M
Matthias Zytnicki
Researcher at Institut national de la recherche agronomique
Publications - 41
Citations - 4647
Matthias Zytnicki is an academic researcher from Institut national de la recherche agronomique. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 21, co-authored 40 publications receiving 4207 citations. Previous affiliations of Matthias Zytnicki include Kansas State University & Université Paris-Saclay.
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Journal ArticleDOI
Long Noncoding RNAs with Enhancer-like Function in Human Cells
Ulf Andersson Ørom,Thomas Derrien,Malte Beringer,Kiranmai Gumireddy,Alessandro Gardini,Giovanni Bussotti,Fan Lai,Matthias Zytnicki,Cedric Notredame,Qihong Huang,Roderic Guigó,Ramin Shiekhattar,Ramin Shiekhattar +12 more
TL;DR: An unanticipated role for a class of long ncRNAs in activation of critical regulators of development and differentiation is found in human cell lines.
Journal ArticleDOI
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
Klaus F. X. Mayer,Jane Rogers,Jaroslav Doležel,Curtis J. Pozniak,Kellye Eversole,Catherine Feuillet,Bikram S. Gill,Bernd Friebe,Adam J. Lukaszewski,Pierre Sourdille,Takashi R. Endo,M. Kubaláková,Jarmila Číhalíková,Zdeňka Dubská,Jan Vrána,Romana Šperková,Hana Šimková,Melanie Febrer,Leah Clissold,Kirsten McLay,Kuldeep Singh,Parveen Chhuneja,Nagendra K. Singh,Jitendra P. Khurana,Eduard Akhunov,Frédéric Choulet,Adriana Alberti,Valérie Barbe,Patrick Wincker,Hiroyuki Kanamori,Fuminori Kobayashi,Takeshi Itoh,Takashi Matsumoto,Hiroaki Sakai,Tsuyoshi Tanaka,Jianzhong Wu,Yasunari Ogihara,Hirokazu Handa,P. Ron Maclachlan,Andrew G. Sharpe,Darrin Klassen,David Edwards,Jacqueline Batley,Odd-Arne Olsen,Simen Rød Sandve,Sigbjørn Lien,Burkhard Steuernagel,Brande B. H. Wulff,Mario Caccamo,Sarah Ayling,Ricardo H. Ramirez-Gonzalez,Bernardo J. Clavijo,Jonathan M. Wright,Matthias Pfeifer,Manuel Spannagl,Mihaela Martis,Martin Mascher,Jarrod Chapman,Jesse Poland,Uwe Scholz,Kerrie Barry,Robbie Waugh,Daniel S. Rokhsar,Gary J. Muehlbauer,Nils Stein,Heidrun Gundlach,Matthias Zytnicki,Véronique Jamilloux,Hadi Quesneville,Thomas Wicker,Primetta Faccioli,Moreno Colaiacovo,Antonio Michele Stanca,Hikmet Budak,Luigi Cattivelli,Natasha Glover,Lise Pingault,Etienne Paux,Sapna Sharma,Rudi Appels,Matthew I. Bellgard,Brett Chapman,Thomas Nussbaumer,Kai Christian Bader,Hélène Rimbert,Shichen Wang,Ron Knox,Andrzej Kilian,Michael Alaux,Françoise Alfama,Loïc Couderc,Nicolas Guilhot,Claire Viseux,Mikaël Loaec,Beat Keller,Sébastien Praud +95 more
TL;DR: Insight into the genome biology of a polyploid crop provide a springboard for faster gene isolation, rapid genetic marker development, and precise breeding to meet the needs of increasing food demand worldwide.
Journal ArticleDOI
Identification of a novel microRNA (miRNA) from rice that targets an alternatively spliced transcript of the Nramp6 (Natural resistance-associated macrophage protein 6) gene involved in pathogen resistance
Sonia Campo,Cristina Peris-Peris,Christelle Siré,Ana Moreno,Livia Donaire,Matthias Zytnicki,Cedric Notredame,César Llave,Blanca San Segundo +8 more
TL;DR: A new rice miRNA is reported, osa-miR7695, which negatively regulates an alternatively spliced transcript of OsNramp6 (Natural resistance-associated macrophage protein 6), and its overexpression in rice confers pathogen resistance.
Proceedings Article
Existential arc consistency: getting closer to full arc consistency in weighted CSPs
TL;DR: This paper introduces a new stronger form of arc consistency, that is called existential directional arc consistency and provides an algorithm to enforce it and the efficiency of the algorithm is empirically demonstrated in a variety of domains.
Journal ArticleDOI
Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation
Eva-Maria Willing,Vimal Rawat,Terezie Mandáková,Florian Maumus,Geo Velikkakam James,Karl Nordström,Karl Nordström,Claude Becker,Norman Warthmann,Norman Warthmann,Claudia Chica,Claudia Chica,Bogna Szarzynska,Bogna Szarzynska,Matthias Zytnicki,Maria C. Albani,Maria C. Albani,Christiane Kiefer,Sara Bergonzi,Sara Bergonzi,Loren Castaings,Loren Castaings,Julieta L. Mateos,Julieta L. Mateos,Markus C. Berns,Nora Bujdoso,Thomas Piofczyk,Laura de Lorenzo,Laura de Lorenzo,Cristina Barrero-Sicilia,Cristina Barrero-Sicilia,I. Mateos,Mathieu Piednoël,Jörg Hagmann,Romy Chen-Min-Tao,Romy Chen-Min-Tao,Raquel Iglesias-Fernández,Stephan C. Schuster,Carlos Alonso-Blanco,François Roudier,Pilar Carbonero,Javier Paz-Ares,Seth J. Davis,Seth J. Davis,Ales Pecinka,Hadi Quesneville,Vincent Colot,Martin A. Lysak,Detlef Weigel,George Coupland,Korbinian Schneeberger +50 more
TL;DR: A de novo assembly for the 375 Mb genome of the perennial model plant, Arabis alpina, revealed long-lasting and recent transposable element activity predominately driven by Gypsy long terminal repeat retrotransposons, which extended the low-recombining pericentromeres and transformed large formerly euchromatic regions into repeat-rich pericentromeric regions.