F
François Enault
Researcher at University of Auvergne
Publications - 48
Citations - 3585
François Enault is an academic researcher from University of Auvergne. The author has contributed to research in topics: Genome & Metagenomics. The author has an hindex of 19, co-authored 40 publications receiving 2658 citations. Previous affiliations of François Enault include Blaise Pascal University & Centre national de la recherche scientifique.
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Journal ArticleDOI
VirSorter: mining viral signal from microbial genomic data
TL;DR: VirSorter is a tool designed to detect viral signal in these different types of microbial sequence data in both a reference-dependent and reference-independent manner, leveraging probabilistic models and extensive virome data to maximize detection of novel viruses.
Journal ArticleDOI
Minimum information about an uncultivated virus genome (MIUVIG)
Simon Roux,Evelien M. Adriaenssens,Bas E. Dutilh,Eugene V. Koonin,Andrew M. Kropinski,Mart Krupovic,Jens H. Kuhn,Rob Lavigne,J. Rodney Brister,Arvind Varsani,Arvind Varsani,Clara Amid,Ramy K. Aziz,Seth R. Bordenstein,Peer Bork,Mya Breitbart,Guy Cochrane,Rebecca A. Daly,Christelle Desnues,Melissa B. Duhaime,Joanne B. Emerson,François Enault,Jed A. Fuhrman,Pascal Hingamp,Philip Hugenholtz,Bonnie L. Hurwitz,Natalia Ivanova,Jessica M. Labonté,Kyung Bum Lee,Rex R. Malmstrom,Manuel Martinez-Garcia,Ilene Karsch Mizrachi,Hiroyuki Ogata,David Paez-Espino,Marie-Agnès Petit,Catherine Putonti,Thomas Rattei,Alejandro Reyes,Francisco Rodriguez-Valera,Karyna Rosario,Lynn M. Schriml,Frederik Schulz,Grieg F. Steward,Matthew B. Sullivan,Shinichi Sunagawa,Curtis A. Suttle,Ben Temperton,Susannah G. Tringe,Rebecca Vega Thurber,Nicole S. Webster,Nicole S. Webster,Katrine Whiteson,Steven W. Wilhelm,K. Eric Wommack,Tanja Woyke,Kelly C. Wrighton,Pelin Yilmaz,Takashi Yoshida,Mark J. Young,Natalya Yutin,Lisa Zeigler Allen,Lisa Zeigler Allen,Nikos C. Kyrpides,Emiley A. Eloe-Fadrosh +63 more
TL;DR: The MIUViG (Minimum Information about an Uncultivated Virus Genome) as mentioned in this paper standard was developed within the Genomic Standards Consortium framework and includes virus origin, genome quality, genome annotation, taxonomic classification, biogeographic distribution and in silico host prediction.
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Phages rarely encode antibiotic resistance genes: a cautionary tale for virome analyses
TL;DR: Findings provide guidance for documentation of ARG in viromes, and reassert that ARGs are rarely encoded in phage genomes, which were previously overestimated.
Journal ArticleDOI
Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee
Mart Krupovic,Bas E. Dutilh,Bas E. Dutilh,Bas E. Dutilh,Evelien M. Adriaenssens,Johannes Wittmann,Finn K. Vogensen,Mathew B. Sullivan,Janis Rumnieks,David Prangishvili,Rob Lavigne,Andrew M. Kropinski,Jochen Klumpp,Annika Gillis,François Enault,Robert Edwards,Siobain Duffy,Martha R C Clokie,Jakub Barylski,Hans-Wolfgang Ackermann,Jens H. Kuhn +20 more
TL;DR: Highlights include the creation of a new order, 10 families, 22 subfamilies, 424 genera and 964 species in the ICTV's Bacterial and Archaeal Viruses Subcommittee for the years 2018 and 2019.
Journal ArticleDOI
Assessing the diversity and specificity of two freshwater viral communities through metagenomics
Simon Roux,Simon Roux,François Enault,François Enault,Agnès Robin,Agnès Robin,Viviane Ravet,Viviane Ravet,Sébastien Personnic,Sébastien Personnic,Sébastien Theil,Sébastien Theil,Jonathan Colombet,Jonathan Colombet,Télesphore Sime-Ngando,Télesphore Sime-Ngando,Didier Debroas,Didier Debroas +17 more
TL;DR: The two freshwater viromes appear closely related, despite the significant ecological differences between the two lakes, and appear genetically distinct from other aquatic ecosystems, demonstrating the specificity of freshwater viruses at a community scale for the first time.