R
René De Mot
Researcher at Katholieke Universiteit Leuven
Publications - 114
Citations - 5429
René De Mot is an academic researcher from Katholieke Universiteit Leuven. The author has contributed to research in topics: Bacteriocin & Pseudomonas. The author has an hindex of 32, co-authored 109 publications receiving 4679 citations.
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Journal ArticleDOI
Minimum Information about a Biosynthetic Gene cluster.
Marnix H. Medema,Marnix H. Medema,Renzo Kottmann,Pelin Yilmaz,Matthew Cummings,John B. Biggins,Kai Blin,Irene de Bruijn,Yit-Heng Chooi,Yit-Heng Chooi,Jan Claesen,R. Cameron Coates,Pablo Cruz-Morales,Srikanth Duddela,Stephanie Düsterhus,Daniel J. Edwards,David P. Fewer,Neha Garg,Christoph Geiger,Juan Pablo Gomez-Escribano,Anja Greule,Michalis Hadjithomas,Anthony S. Haines,Eric J. N. Helfrich,Matthew L. Hillwig,Keishi Ishida,Adam C. Jones,Carla S. Jones,Katrin Jungmann,Carsten Kegler,Hyun Uk Kim,Hyun Uk Kim,Peter Kötter,Daniel Krug,Joleen Masschelein,Alexey V. Melnik,Simone M. Mantovani,Emily A. Monroe,Marcus A. Moore,Nathan A. Moss,Hans-Wilhelm Nützmann,Guohui Pan,Amrita Pati,Daniel Petras,F. Jerry Reen,Federico Rosconi,Zhe Rui,Zhenhua Tian,Nicholas J. Tobias,Yuta Tsunematsu,Yuta Tsunematsu,Philipp Wiemann,Elizabeth E. Wyckoff,Xiaohui Yan,Grace Yim,Fengan Yu,Yunchang Xie,Bertrand Aigle,Alexander Kristian Apel,Carl J. Balibar,Emily P. Balskus,Francisco Barona-Gómez,Andreas Bechthold,Helge B. Bode,Rainer Borriss,Sean F. Brady,Axel A. Brakhage,Patrick Caffrey,Yi-Qiang Cheng,Jon Clardy,Russell J. Cox,Russell J. Cox,René De Mot,Stefano Donadio,Mohamed S. Donia,Wilfred A. van der Donk,Wilfred A. van der Donk,Pieter C. Dorrestein,Sean Doyle,Arnold J. M. Driessen,Monika Ehling-Schulz,K. D. Entian,Michael A. Fischbach,Lena Gerwick,William H. Gerwick,Harald Gross,Bertolt Gust,Christian Hertweck,Christian Hertweck,Monica Höfte,Susan E. Jensen,Jianhua Ju,Leonard Katz,Leonard Kaysser,Jonathan L. Klassen,Nancy P. Keller,Jan Kormanec,Oscar P. Kuipers,Tomohisa Kuzuyama,Nikos C. Kyrpides,Nikos C. Kyrpides,Hyung Jin Kwon,Sylvie Lautru,Rob Lavigne,Chia Y. Lee,Bai Linquan,Xinyu Liu,Wen Liu,Andriy Luzhetskyy,Taifo Mahmud,Yvonne Mast,Carmen Méndez,Mikko Metsä-Ketelä,Jason Micklefield,Douglas A. Mitchell,Bradley S. Moore,Leonilde M. Moreira,Rolf Müller,Brett A. Neilan,Markus Nett,Jens Nielsen,Jens Nielsen,Fergal O'Gara,Fergal O'Gara,Hideaki Oikawa,Anne Osbourn,Marcia S. Osburne,Bohdan Ostash,Shelley M. Payne,Jean-Luc Pernodet,Miroslav Petricek,Jörn Piel,Olivier Ploux,Jos M. Raaijmakers,José A. Salas,Esther K. Schmitt,Barry Scott,Ryan F. Seipke,Ben Shen,David H. Sherman,Kaarina Sivonen,Michael J. Smanski,Margherita Sosio,Evi Stegmann,Roderich D. Süssmuth,Kapil Tahlan,Christopher M. Thomas,Yi Tang,Andrew W. Truman,Muriel Viaud,Jonathan D. Walton,Christopher T. Walsh,Tilmann Weber,Gilles P. van Wezel,Barrie Wilkinson,Joanne M. Willey,Wolfgang Wohlleben,Gerard D. Wright,Nadine Ziemert,Changsheng Zhang,Sergey B. Zotchev,Rainer Breitling,Eriko Takano,Frank Oliver Glöckner,Frank Oliver Glöckner +164 more
TL;DR: This work proposes the Minimum Information about a Biosynthetic Gene cluster (MIBiG) data standard, to facilitate consistent and systematic deposition and retrieval of data on biosynthetic gene clusters.
Journal ArticleDOI
Flagella-driven chemotaxis towards exudate components is an important trait for tomato root colonization by Pseudomonas fluorescens.
Sandra de Weert,Hans Vermeiren,Ine H. M. Mulders,Irene Kuiper,Nico Hendrickx,Guido V. Bloemberg,Jos Vanderleyden,René De Mot,Ben J. J. Lugtenberg +8 more
TL;DR: Experiments show that chemotaxis is an important competitive colonization trait for competitive tomato root-tip colonization by Pseudomonas fluorescens and suggested that malic acid and citric acid are among major chemo-attractants for P. fluorescenceens WCS365 cells in the tomato rhizosphere.
Journal ArticleDOI
The C‐terminal sequence conservation between OmpA‐related outer membrane proteins and MotB suggests a common function in both Gram‐positive and Gram‐negative bacteria, possibly in the interaction of these domains with peptidoglycan
René De Mot,Jozef Vanderleyden +1 more
TL;DR: The major outer membrane protein OprF from Pseudomonas species displays strong homology to several outer membrane proteins from unrelated species, including OmpA from enteric bacteria, and the extended C-terminal homology is also found in lipoproteins that are tightly, but non-covalently bound to peptidogiycan.
Journal ArticleDOI
MS/MS networking guided analysis of molecule and gene cluster families
Don D. Nguyen,Cheng-Hsuan Wu,Wilna J. Moree,Anne Lamsa,Marnix H. Medema,X. Zhao,Ronnie G. Gavilan,Marystella Aparicio,Librada A. Atencio,Chanaye Jackson,Javier Ballesteros,Joel Sanchez,Jeramie D. Watrous,Vanessa V. Phelan,Corine van de Wiel,Roland D. Kersten,Samina Mehnaz,René De Mot,Elizabeth A. Shank,Pep Charusanti,Harish Nagarajan,Brendan M. Duggan,Bradley S. Moore,Nuno Bandeira,Bernhard O. Palsson,Kit Pogliano,Marcelino Gutiérrez,Pieter C. Dorrestein +27 more
TL;DR: This paper matched the molecular families of peptide natural products produced by 42 bacilli and 18 pseudomonads through the generation of amino acid sequence tags from MS/MS data of specific clusters found in the MS/ MS network, providing the ability to link particular molecules with the genes that produced them.
Journal ArticleDOI
Ribosomally encoded antibacterial proteins and peptides from Pseudomonas
TL;DR: A genomic perspective on pseudomonad bacteriocinogeny shows that the modular architecture of S pyocins of P. aeruginosa is retained in a large diversified group of bacteriOCins, most of which target DNA or RNA.