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Eric Venner
Researcher at Baylor College of Medicine
Publications - 46
Citations - 1927
Eric Venner is an academic researcher from Baylor College of Medicine. The author has contributed to research in topics: Medicine & Biology. The author has an hindex of 15, co-authored 33 publications receiving 1214 citations. Previous affiliations of Eric Venner include Human Genome Sequencing Center.
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Journal ArticleDOI
A large-scale evaluation of computational protein function prediction
Predrag Radivojac,Wyatt T. Clark,Tal Ronnen Oron,Alexandra M. Schnoes,Tobias Wittkop,Artem Sokolov,Artem Sokolov,Kiley Graim,Christopher S. Funk,Karin Verspoor,Asa Ben-Hur,Gaurav Pandey,Gaurav Pandey,Jeffrey M. Yunes,Ameet Talwalkar,Susanna Repo,Susanna Repo,Michael L Souza,Damiano Piovesan,Rita Casadio,Zheng Wang,Jianlin Cheng,Hai Fang,Julian Gough,Patrik Koskinen,Petri Törönen,Jussi Nokso-Koivisto,Liisa Holm,Domenico Cozzetto,Daniel W. A. Buchan,Kevin Bryson,David T. Jones,Bhakti Limaye,Harshal Inamdar,Avik Datta,Sunitha K Manjari,Rajendra Joshi,Meghana Chitale,Daisuke Kihara,Andreas Martin Lisewski,Serkan Erdin,Eric Venner,Olivier Lichtarge,Robert Rentzsch,Haixuan Yang,Alfonso E. Romero,Prajwal Bhat,Alberto Paccanaro,Tobias Hamp,Rebecca Kaßner,Stefan Seemayer,Esmeralda Vicedo,Christian Schaefer,Dominik Achten,Florian Auer,Ariane Boehm,Tatjana Braun,Maximilian Hecht,Mark Heron,Peter Hönigschmid,Thomas A. Hopf,Stefanie Kaufmann,Michael Kiening,Denis Krompass,Cedric Landerer,Yannick Mahlich,Manfred Roos,Jari Björne,Tapio Salakoski,Andrew Wong,Hagit Shatkay,Hagit Shatkay,Fanny Gatzmann,Ingolf Sommer,Mark N. Wass,Michael J.E. Sternberg,Nives Škunca,Fran Supek,Matko Bošnjak,Panče Panov,Sašo Džeroski,Tomislav Šmuc,Yiannis A. I. Kourmpetis,Yiannis A. I. Kourmpetis,Aalt D. J. van Dijk,Cajo J. F. ter Braak,Yuanpeng Zhou,Qingtian Gong,Xinran Dong,Weidong Tian,Marco Falda,Paolo Fontana,Enrico Lavezzo,Barbara Di Camillo,Stefano Toppo,Liang Lan,Nemanja Djuric,Yuhong Guo,Slobodan Vucetic,Amos Marc Bairoch,Amos Marc Bairoch,Michal Linial,Patricia C. Babbitt,Steven E. Brenner,Christine A. Orengo,Burkhard Rost,Sean D. Mooney,Iddo Friedberg +107 more
TL;DR: Today's best protein function prediction algorithms substantially outperform widely used first-generation methods, with large gains on all types of targets, and there is considerable need for improvement of currently available tools.
Journal ArticleDOI
Improving reporting standards for polygenic scores in risk prediction studies
Hannah Wand,Samuel A. Lambert,Cecelia P. Tamburro,Michael A. Iacocca,Jack W. O’Sullivan,Catherine Sillari,Iftikhar J. Kullo,Robb Rowley,Jacqueline S. Dron,Jacqueline S. Dron,Deanna Brockman,Eric Venner,Mark I McCarthy,Mark I McCarthy,Antonis C. Antoniou,Douglas F. Easton,Robert A. Hegele,Amit Khera,Nilanjan Chatterjee,Charles Kooperberg,Karen Edwards,Katherine Vlessis,Kim Kinnear,John Danesh,John Danesh,Helen Parkinson,Helen Parkinson,Erin M. Ramos,Megan C. Roberts,Kelly E. Ormond,Muin J. Khoury,A. Cecile J.W. Janssens,Katrina A.B. Goddard,Peter Kraft,Jacqueline Al MacArthur,Michael Inouye,Genevieve L. Wojcik +36 more
TL;DR: The Polygenic Risk Score Reporting Standards (PRS-RS) as discussed by the authors is a comprehensive reporting framework that defines the minimal information that is needed to interpret and evaluate PRSs, especially with respect to downstream clinical applications.
Posted ContentDOI
Improving reporting standards for polygenic scores in risk prediction studies
Hannah Wand,Samuel A. Lambert,Cecelia P. Tamburro,Michael A. Iacocca,Jack W. O’Sullivan,Catherine Sillari,Iftikhar J. Kullo,Robb Rowley,Jacqueline S. Dron,Jacqueline S. Dron,Deanna Brockman,Eric Venner,Mark I McCarthy,Antonis C. Antoniou,Douglas F. Easton,Robert A. Hegele,Amit Khera,Nilanjan Chatterjee,Charles Kooperberg,Karen Edwards,Katherine Vlessis,Kim Kinnear,John Danesh,Helen Parkinson,Erin M. Ramos,Megan C. Roberts,Kelly E. Ormond,Muin J. Khoury,A. Cecile J.W. Janssens,Katrina A.B. Goddard,Peter Kraft,Jacqueline Al MacArthur,Michael Inouye,Genevieve L. Wojcik +33 more
TL;DR: A novel PRS Reporting Statement is developed, updating previous standards to the current state of the field, and emphasis has been placed on data availability and transparency to facilitate reproducibility and benchmarking against other PRS, such as deposition in the publicly available PGS Catalog.
Journal ArticleDOI
Novel Genetic Triggers and Genotype–Phenotype Correlations in Patients With Left Ventricular Noncompaction
Karol Miszalski-Jamka,John L. Jefferies,Wojciech Mazur,Jan Głowacki,Jianhong Hu,Monika Lazar,Richard A. Gibbs,Jacek Liczko,Jan Kłyś,Eric Venner,Donna M. Muzny,Jarosław Rycaj,Jacek Białkowski,Ewa Kluczewska,Zbigniew Kalarus,Shalini N. Jhangiani,Hussein R. Al-Khalidi,Tomasz Kukulski,James R. Lupski,William J. Craigen,Matthew N. Bainbridge +20 more
TL;DR: LVHT and LVNC likely represent a continuum of genotypic disease with differences in severity and variable phenotype explained, in part, by the number of VOIs and whether mutations are present in sarcomeric or nonsarcomeric genes.
Journal ArticleDOI
Harmonizing Clinical Sequencing And Interpretation For The Emerge III Network
Hana Zouk,Eric Venner,Niall J. Lennon,Donna M. Muzny,Debra J. Abrams,Samuel E. Adunyah,Ladia Albertson-Junkans,Darren C. Ames,Paul S. Appelbaum,Samuel J. Aronson,Sharon Aufox,Lawrence J. Babb,Adithya Balasubramanian,Hana Bangash,Melissa A. Basford,Lisa Bastarache,Samantha Baxter,Meckenzie A. Behr,Barbara Benoit,Elizabeth J. Bhoj,Suzette J. Bielinski,Sarah T. Bland,Carrie L. Blout,Kenneth M. Borthwick,Erwin P. Bottinger,Mark Bowser,Harrison Brand,Murray H. Brilliant,Wendy Brodeur,Pedro J. Caraballo,David Carrell,Andrew Carroll,Berta Almoguera,Lisa M. Castillo,Victor Castro,Gauthami Chandanavelli,Theodore Chiang,Rex L. Chisholm,Kurt D. Christensen,Wendy K. Chung,Christopher G. Chute,Brittany City,Beth L. Cobb,John J. Connolly,Paul K. Crane,Katherine D. Crew,David R. Crosslin,Mariza de Andrade,Jessica De la Cruz,Shawn Denson,Josh C. Denny,Tim DeSmet,Ozan Dikilitas,Christopher A. Friedrich,Stephanie M. Fullerton,Birgit Funke,Stacey Gabriel,Vivian S. Gainer,Ali G. Gharavi,Andrew M. Glazer,Joseph T. Glessner,Jessica Goehringer,Adam S. Gordon,Chet Graham,Robert C. Green,Justin H. Gundelach,Jyoti G. Dayal,Heather S. Hain,Hakon Hakonarson,Maegan V. Harden,John B. Harley,Margaret Harr,Andrea L. Hartzler,M. Geoffrey Hayes,Scott J. Hebbring,Nora B. Henrikson,Andrew Hershey,Christin Hoell,Ingrid A. Holm,Kayla Marie Howell,George Hripcsak,Jianhong Hu,Gail P. Jarvik,Joy Jayaseelan,Yunyun Jiang,Yoonjung Yoonie Joo,Sheethal Jose,Navya Shilpa Josyula,Anne E. Justice,Sara E. Kalla,Divya Kalra,Elizabeth W. Karlson,Melissa A. Kelly,Brendan J. Keating,Eimear E. Kenny,Dustin Key,Krzysztof Kiryluk,Terrie Kitchner,Barbara J. Klanderman,Eric W. Klee,David C. Kochan,Viktoriya Korchina,Leah C. Kottyan,Christie Kovar,Emily Kudalkar,Iftikhar J. Kullo,Philip E. Lammers,Eric B. Larson,Matthew S. Lebo,Magalie S. Leduc,Ming Ta (Michael) Lee,Kathleen A. Leppig,Nancy D. Leslie,Rongling Li,Wayne H. Liang,Chiao-Feng Lin,Jodell E. Linder,Noralane M. Lindor,Todd Lingren,James G. Linneman,Cong Liu,Wen Liu,Xiuping Liu,John Lynch,Hayley Lyon,Alyssa Macbeth,Harshad Mahadeshwar,Lisa Mahanta,Brad Malin,Teri A. Manolio,Maddalena Marasa,Keith Marsolo,Michael J. Dinsmore,Sheila Dodge,Elizabeth Hynes,Phil Dunlea,Todd L. Edwards,Christine M. Eng,David Fasel,Alex Fedotov,QiPing Feng,Mark Fleharty,Andrea Foster,Robert R. Freimuth,Michelle L. McGowan,Elizabeth M. McNally,James Meldrim,Frank D. Mentch,Jonathan D. Mosley,Shubhabrata Mukherjee,Thomas E. Mullen,Jesse Muniz,David R. Murdock,Shawn N. Murphy,Mullai Murugan,Melanie F. Myers,Bahram Namjou,Yizhao Ni,Aniwaa Owusu Obeng,Robert C. Onofrio,Casey Overby Taylor,Thomas N. Person,Josh F. Peterson,Lynn Petukhova,Cassandra J. Pisieczko,Siddharth Pratap,Cynthia A. Prows,Megan J. Puckelwartz,Alanna Kulchak Rahm,Ritika Raj,James D. Ralston,Arvind Ramaprasan,Andrea H. Ramirez,Luke V. Rasmussen,Laura J. Rasmussen-Torvik,Hila Milo Rasouly,Soumya Raychaudhuri,Marylyn D. Ritchie,Catherine M. Rives,Beenish Riza,Dan M. Roden,Elisabeth A. Rosenthal,Avni Santani,Dan Schaid,Steven E. Scherer,Stuart A. Scott,Aaron Scrol,Soumitra Sengupta,Ning Shang,Himanshu Sharma,Richard R. Sharp,Rajbir Singh,Patrick M. A. Sleiman,Kara Slowik,Joshua C. Smith,Maureen E. Smith,Jordan W. Smoller,Sunghwan Sohn,Ian B. Stanaway,Justin Starren,Mary Stroud,Jessica Su,Kasia Tolwinski,Sara L. Van Driest,Sean M. Vargas,Matthew Varugheese,David L. Veenstra,Miguel Verbitsky,Gina Vicente,Michael Wagner,Kimberly Walker,Theresa L. Walunas,Liwen Wang,Qiaoyan Wang,Wei-Qi Wei,Scott T. Weiss,Georgia L. Wiesner,Quinn S. Wells,Chunhua Weng,Peter White,Ken Wiley,Janet L. Williams,Marc S. Williams,Michael W. Wilson,Leora Witkowski,Laura Allison Woods,Betty Woolf,Tsung-Jung Wu,Julia Wynn,Yaping Yang,Victoria Yi,Ge Zhang,Lan Zhang,Heidi L. Rehm,Richard A. Gibbs +234 more
TL;DR: This study accomplished integration of structured genomic results into multiple electronic health record (EHR) systems, setting the stage for clinical decision support to enable genomic medicine.