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Chris Dunham
Researcher at University of British Columbia
Publications - 6
Citations - 561
Chris Dunham is an academic researcher from University of British Columbia. The author has contributed to research in topics: Genome & Diffusion MRI. The author has an hindex of 4, co-authored 6 publications receiving 471 citations.
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Journal ArticleDOI
Genomic analysis of diffuse intrinsic pontine gliomas identifies three molecular subgroups and recurrent activating ACVR1 mutations
Pawel Buczkowicz,Christine M. Hoeman,Patricia Rakopoulos,Sanja Pajovic,Louis Letourneau,Misko Dzamba,Andrew Morrison,Peter W. Lewis,Eric Bouffet,Ute Bartels,Jennifer Zuccaro,Sameer Agnihotri,Scott Ryall,Mark Barszczyk,Yevgen Chornenkyy,Mathieu Bourgey,Guillaume Bourque,Alexandre Montpetit,Francisco Cordero,Pedro Castelo-Branco,Joshua Mangerel,Uri Tabori,King Ching Ho,Annie Huang,Kathryn R. Taylor,Alan Mackay,Anne Bendel,Javad Nazarian,Jason Fangusaro,Matthias A. Karajannis,David Zagzag,Nicholas K. Foreman,Andrew M. Donson,Julia V Hegert,Amy Smith,Jennifer A. Chan,Lucy Lafay-Cousin,Sandra E. Dunn,Juliette Hukin,Chris Dunham,Katrin Scheinemann,Jean Michaud,Shayna Zelcer,David A. Ramsay,Jason E. Cain,Cameron Brennan,Mark M. Souweidane,Chris Jones,C. David Allis,Michael Brudno,Michael Brudno,Oren J. Becher,Cynthia Hawkins +52 more
TL;DR: This work integrated whole-genome sequencing with methylation, expression and copy number profiling, discovering that DIPGs comprise three molecularly distinct subgroups (H3-K27M, silent and MYCN) and uncovering a new recurrent activating mutation affecting the activin receptor gene ACVR1 in 20% of DIPG.
Journal ArticleDOI
Diffusion-weighted imaging and pathological correlation in pediatric medulloblastomas—“They are not always restricted!”
TL;DR: DWI does not appear to be an entirely reliable means of distinguishing medulloblastomas from other cerebellar neoplasms.
Journal ArticleDOI
Comparative RNA-Sequencing Analysis Benefits a Pediatric Patient With Relapsed Cancer.
Yulia Newton,S. Rod Rassekh,Rebecca J. Deyell,Yaoqing Shen,Martin R. Jones,Chris Dunham,Stephen Yip,Sreeja Leelakumari,Jingchun Zhu,Duncan McColl,Teresa Swatloski,Sofie R. Salama,Tony Ng,Glenda Hendson,Anna F. Lee,Yussanne Ma,Richard D. Moore,Andrew J. Mungall,David Haussler,Joshua M. Stuart,Colleen Jantzen,Janessa Laskin,Steven J.M. Jones,Marco A. Marra,Olena Morozova +24 more
TL;DR: This case is used to describe a framework for inclusion of gene expression into the clinical genomic evaluation of pediatric tumors, and describes a child with a rare sarcoma that was profiled with whole-genome and RNA sequencing (RNA-Seq) techniques.
Journal ArticleDOI
High grade gliomas
Alexis Leonard,Johannes Wolff,Rajarshi Sengupta,Jayne Marassa,David Piwnica-Worms,Joshua B. Rubin,Ian F. Pollack,Regina I. Jakacki,Lisa H. Butterfield,Hideho Okada,Jason Fangusaro,Katherine E. Warren,Christina Mullins,Piek Jürgen,Schubert Julia,Classen Carl Friedrich,Stephen T. Keir,Julia R. Saling,Martin A. Roskoski,Henry S. Friedman,Darell D. Bigner,Christopher L. Moertel,Michael R. Olin,Tambra Dahlheimer,Michael P. Gustafson,Darin Sumstad,David H. McKenna,Walter C. Low,David Nascene,A. Dietz,John R. Ohlfest,Dominik Sturm,Hendrik Witt,Volker Hovestadt,Dong Anh Khuong Quan,David T.W. Jones,Carolin Konermann,Elke Pfaff,Andrey Korshunov,Marina Rizhova,Till Milde,Olaf Witt,Marc Zapatka,V. Peter Collins,Marcel Kool,Guido Reifenberger,Peter Lichter,Anders Lindroth,Christoph Plass,Nada Jabado,Stefan M. Pfister,Barry Pizer,Alireza Salehzadeh,Andrew Brodbelt,Conor Mallucci,María Sol Brassesco,Julia Pezuk,Andressa Morales,Jaqueline de Oliveira,Gabriela Molinari Roberto,Kazuo Umezawa,Elvis Valera,Eduardo Magalhães Rego,Carlos Alberto Scrideli,Luiz Gonzaga Tone,Susanna J.E. Veringa,Dannis G. van Vuurden,Pieter Wesseling,W. Peter Vandertop,David P. Noske,Thomas Wurdinger,Gertjan J.L. Kaspers,Esther Hulleman,Karen Wright,Alberto Broniscer,Anne Bendel,Daniel C. Bowers,John Robertson Crawford,Paul G. Fisher,Tim Hassall,Gregory T. Armstrong,Justin N. Baker,Ibrahim Qaddoumi,Giles W. Robinson,Cynthia Wetmore,Paul Klimo,Frederick A. Boop,Arzu Onar-Thomas,David W. Ellison,Amar Gajjar,Ofelia Cruz,Carmen de Torres,Mariona Suñol,Eva Peguero Rodríguez,Laura Alonso,Andreu Parareda,Teresa Cardesa,Hector Salvador,Veronica Celis,A. Guillen,Gemma Garcia,Jordi Muchart,Carlos Trampal,Maria Luisa Martin,Monica Rebollo,Jaume Mora,Anna F. Piotrowski,Agnes Kowalska,Patricia Coyle,Stuart Smith,Hazel A. Rogers,Donald Macarthur,Richard Grundy,Diane Puccetti,Shahriar Salamat,Tabassum A. Kennedy,Neha Patel,Kristin A. Bradley,Kristin Casey,Bermans J. Iskandar,Yoshiko Nakano,Keiko Okada,Yuko Osugi,Kai Yamasaki,Hiroyuki Fujisaki,Hiroko Fukushima,Takeshi Inoue,Yasuhiro Matsusaka,Hiroaki Sakamoto,Junichi Hara,Steven De Vleeschouwer,Hilko Ardon,Frank Van Calenbergh,Raf Sciot,Guido Wilms,Johan van Loon,Jan Goffin,Stefaan Van Gool,David Rusinak,Peter Knight,Kenan Onel,David S. Wargowski,Amy Stettner,Ayat B. Al-Ghafari,Wiyada Punjaruk,Beth Coyle,Ian D. Kerr,Enric Xipell,María Rodriguez,Marisol Gonzalez-Huarriz,María Teresa Tuñon,Idoya Zazpe,Sonia Tejada-Solís,Ricardo Díez-Valle,Juan Fueyo,Candelaria Gomez-Manzano,Marta M. Alonso,Devang Pastakia,Cynthia McCully,Robert L. Murphy,John Bacher,Marvin L. Thomas,Emilie A. Steffen-Smith,Kadharbatcha S. Saleem,Stuart Waldbridge,Brigitte C. Widemann,Katherine Warren,Evelina Miele,Francesca R. Buttarelli,Antonella Arcella,Federica Begalli,Agnese Po,Caterina Baldi,G. Carissimo,Manila Antonelli,V. Donofrio,I. Morra,Paolo Nozza,Alberto Gulino,Felice Giangaspero,Elisabetta Ferretti,Iris Elens,Femke Pauwels,Sara Fritzell,Sofia Eberstål,Emma Sandén,Edward Visse,Anna Darabi,Peter Siesjö,Patrick J. McDonald,Jens Wrogemann,Sherry Krawitz,Marc R. Del Bigio,David D. Eisenstat,Robert Kwiecien,Torsten Pietsch,Andreas Faldum,RD Kortmann,M. Warmuth-Metz,Stefan Rutkowski,Irene Slavc,Christof M. Kramm,Urmila Uparkar,Russell Geyer,Ralph P. Ermoian,Richard G. Ellenbogen,Sarah Leary,Joanna Triscott,Kaiji Hu,Abbas Fotovati,Stephen Yip,Richard E. Kast,Brian Toyota,Sandra E. Dunn,Meenakshi Hegde,Amanda Corder,Kevin Chow,Malini Mukherjee,Aidin Ashoori,Vita Brawley,Helen E. Heslop,Stephen Gottschalk,Eric Yvon,Nabil Ahmed,Tai-Tong Wong,Feng-Yi Yang,Maggie Lu,Hsiang-Fa Liang,Hsin-Ell Wang,Ren-Shyan Liu,Ming-Che Teng,Chuek-Chuan Yen,Sameer Agnihotri,Christian Ternamian,Chris Jones,Gelareh Zadeh,James T. Rutka,Cynthia Hawkins,Iwona Filipek,Monika Drogosiewicz,Marta Perek-Polnik,Ewa Swieszkowska,Bozenna Dembowska Baginska,Elzbieta Jurkiewicz,Danuta Perek,Alexander Kuehn,Fabian Falkenstein,Astrid Gnekow,Christof Kramm,Michael D. Brooks,Erin Jackson,Robi D. Mitra,Joshua B. Rubin,Xiao-Yang Liu,Jeremy Schwartzentruber,Adam M. Fontebasso,Dong-Anh Khuong Quang,Steffen Albrecht,Zhifeng Dong,Peter M. Siegel,Andreas Von Diemling,Damien Faury,Uri Tabori,Jacek Majewski,Rishi Lulla,María E. Echevarría,Tord D. Alden,Arthur J DiPatri,Tadanori Tomita,Stewart Goldman,Tong Lin,Thomas E. Merchant,Mehmet Kocak,Atmaram S. Pai Panandiker,Gregory T. Armstrong,Gerrit H. Gielen,Anja zur Muehlen,CM Kramm,Christopher Hubert,Yu Ding,Chad Toledo,Patrick J. Paddison,James M. Olson,Meera Nandhabalan,Lynn Bjerke,Dorine A. Bax,Diana Carvalho,I. Bajrami,Alan Ashworth,Christopher J. Lord,Darren Hargrave,Rui Manuel Reis,Paul Workman,Suzie Little,Sergey Popov,Alexa Jury,Anna Burford,Lawrence Doey,Safa Al-Sarraj,Juliane M. Jürgensmeier,Lina Chen,Iwanka Kozarewa,Suzanne J. Baker,Lara Perryman,Gary Box,Florence I. Raynaud,Suzanne A. Eccles,Marta Viana-Pereira,Márcia Santos Pereira,Tim Forshew,Ruth G. Tatevossian,Denise Sheer,Jose Pimental,Manuel Pires,Chitra Sarkar,Prerana Jha,Irene Rose Pia Patrick,Kumar Somasundaram,Pankaj Pathak,Mehar Chand Sharma,Vaishali Suri,Ashish Suri,Noha Gerges,Takrima Haque,Andre Nantel,Cathy Lee,James Chen,Chitra Venugopal,Ash Singhal,Chris Dunham,John H. Kerr,Maite Verreault,Hiro Wakimoto,Aarthi Jayanthan,Aru Narendran,Sheila K. Singh,Géraldine Giraud,Stefan Holm,Bengt Gustavsson,Roman Kizyma,Zoryana Kizyma,Lesya Dvornyak,Bogdan Kotsay,Sridhar Epari,Praveen Sharma,Mamta Gurav,Tejpal Gupta,Prakash Shetty,Aliasgar Moiyadi,Shubhada Kane,Rakesh Jalali +350 more
TL;DR: Methylation of the promoter for the MGMT gene predicts for increased sensitivity to DNA alkylat ing agents such as temozolomide and is prognostic for overall survival (OS) in patients with GBM, especially older patients.
Journal ArticleDOI
NTRK2 Fusion driven pediatric glioblastoma: Identification of oncogenic Drivers via integrative Genome and transcriptome profiling.
Heidi Britton,Adrian B. Levine,Yaoqing Shen,Karen Mungall,Jonathan Serrano,Matija Snuderl,Erin Pleasance,Steven J.M. Jones,Janessa Laskin,Marco A. Marra,Shahrad Rod Rassekh,Rebecca J. Deyell,Stephen Yip,Sylvia Cheng,Chris Dunham +14 more
TL;DR: The first report of a NACC2-NTRK2 fusion in a histological glioblastoma was reported in this article. But this fusion was performed in a pediatric cerebellar brain tumor, which would not have been identified through routine diagnostics.