A
Aleksey Komissarov
Researcher at Saint Petersburg State University
Publications - 32
Citations - 1105
Aleksey Komissarov is an academic researcher from Saint Petersburg State University. The author has contributed to research in topics: Genome & Biology. The author has an hindex of 14, co-authored 22 publications receiving 862 citations. Previous affiliations of Aleksey Komissarov include Russian Academy of Sciences.
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Journal ArticleDOI
Chromosomal-level assembly of the Asian seabass genome using long sequence reads and multi-layered scaffolding
Shubha Vij,Heiner Kuhl,Inna S. Kuznetsova,Inna S. Kuznetsova,Aleksey Komissarov,Andrey A. Yurchenko,Peter van Heusden,Siddharth Singh,Natascha May Thevasagayam,Sai Rama Sridatta Prakki,Kathiresan Purushothaman,Jolly M. Saju,Junhui Jiang,Stanley Kimbung Mbandi,Mario Jonas,Amy Hin Yan Tong,Sarah Mwangi,Doreen Lau,Si Yan Ngoh,Woei Chang Liew,Xueyan Shen,Lawrence S. Hon,James P Drake,Matthew Boitano,Richard Hall,Chen-Shan Chin,Ramkumar Lachumanan,Jonas Korlach,Vladimir A. Trifonov,Marsel R. Kabilov,Alexey E. Tupikin,Darrell Green,Simon Moxon,Tyler Garvin,Fritz J. Sedlazeck,Fritz J. Sedlazeck,Gregory Vurture,Gopikrishna Gopalapillai,Vinaya Kumar Katneni,Tansyn Noble,Vinod Scaria,Sridhar Sivasubbu,Dean R. Jerry,Stephen J. O'Brien,Stephen J. O'Brien,Michael C. Schatz,Michael C. Schatz,Tamas Dalmay,Stephen Turner,Si Lok,Alan Christoffels,László Orbán,László Orbán,László Orbán +53 more
TL;DR: The quality of the Asian seabass genome assembly far exceeds that of any other fish species, and will serve as a new standard for fish genomics.
Journal ArticleDOI
Genomic legacy of the African cheetah, Acinonyx jubatus.
Pavel Dobrynin,Shiping Liu,Gaik Tamazian,Zijun Xiong,Andrey A. Yurchenko,Ksenia Krasheninnikova,Sergey Kliver,Anne Schmidt-Küntzel,Klaus-Peter Koepfli,Klaus-Peter Koepfli,Warren E. Johnson,Lukas F. K. Kuderna,Raquel García-Pérez,Marc de Manuel,Ricardo M. Godinez,Aleksey Komissarov,Alexey I. Makunin,Alexey I. Makunin,Vladimir Brukhin,Weilin Qiu,Long Zhou,Fang Li,Jian Yi,Carlos A. Driscoll,Agostinho Antunes,Taras K. Oleksyk,Eduardo Eizirik,Polina L. Perelman,Polina L. Perelman,Melody E. Roelke,David E. Wildt,Mark Diekhans,Tomas Marques-Bonet,Tomas Marques-Bonet,Laurie Marker,Jong Bhak,Jun Wang,Guojie Zhang,Stephen J. O'Brien,Stephen J. O'Brien +39 more
TL;DR: In this article, the genome sequence of wild-born African cheetahs reveals extreme genomic depletion in SNV incidence, SNV density, SNVs of coding genes, MHC class I and II genes, and mitochondrial DNA SNVs.
Journal ArticleDOI
Genome-wide signatures of complex introgression and adaptive evolution in the big cats
Henrique V. Figueiró,Gang Li,Fernanda J. Trindade,Juliana G Assis,Fabiano Sviatopolk-Mirsky Pais,Gabriel Fernandes,Sarah Helen Dias dos Santos,Graham M. Hughes,Aleksey Komissarov,Agostinho Antunes,Cristine Silveira Trinca,Maíra R. Rodrigues,Tyler Linderoth,Ke Bi,Leandro Silveira,Fernando Cesar Cascelli de Azevedo,Daniel Luis Zanella Kantek,Emiliano Esterci Ramalho,Ricardo Augusto Brassaloti,Priscilla Marqui Schmidt Villela,Adauto Luis Veloso Nunes,Rodrigo Hidalgo Friciello Teixeira,Ronaldo Gonçalves Morato,Damian Loska,Patricia Saragüeta,Toni Gabaldón,Toni Gabaldón,Emma C. Teeling,Stephen J. O'Brien,Rasmus Nielsen,Luiz Lehmann Coutinho,Guilherme Oliveira,William J. Murphy,Eduardo Eizirik +33 more
TL;DR: Findings indicate that post-speciation admixture has contributed genetic material that facilitated the adaptive evolution of big cat lineages.
Journal ArticleDOI
Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi
Xiaofang Jiang,Ashley Peery,A. Brantley Hall,Atashi Sharma,Xiao Guang Chen,Robert M. Waterhouse,Aleksey Komissarov,Aleksey Komissarov,Michelle M. Riehle,Yogesh S. Shouche,Maria V. Sharakhova,Daniel Lawson,Nazzy Pakpour,Peter Arensburger,Victoria L.M. Davidson,Karin Eiglmeier,Karin Eiglmeier,Scott J. Emrich,Phillip George,Ryan C. Kennedy,Shrinivasrao P. Mane,Gareth Maslen,Chioma Oringanje,Yumin Qi,Robert E. Settlage,Marta Tojo,Jose M. C. Tubio,Maria F. Unger,Bo Wang,Kenneth D. Vernick,Kenneth D. Vernick,José M. C. Ribeiro,Anthony A. James,Kristin Michel,Kristin Michel,Michael A. Riehle,Shirley Luckhart,Igor V. Sharakhov,Zhijian Tu +38 more
TL;DR: The genome sequence and annotation of the Indian strain of the type form of An.
Journal ArticleDOI
Pangolin genomes and the evolution of mammalian scales and immunity
Siew Choo,Mike Rayko,Tze King Tan,Ranjeev Hari,Aleksey Komissarov,Wei Yee Wee,Andrey A. Yurchenko,Sergey Kliver,Gaik Tamazian,Agostinho Antunes,Richard K. Wilson,Wesley C. Warren,Klaus-Peter Koepfli,Patrick Minx,Ksenia Krasheninnikova,Antoinette Kotze,Desiré L. Dalton,Elaine Vermaak,Ian C. Paterson,Pavel Dobrynin,Frankie Thomas Sitam,Jeffrine J. Rovie-Ryan,Warren E. Johnson,Aini Mohamed Yusoff,Shu-Jin Luo,Kayal Vizi Karuppannan,Gang Fang,Deyou Zheng,Mark Gerstein,Leonard Lipovich,Stephen J. O'Brien,Guat Jah Wong +31 more
TL;DR: It is proposed that scale development was an innovation that provided protection against injuries or stress and reduced pangolin vulnerability to infection, and perhaps a new natural IFNE-deficient animal model for studying mammalian immunity.