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Showing papers by "Indonesian Institute of Sciences published in 2015"


Journal ArticleDOI
TL;DR: The present paper introduces the FoF database to the scientific community and briefly reviews some of the problems associated with classification and identification of the main fungal groups.
Abstract: Taxonomic names are key links between various databases that store information on different organisms. Several global fungal nomenclural and taxonomic databases (notably Index Fungorum, Species Fungorum and MycoBank) can be sourced to find taxonomic details about fungi, while DNA sequence data can be sourced from NCBI, EBI and UNITE databases. Although the sequence data may be linked to a name, the quality of the metadata is variable and generally there is no corresponding link to images, descriptions or herbarium material. There is generally no way to establish the accuracy of the names in these genomic databases, other than whether the submission is from a reputable source. To tackle this problem, a new database (FacesofFungi), accessible at www.facesoffungi.org (FoF) has been established. This fungal database allows deposition of taxonomic data, phenotypic details and other useful data, which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification system. In addition, the database will also allow access to comprehensive metadata including descriptions of voucher and type specimens. This database is user-friendly, providing links and easy access between taxonomic ranks, with the classification system based primarily on molecular data (from the literature and via updated web-based phylogenetic trees), and to a lesser extent on morphological data when molecular data are unavailable. In FoF species are not only linked to the closest phylogenetic representatives, but also relevant data is provided, wherever available, on various applied aspects, such as ecological, industrial, quarantine and chemical uses. The data include the three main fungal groups (Ascomycota, Basidiomycota, Basal fungi) and fungus-like organisms. The FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological expertise. The webpage has 76 curators, and with the help of these specialists, FoF will provide an updated natural classification of the fungi, with illustrated accounts of species linked to molecular data. The present paper introduces the FoF database to the scientific community and briefly reviews some of the problems associated with classification and identification of the main fungal groups. The structure and use of the database is then explained. We would like to invite all mycologists to contribute to these web pages.

458 citations


Journal ArticleDOI
TL;DR: The combined application of BCAs and their substrates was shown to more effectively suppress bacterial wilt in the tomato and the importance of integrated pest management (IPM) foracterial wilt diseases was focused on.
Abstract: Previous studies have described the development of control methods against bacterial wilt diseases caused by Ralstonia solanacearum. This review focused on recent advances in control measures, such as biological, physical, chemical, cultural, and integral measures, as well as biocontrol efficacy and suppression mechanisms. Biological control agents (BCAs) have been dominated by bacteria (90%) and fungi (10%). Avirulent strains of R. solanacearum, Pseudomonas spp., Bacillus spp., and Streptomyces spp. are well-known BCAs. New or uncommon BCAs have also been identified such as Acinetobacter sp., Burkholderia sp., and Paenibacillus sp. Inoculation methods for BCAs affect biocontrol efficacy, such as pouring or drenching soil, dipping of roots, and seed coatings. The amendment of different organic matter, such as plant residue, animal waste, and simple organic compounds, have frequently been reported to suppress bacterial wilt diseases. The combined application of BCAs and their substrates was shown to more effectively suppress bacterial wilt in the tomato. Suppression mechanisms are typically attributed to the antibacterial metabolites produced by BCAs or those present in natural products; however, the number of studies related to host resistance to the pathogen is increasing. Enhanced/modified soil microbial communities are also indirectly involved in disease suppression. New promising types of control measures include biological soil disinfection using substrates that release volatile compounds. This review described recent advances in different control measures. We focused on the importance of integrated pest management (IPM) for bacterial wilt diseases.

343 citations


Journal ArticleDOI
TL;DR: It is shown that most tree species are extremely rare, meaning that they may be under serious risk of extinction at current deforestation rates, and a methodological framework for estimating species richness in trees is provided that may help refine species richness estimates of tree-dependent taxa.
Abstract: The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, we use a fitted value of Fisher's alpha and an approximate pantropical stem total to estimate the minimum number of tropical forest tree species to fall between similar to 40,000 and similar to 53,000, i.e., at the high end of previous estimates. Contrary to common assumption, the Indo-Pacific region was found to be as species-rich as the Neotropics, with both regions having a minimum of similar to 19,000-25,000 tree species. Continental Africa is relatively depauperate with a minimum of similar to 4,500-6,000 tree species. Very few species are shared among the African, American, and the Indo-Pacific regions. We provide a methodological framework for estimating species richness in trees that may help refine species richness estimates of tree-dependent taxa.

338 citations


Journal ArticleDOI
01 Feb 2015-Geology
TL;DR: This paper showed that Ca 2+, Mg 2+ and silica in seawater control phosphorus sorption onto iron oxides, influencing the record of seawater phosphorus preserved in banded iron formations (BIFs).
Abstract: As a nutrient required for growth, phosphorus regulates the activity of life in the oceans. Iron oxides sorb phosphorus from seawater, and through the Archean and early Proterozoic Eons, massive quantities of iron oxides precipitated from the oceans, producing a record of seawater chemistry that is preserved as banded iron formations (BIFs) today. Here we show that Ca 2+ , Mg 2+ , and silica in seawater control phosphorus sorption onto iron oxides, influencing the record of seawater phosphorus preserved in BIFs. Using a model for seawater cation chemistry through time, combined with the phosphorus and silica content of BIFs, we estimate that seawater in the Archean and early Proterozoic Eons likely contained 0.04–0.13 µM phosphorus, on average. These phosphorus limiting conditions could have favored primary production through photoferrotrophy at the expense of oxygenic photosynthesis until upwelling waters shifted from phosphorus to iron limiting.

170 citations


Journal ArticleDOI
TL;DR: The prospective role of flavonoids as antioxidant is enlightened, which may lead drug discovery with novel and potential therapeutic evidence.
Abstract: Flavonoids represent a remarkable group of plant secondary metabolites and have long been used as traditional medicines with scientifically proven pharmacological benefits. They serve vast-ranging medicinal activities that may lead drug discovery with novel and potential therapeutic evidence. Latest research magnifies primarily functional activity of flavonoids as antioxidant against oxidative stress. This review enlightens the prospective role of flavonoids as antioxidant.

163 citations


Journal ArticleDOI
TL;DR: In this paper, the influence of the palm kernel oil based polyester polyol content on reaction kinetics, structure, morphology and mechanical properties of rigid polyurethane foam were evaluated by cup test, Fourier transform infra-red spectroscopy, optical microscopy, and compression testing.

149 citations


Journal ArticleDOI
TL;DR: In this article, two methods of enzymatic hydrolysis, separated Hydrolysis and Fermentation (SHF) and Simultaneous Saccharification, Fermentation, and SFC (SSF) were carried out in this study and the performance of both SHF and SSF was concerned to evaluate the effect of enzymes and enzyme concentration for producing ethanol.

136 citations


Journal ArticleDOI
TL;DR: In this article, the authors introduce the goals and functions of scenarios in general and reflect on the current global debate around shared socio-economic pathways (SSPs), and examine the options and constraints of scenario methods for risk and vulnerability assessments in the context of climate change and natural hazards.
Abstract: Most scientific assessments for climate change adaptation and risk reduction are based on scenarios for climatic change. Scenarios for socio-economic development, particularly in terms of vulnerability and adaptive capacity, are largely lacking. This paper focuses on the utility of socio-economic scenarios for vulnerability, risk and adaptation research. The paper introduces the goals and functions of scenarios in general and reflects on the current global debate around shared socio-economic pathways (SSPs). It examines the options and constraints of scenario methods for risk and vulnerability assessments in the context of climate change and natural hazards. Two case studies are used to contrast the opportunities and current constraints in scenario methods at different scales: the global WorldRiskIndex, based on quantitative data and indicators; and a local participatory scenario development process in Jakarta, showing a qualitative approach. The juxtaposition of a quantitative approach with global data and a qualitative-participatory local approach provides new insights on how different methods and scenario techniques can be applied in vulnerability and risk research.

113 citations


Journal ArticleDOI
TL;DR: In this paper, the authors explored the ability of satellite altimetry to monitor small water bodies in Indonesia and found that satellite-altimetry provided a good alternative or the only means in some regions of measuring the water level of medium-sized rivers and small lakes with high accuracy.
Abstract: Remote sensing and satellite geodetic observations are capable of hydrologic monitoring of freshwater resources. Although satellite radar altimetry has been used in monitoring water level or discharge, its use is often limited to monitoring large rivers (>1 km) with longer interval periods (>1 week) because of its low temporal and spatial resolutions (i.e., satellite revisit period). Several studies have reported successful retrieval of water levels for small rivers as narrow as 40 m. However, processing current satellite altimetry signals for such small water bodies to retrieve water levels accurately remains challenging. Physically, the radar signal returned by water bodies smaller than the satellite footprint is most likely contaminated by non-water surfaces, which may degrade the measurement quality. In order to address this scientific challenge, we carefully selected the waveform shapes corresponding to the range measurement resulting from standard retrackers for the European Space Agency's (ESA's) Envisat (Environmental Satellite) radar altimetry. We applied this approach to small (40–200 m in width) and medium-sized (200–800 m in width) rivers and small lakes (extent 2 ) in the humid tropics of Southeast Asia, specifically in Indonesia. This is the first study that explored the ability of satellite altimetry to monitor small water bodies in Indonesia. The major challenges in this study include the size of the water bodies that are much smaller than the nominal extent of the Envisat satellite footprint (e.g., ~250 m compared to ~1.7 km, respectively) and slightly smaller than the along-track distance (i.e., ~370 m). We addressed this challenge by optimally using geospatial information and optical remote sensing data to define the water bodies accurately, thus minimizing the probability of non-water contamination in the altimetry measurement. Considering that satellite altimetry processing may vary with different geographical regions, meteorological conditions, or hydrologic dynamic, we further evaluated the performance of all four Envisat standard retracking procedures. We found that satellite altimetry provided a good alternative or the only means in some regions of measuring the water level of medium-sized rivers and small lakes with high accuracy (root mean square error (RMSE) of 0.21–0.69 m and a correlation coefficient of 0.94–0.97). In contrast to previous studies, we found that the commonly used Ice-1 retracking algorithm was not necessarily the best retracker among the four standard waveform retracking algorithms for Envisat radar altimetry observing inland water bodies. As a recommendation, we propose to include the identification and selection of standard waveform shapes to complete the use of standard waveform retracking algorithms for Envisat radar altimetry data over small and medium-sized rivers and small lakes.

97 citations


Journal ArticleDOI
TL;DR: In this article, the authors reviewed the Indonesian policy framework for coastal and marine policy interventions that either directly or indirectly address different dimensions of coastal livelihood vulnerability and found that the policy environment for addressing coastal livelihood vulnerabilities is heavily based on developing adaptive capacity and to a certain extent sensitivity without adequately addressing exposure, the initial cause of vulnerability.

88 citations


Journal ArticleDOI
TL;DR: In this paper, the authors examined whether market data and expert opinion could be used to identify bird species that may be at risk from the trade in Indonesia and found that severely declining species have a significantly different price-volume signal than stable/increasing species.

Journal ArticleDOI
TL;DR: In this article, LiFePO4 is the most suitable battery and electric double-layer capacitor (EDLC) was the most appropriate ultracapacitor for MCS application.

Journal ArticleDOI
TL;DR: In this article, the authors improved constraints on the slip distribution and geometry of faults involved in the complex, multisegment, Mw 8.6 April 2012 Wharton Basin earthquake sequence by joint inversion of high-rate GPS data from the Sumatran GPS Array (SuGAr), teleseismic observations, source time functions from broadband surface waves, and far-field static GPS displacements.
Abstract: We improve constraints on the slip distribution and geometry of faults involved in the complex, multisegment, Mw 8.6 April 2012 Wharton Basin earthquake sequence by joint inversion of high-rate GPS data from the Sumatran GPS Array (SuGAr), teleseismic observations, source time functions from broadband surface waves, and far-field static GPS displacements. This sequence occurred under the Indian Ocean, ∼400 km offshore Sumatra. The events are extraordinary for their unprecedented rupture of multiple cross faults, deep slip, large strike-slip magnitude, and potential role in the formation of a discrete plate boundary between the Indian and Australian plates. The SuGAr recorded static displacements of up to ∼22 cm, along with time-varying arrivals from the complex faulting, which indicate that the majority of moment release was on young, WNW trending, right-lateral faults, counter to initial expectations that an old, lithospheric, NNE trending fracture zone played the primary role. The new faults are optimally oriented to accommodate the present-day stress field. Not only was the greatest moment released on the younger faults, but it was these that sustained very deep slip and high stress drop (>20 MPa). The rupture may have extended to depths of up to 60 km, suggesting that the oceanic lithosphere in the northern Wharton Basin may be cold and strong enough to sustain brittle failure at such depths. Alternatively, the rupture may have occurred with an alternative weakening mechanism, such as thermal runaway.

Journal ArticleDOI
TL;DR: Research on the local knowledge of medicinal plants by sub-ethnic Batak Simalungun of North Sumatra was conducted, using an ethnobotanical approach, and it seemed that younger generation had lost their knowledge in the medicinal plants.
Abstract: Silalahi M, Supriatna J, Walujo EB, Nisyawati. 2015. Local knowledge of medicinal plants in sub-ethnic Batak Simalungun of North Sumatra, Indonesia. Biodiversitas 16: 44-54. Research on the local knowledge of medicinal plants by sub-ethnic Batak Simalungun of North Sumatra was conducted, using an ethnobotanical approach. The sample consisted of 8 key informants and 32 general respondents, who were grouped into two, namely those who were 30-50 years old and >50 years old. Data were analyzed both qualitatively by descriptive statistics and quantitatively by calculating the index of cultural significance (ICS) and the use value (UVs).It was found that 239 species (170 genera, 70 families) of medicinal plants were used to cure 18 kinds ofnatural diseases and 2 kinds of supra natural diseases. Almost half of those plants (119 species) had leaves used as medicines. Among the diseases, gastrointestinal disorders had the highest number of medicinal plants used (72 species), followed by fever (64 species), and fractures (41 species). It seemd that younger generation had lost their knowledge in the medicinal plants because their knowledge of medicinal plants (48.19 ±8.35 species) was lower than the that of older generation (170.19 ± 18.38 species), while our key informants had the highest knowledge of medicinal plants among respondents (202.00 ± 12.32 species).

Journal ArticleDOI
TL;DR: Several species are well known for their pharmacological properties but others have been used for cancer treatment by local communities, but pharmacologically unknown, hence they are promising candidates for further investigation.


Journal ArticleDOI
TL;DR: Policy makers and growers are urged to make retention of riparian reserves in oil-palm plantations standard practice, and palm-oil purchasers are encouraged to source only palm oil from plantations that employ this practice.
Abstract: Anthropogenic land-cover change is driving biodiversity loss worldwide. At the epicenter of this crisis lies Southeast Asia, where biodiversity-rich forests are being converted to oil-palm monocultures. As demand for palm oil increases, there is an urgent need to find strategies that maintain biodiversity in plantations. Previous studies found that retaining forest patches within plantations benefited some terrestrial taxa but not others. However, no study has focused on aquatic taxa such as fishes, despite their importance to human well-being. We assessed the efficacy of forested riparian reserves in conserving freshwater fish biodiversity in oil-palm monoculture by sampling stream fish communities in an oil-palm plantation in Central Kalimantan, Indonesia. Forested riparian reserves maintained preconversion local fish species richness and functional diversity. In contrast, local and total species richness, biomass, and functional diversity declined markedly in streams without riparian reserves. Mechanistically, riparian reserves appeared to increase local species richness by increasing leaf litter cover and maintaining coarse substrate. The loss of fishes specializing in leaf litter and coarse substrate decreased functional diversity and altered community composition in oil-palm plantation streams that lacked riparian reserves. Thus, a land-sharing strategy that incorporates the retention of forested riparian reserves may maintain the ecological integrity of fish communities in oil-palm plantations. We urge policy makers and growers to make retention of riparian reserves in oil-palm plantations standard practice, and we encourage palm-oil purchasers to source only palm oil from plantations that employ this practice.

Journal ArticleDOI
TL;DR: The Balinese communities still preserve a rich ethnobotanical knowledge and several species are well known for their pharmacological properties, but some are understudied and could be promising candidates for further research.

Journal ArticleDOI
25 Mar 2015-PLOS ONE
TL;DR: This first global assessment of extinction risk for a major group of freshwater invertebrates, caridean shrimps, finds that two species are extinct with a further 10 possibly extinct, and almost one third of species are either threatened or Near Threatened (NT).
Abstract: We present the first global assessment of extinction risk for a major group of freshwater invertebrates, caridean shrimps. The risk of extinction for all 763 species was assessed using the IUCN Red List criteria that include geographic ranges, habitats, ecology and past and present threats. The Indo-Malayan region holds over half of global species diversity, with a peak in Indo-China and southern China. Shrimps primarily inhabit flowing water; however, a significant subterranean component is present, which is more threatened than the surface fauna. Two species are extinct with a further 10 possibly extinct, and almost one third of species are either threatened or Near Threatened (NT). Threats to freshwater shrimps include agricultural and urban pollution impact over two-thirds of threatened and NT species. Invasive species and climate change have the greatest overall impact of all threats (based on combined timing, scope and severity of threats).

Journal ArticleDOI
TL;DR: The current tropical amphi-Pacific disjunctions in subgenus Diplazium can be better explained by the disruption of boreotropical belt, however, long-distance dispersal between Eurasia and tropical America cannot be ruled out.
Abstract: Aim: Gondwanan vicariance, boreotropical migration and long-distance dispersal have been posited as alternative hypotheses explaining the tropical distribution patterns and diversifications in many fern groups. Here, the historical biogeography of Diplazium is reconstructed to evaluate the impact of these biogeographical processes in shaping the modern tropical disjunctions. Location: World-wide with a focus on tropical forest habitats. Methods: Divergence times were estimated by analysing nucleotide sequences of seven plastid DNA regions (atpA, atpB, matK, rbcL, rps4, rps4–trnS and trnL–F) from 123 species of Diplazium and its allied genera, using a Bayesian relaxed clock method and three fossil calibrations. The ancestral areas were reconstructed using the likelihood dispersal–extinction–cladogenesis (DEC) approach. Results: The crown group of Diplazium was estimated to have originated in Eurasia and undergone an initial diversification in the Northern Hemisphere around 41.7 Ma [95% highest posterior density (HPD): 34–49 Ma] during the Eocene. Two disjunct events between the Old and New World were identified: one in subgenus Diplazium around the Eocene–Oligocene boundary (31.2 Ma, 95% HPD: 25–38 Ma), and the other in subgenus Callipteris during the middle Miocene (12.6 Ma, 95% HPD: 15–23 Ma). Furthermore, Palaeotropical disjunctions in subgenus Callipteris are indicative of multiple dispersal events during the Miocene. Main conclusions: The evolutionary history of Diplazium involves a variety of biogeographical scenarios. Early diversification of Diplazium in the Northern Hemisphere during the Eocene corresponds with the migration from Eurasia to North America over land bridges as a member of the boreotropical flora. The current tropical amphi-Pacific disjunctions in subgenus Diplazium can be better explained by the disruption of boreotropical belt, however, long-distance dispersal between Eurasia and tropical America cannot be ruled out. Island-hopping and trans-Pacific dispersals followed by speciation characterize the disjunctions and diversifications of subgenus Callipteris during the Neogene. Gondwanan vicariance is not supported by any of our results.

Journal ArticleDOI
TL;DR: With 1172 native species, the Indonesian ichthyofauna is among the world's most speciose, but the taxonomic knowledge is still fragmentary and the fast increase of anthropogenic perturbations during the eighteen century is worrying.
Abstract: With 1172 native species, the Indonesian ichthyofauna is among the world's most speciose. Despite that the inventory of the Indonesian ichthyofauna started during the eighteen century, the numerous species descriptions during the last decades highlight that the taxonomic knowledge is still fragmentary. Meanwhile, the fast increase of anthropogenic perturbations during

Journal ArticleDOI
TL;DR: In this article, a self-consistent GPS-based earthquake catalog for the Sumatran plate boundary is presented, where the authors use continuous daily position time series from the GPS Array (SuGAr) to document 30 earthquakes which occurred within or outside the SuGAr network from August 2002 through the end of 2013, and provide estimates of both vertical and horizontal coseismic offsets associated with 1 M9.2, 3 M8, 6 M7, 19 M6, and 1 M5.9 earthquakes.
Abstract: We have compiled the first self-consistent GPS-based earthquake catalog for the Sumatran plate boundary. Using continuous daily position time series from the Sumatran GPS Array (SuGAr), we document 30 earthquakes which occurred within or outside the SuGAr network from August 2002 through the end of 2013, and we provide estimates of both vertical and horizontal coseismic offsets associated with 1 M9.2, 3 M8, 6 M7, 19 M6, and 1 M5.9 earthquakes, as well as postseismic decay amplitudes and times associated with 9 M > 7 earthquakes and 1 M6.7 earthquake. For most of the previously studied earthquakes, our geodetic catalog provides more complete coseismic displacements than those published, showing consistent patterns of motion across a large range of distances. For many of the moderate to large earthquakes, we publish their coseismic displacements for the first time, providing new constraints on their locations and slip distributions. For the postseismic time series, we have tackled the challenge of separating the signals for individual events from the overlapping effects of many other earthquakes. As a result, we have obtained either new or much longer time series than previously published. Based on our long time series, we find logarithmic decay times ranging from several days to more than 20 years, and sometimes a second decay time is needed, suggesting that when studying large to great Sumatran earthquakes, we need to consider multiple postseismic mechanisms. Our geodetic catalog provides rich spatial and temporal Sumatran earthquake cycle information for future studies of the physics and dynamics of the Sumatran plate boundary.

Journal ArticleDOI
TL;DR: In this paper, the effect of reaction temperature and time on the EFB fast pyrolysis optimization was investigated in the context of pyrolitic conversion of EFB to bio-fuels.

Journal ArticleDOI
TL;DR: In this article, the authors investigated the different strategies for high substrate loading on the simultaneous fermentation and fermentation (SSF) process of bioethanol production from EFBs and showed that the highest concentration of ethanol can be produced by a high concentration of substrate loading gradually, whereas, 20% (g.mL −1 ) concentration substrate loading by directly or gradually produce almost same ethanol concentration.

Journal ArticleDOI
TL;DR: In this paper, the authors used multibeam bathymetry and seismic reflection data to develop an understanding of catchment basins, turbidity current pathways, and depositional styles, as well as to precisely locate our gravity cores, piston cores, Kasten cores, and multicores.
Abstract: In order to investigate the possibility of a long-term paleoseismic history from offshore sedimentary records in Sumatra, we collected 144 deep-sea sediment cores in the trench and in lower slope piggyback basins of the Sumatra accretionary prism. We used multibeam bathymetry and seismic reflection data to develop an understanding of catchment basins, turbidity current pathways, and depositional styles, as well as to precisely locate our gravity cores, piston cores, Kasten cores, and multicores. We use detailed physical property data, including computed tomographic X-ray, gamma density, magnetic susceptibility, grain-size analysis, faunal analysis, and smear slides, to evaluate the turbidite stratigraphy and sedimentology at each site. We use radiocarbon age control for piggyback basin sites above the carbonate compensation depth, and use 210 Pb and 137 Cs to evaluate the timing of the most recent sedimentary deposits. Using well-log correlation methods and radiometric age control, we test for potential correlations between isolated sites in piggyback basins and the trench. We find evidence for very young surface turbidites along the northern Sumatra margin, most likely emplaced within the past few decades at the seafloor in both the 2004 and 2005 earthquake rupture zones, with no overlying hemipelagic sediment. Based on the young soupy deposits, lack of oxidation, and 210 Pb and 14 C age determinations, we interpret the uppermost turbidite in 21 cores within the 2004 rupture area to have been deposited within a few years of collection in 2007, and most likely as a result of the 2004 moment magnitude (M w ) ∼9.2 earthquake. The likely 2004 turbidite has a distinctive stacked structure of three major fining-upward sequences observed at several basin and trench sites, similar to the pattern of moment release in the 2004 earthquake. We observe rapid die out of the 2004 and 2005 deposits with distance from the slip zones, from local sources of sediment supply, and in the segment boundary between the slip zones. Many individual turbidites show strong similarities between isolated sites, as well as having similar emplacement times. Based upon radiocarbon age control and lithostratigraphic correlations between isolated basin and trench core sites, we interpret that 43 turbidites can be linked spatially over a distance of ∼230 km within the southern portion of the 2004 rupture zone. Sampling at deep-water sites isolated from terrestrial and shallow-water sediment sources, as well as potential storm or tsunami wave triggers, limits potential mechanisms for initiating turbidity currents to plate boundary, crustal, or slab earthquakes. Other potential triggers, such as tectonic oversteepening, random self-failures, gas hydrate destabilization, are unlikely to be correlative between any two isolated sites. The most probable explanation for the similarity of timing, turbidite sequences, and individual turbidite structure in isolated basin and trench stratigraphic sequences is a seismogenic origin. The mean emplacement time for turbidites (likely triggered by Great earthquakes, magnitude > ∼8) in the 2004 rupture region for the past 6.6 ± 0.14 k.y. is 160 yr for 43 turbidites. The ages of 8 of the 10 uppermost turbidite deposits, spanning the past ∼1500 yr, are largely consistent with the terrestrial paleoseismic and/or tsunami records in Thailand, Sumatra, India, and the Andaman Islands, suggesting either coincidence or a common origin. The mean interseismic time from the turbidite record for this same period is 170 yr, comparable to the ∼210 yr recurrence for regional tsunami. The turbidite record, at 180 yr (6 events), compares reasonably well to the average for all events on northern Simeulue of 220 yr, and is identical to the tsunami interval of 180 yr for the same time period (6 events). Of the 43 correlated turbidites in the 2004 earthquake region, 13 are well correlated in our cores along strike lengths of 150 km or greater, and satisfy criteria for robustness; 24 turbidites correlated along a shorter strike distance may represent other plate boundary earthquakes of shorter spatial extent and may include turbidite beds sourced from crustal and slab earthquakes.

Journal ArticleDOI
TL;DR: In this article, the performance of diesel engine simulated in 1,000-1,500rpm with 0, 10, 20, 30, 40, 50 and 60 Nm engine loads.

Journal ArticleDOI
TL;DR: The results serve as the foundation for the conservation genetics of R. mucronata and R. stylosa and highlighted the need to recognize the genetic distinctiveness of closely-related species, determine their respective genetic structure, and avoid artificially promoting hybridization in mangrove restoration programmes.
Abstract: Mangrove forests are ecologically important but globally threatened intertidal plant communities. Effective mangrove conservation requires the determination of species identity, management units, and genetic structure. Here, we investigate the genetic distinctiveness and genetic structure of an iconic but yet taxonomically confusing species complex Rhizophora mucronata and R. stylosa across their distributional range, by employing a suite of 20 informative nuclear SSR markers. Our results demonstrated the general genetic distinctiveness of R. mucronata and R. stylosa, and potential hybridization or introgression between them. We investigated the population genetics of each species without the putative hybrids, and found strong genetic structure between oceanic regions in both R. mucronata and R. stylosa. In R. mucronata, a strong divergence was detected between populations from the Indian Ocean region (Indian Ocean and Andaman Sea) and the Pacific Ocean region (Malacca Strait, South China Sea and Northwest Pacific Ocean). In R. stylosa, the genetic break was located more eastward, between populations from South and East China Sea and populations from the Southwest Pacific Ocean. The location of these genetic breaks coincided with the boundaries of oceanic currents, thus suggesting that oceanic circulation patterns might have acted as a cryptic barrier to gene flow. Our findings have important implications on the conservation of mangroves, especially relating to replanting efforts and the definition of evolutionary significant units in Rhizophora species. We outlined the genetic structure and identified geographical areas that require further investigations for both R. mucronata and R. stylosa. These results serve as the foundation for the conservation genetics of R. mucronata and R. stylosa and highlighted the need to recognize the genetic distinctiveness of closely-related species, determine their respective genetic structure, and avoid artificially promoting hybridization in mangrove restoration programmes.

Book ChapterDOI
01 Jan 2015
TL;DR: In this paper, the authors describe the dynamics of Jabodetabek starting from the early city development toward the future megacity development, which is divided into three sections comprising planning and development history; recent status of social-economic and physical-environmental situation; and future challenges that should be anticipated to achieve sustainable development.
Abstract: Jabodetabek has developed from the small and separated city regions into a larger and unified megacity. This area consists of Jakarta as the core city and its surrounding areas namely Bogor, Depok, Tangerang and Bekasi. Recently Jabodetabek has become the largest megacity in Indonesia and plays the most important role within social, economic and political aspects. However, lack of planning capacity to deal with growing complexity in managing this area should be seriously remarked. The objective of this paper is to describe the dynamics of Jabodetabek starting from the early city development toward the future megacity development. It is divided into three sections comprising planning and development history; recent status of social-economic and physical-environmental situation; and future challenges that should be anticipated to achieve sustainable development. Obviously, planning and development strategy need to be transformed into adaptive, inclusive and integrated approaches within a continues incremental process to reach the development vision.

Journal ArticleDOI
TL;DR: In this article, methanolic extracts of 18 tropical and subtropical plants were evaluated using various in vitro assays: DPPH radical scavenging activity, H 2 O 2 radical scavengence activity, β-carotene bleaching assay, and reducing power assay.
Abstract: The methanolic extracts of 18 tropical and subtropical plants were evaluated using various in vitro assays: DPPH radical scavenging activity, H 2 O 2 radical scavenging activity, β-carotene bleaching assay, and reducing power assay. Total phenol content measurements of several tropical and subtropical plants were determinedby Folin-Ciocalteau reagent equivalent to gallic acid and quercetin. The α-glucosidase inhibitory assay was conducted against α-glucosidase from Saccharomycescerevisiae . The inhibitory mechanisms of the active compounds were analyzed using Lineweaver-Burk plots. The plantextracts were obtained by the maceration method using methanol as the solvent. A significant and linear correlation coefficient between the antioxidant activity and the total phenolic content was found in the methanol extracts. The result revealed that the subtropical plants Quercusgilva Blume and Quercusphillyraeoides A. Grey had the highest antioxidant activities (IC 50 ) with 38.53±3.10 and 25.00±1.43 μg/mL, respectively, while Mallotusjaponicus and Quercusphillyraeoides A. Grey had the highest α-glucosidase inhibitory activities (IC 50 ) with 8.46±0.30 and 9.88±0.36 μg/mL, respectively. Thus, these plants could potentially be rich sources of natural antioxidants and anti-diabetes medicine.

Journal ArticleDOI
TL;DR: In this article, a model of service quality of public land transport services, namely P-TRANSQUAL, was tested, which consists of four dimensions, which are comfort, tangible, personnel, and reliability.
Abstract: Purpose – The purpose of this paper is to test a model of service quality of public land transport services, especially paratransit services. Design/methodology/approach – This study used quantitative approach. Data were collected through a survey method using questionnaire. The respondents of the study are 880 passengers of paratransit services in Indonesia. Exploratory factor analysis and confirmatory factor analysis were performed in order to identify the dimensions of service quality and test the convergent and discriminant validity of the dimensions. Cronbach’s α analysis was carried out to test the reliability of the dimensions. In addition, criterion-based validity and the stability of the service quality model were also tested. Findings – A model of service quality of public land transport, namely P-TRANSQUAL, was tested. P-TRANSQUAL consists of four dimensions, which are comfort, tangible, personnel, and reliability. The model has been proven to have good validity, reliability, and stability for ...