tuksaporn Thummarukcharoen,Qing Tian,Qing Tian,Saowaluck Tibpromma,Saowaluck Tibpromma,Annemieke Verbeken,Alfredo Vizzini,Josef Vlasák,Kerstin Voigt,Dhanushka N. Wanasinghe,Dhanushka N. Wanasinghe,Yong Wang,Gothamie Weerakoon,Hua An Wen,Ting-Chi Wen,Nalin N. Wijayawardene,Sarunyou Wongkanoun,Marta Wrzosek,Yuan Pin Xiao,Yuan Pin Xiao,Jianchu Xu,Ji Ye Yan,Jing Yang,Shu Da Yang,Yu Hu,Jin-Feng Zhang,Jie Zhao,Li-Wei Zhou,Derek Peršoh,Alan J. L. Phillips,Sajeewa S. N. Maharachchikumbura +164 more
TL;DR: This paper is a compilation of notes on 142 fungal taxa, including five new families, 20 new genera, and 100 new species, representing a wide taxonomic and geographic range.
Journal ArticleDOI
Fungal diversity notes 1–110: taxonomic and phylogenetic contributions to fungal species
Jian-Kui Liu,Kevin D. Hyde,Kevin D. Hyde,E. B. Gareth Jones,Hiran A. Ariyawansa,Hiran A. Ariyawansa,Darbhe J. Bhat,Saranyaphat Boonmee,Sajeewa S. N. Maharachchikumbura,Sajeewa S. N. Maharachchikumbura,Eric H. C. McKenzie,Rungtiwa Phookamsak,Rungtiwa Phookamsak,Chayanard Phukhamsakda,Chayanard Phukhamsakda,Belle Damodara Shenoy,Mohamed A. Abdel-Wahab,Mohamed A. Abdel-Wahab,Bart Buyck,Jie Chen,K. W. Thilini Chethana,Chonticha Singtripop,Chonticha Singtripop,Dong-Qin Dai,Dong-Qin Dai,Yu Cheng Dai,Dinushani A. Daranagama,Dinushani A. Daranagama,Asha J. Dissanayake,Mingkwan Doilom,Mingkwan Doilom,Melvina J. D’souza,Melvina J. D’souza,Xinlei Fan,Ishani D. Goonasekara,Kazuyuki Hirayama,Sinang Hongsanan,Sinang Hongsanan,Subashini C. Jayasiri,Ruvishika S. Jayawardena,Ruvishika S. Jayawardena,Samantha C. Karunarathna,Samantha C. Karunarathna,Wen-Jing Li,Wen-Jing Li,Ausana Mapook,Ausana Mapook,Chada Norphanphoun,Ka-Lai Pang,Rekhani H. Perera,Rekhani H. Perera,Derek Peršoh,Umpava Pinruan,Indunil C. Senanayake,Indunil C. Senanayake,Sayanh Somrithipol,Satinee Suetrong,Kazuaki Tanaka,Kasun M. Thambugala,Kasun M. Thambugala,Qing Tian,Qing Tian,Saowaluck Tibpromma,Danushka Udayanga,Danushka Udayanga,Nalin N. Wijayawardene,Nalin N. Wijayawardene,Nalin N. Wijayawardene,Dhanuska Wanasinghe,Dhanuska Wanasinghe,Komsit Wisitrassameewong,Xiang Yu Zeng,Faten A. Abdel-Aziz,Slavomír Adamčík,Ali H. Bahkali,Nattawut Boonyuen,Timur S. Bulgakov,Philippe Callac,Putarak Chomnunti,Putarak Chomnunti,Katrin Greiner,Akira Hashimoto,Akira Hashimoto,Valérie Hofstetter,Ji Chuan Kang,David P. Lewis,Xinghong Li,Xingzhong Liu,Zuo Yi Liu,Misato Matsumura,Peter E. Mortimer,Gerhard Rambold,Emile Randrianjohany,Genki Sato,Veera Sri-indrasutdhi,Cheng Ming Tian,Annemieke Verbeken,Wolfgang von Brackel,Yong Wang,Ting-Chi Wen,Jianchu Xu,Ji Ye Yan,Rui-Lin Zhao,Erio Camporesi +103 more
TL;DR: This paper is a compilation of notes on 110 fungal taxa, including one new family, 10 new genera, and 76 new species, representing a wide taxonomic and geographic range.
Journal ArticleDOI
Myconet Volume 14. Part One. Outline of Ascomycota—2009. Part Two. Notes on Ascomycete Systematics. Nos. 4751–5113
TL;DR: The current classification that includes all accepted genera and higher taxa above the generic level in the phylum Ascomycota is presented, based on the changes listed in Myconet notes 4751–5113.
Journal ArticleDOI
Multi-locus phylogeny of Pleosporales: A taxonomic, ecological and evolutionary re-evaluation
Ying Zhang,Conrad L. Schoch,Jacques Fournier,Pedro W. Crous,J. de Gruyter,J.H.C. Woudenberg,Kazuyuki Hirayama,Kazuaki Tanaka,Stephen B. Pointing,Joseph W. Spatafora,Kevin D. Hyde +10 more
TL;DR: Both ecological and morphological characters show varying degrees of phylogenetic significance in Pleosporalean taxa.
References
More filters
Journal ArticleDOI
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.
TL;DR: ClUSTAL X is a new windows interface for the widely-used progressive multiple sequence alignment program CLUSTAL W, providing an integrated system for performing multiple sequence and profile alignments and analysing the results.
Journal ArticleDOI
Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species.
Rytas Vilgalys,M Hester +1 more
TL;DR: A novel approach that uses the polymerase chain reaction (PCR) for rapid simplified restriction typing and mapping of DNA from many different isolates is described, which ought to have wide applicability for clinical detection and other studies.
Journal ArticleDOI
Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit.
TL;DR: Findings show that a slowly evolving protein-coding gene such as RPB2 is useful for diagnosing phylogenetic relationships among fungi, and suggests that fruiting body formation and forcible discharge of ascospores were characters gained early in the evolution of the Ascomycota.
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