Showing papers by "University of Antananarivo published in 2018"

Clonal genome evolution and rapid invasive spread of the marbled crayfish

Abstract: The marbled crayfish Procambarus virginalis is a unique freshwater crayfish characterized by very recent speciation and parthenogenetic reproduction. Marbled crayfish also represent an emerging invasive species and have formed wild populations in diverse freshwater habitats. However, our understanding of marbled crayfish biology, evolution and invasive spread has been hampered by the lack of freshwater crayfish genome sequences. We have now established a de novo draft assembly of the marbled crayfish genome. We determined the genome size at approximately 3.5 gigabase pairs and identified >21,000 genes. Further analysis confirmed the close relationship to the genome of the slough crayfish, Procambarus fallax, and also established a triploid AA’B genotype with a high level of heterozygosity. Systematic fieldwork and genotyping demonstrated the rapid expansion of marbled crayfish on Madagascar and established the marbled crayfish as a potent invader of freshwater ecosystems. Furthermore, comparative whole-genome sequencing demonstrated the clonality of the population and their genetic identity with the oldest known stock from the German aquarium trade. Our study closes an important gap in the phylogenetic analysis of animal genomes and uncovers the unique evolutionary history of an emerging invasive species.

Primates in peril: the significance of Brazil, Madagascar, Indonesia and the Democratic Republic of the Congo for global primate conservation

Abstract: Primates occur in 90 countries, but four-Brazil, Madagascar, Indonesia, and the Democratic Republic of the Congo (DRC)-harbor 65% of the world's primate species (439) and 60% of these primates are Threatened, Endangered, or Critically Endangered (IUCN Red List of Threatened Species 2017-3). Considering their importance for global primate conservation, we examine the anthropogenic pressures each country is facing that place their primate populations at risk. Habitat loss and fragmentation are main threats to primates in Brazil, Madagascar, and Indonesia. However, in DRC hunting for the commercial bushmeat trade is the primary threat. Encroachment on primate habitats driven by local and global market demands for food and non-food commodities hunting, illegal trade, the proliferation of invasive species, and human and domestic-animal borne infectious diseases cause habitat loss, population declines, and extirpation. Modeling agricultural expansion in the 21st century for the four countries under a worst-case-scenario, showed a primate range contraction of 78% for Brazil, 72% for Indonesia, 62% for Madagascar, and 32% for DRC. These pressures unfold in the context of expanding human populations with low levels of development. Weak governance across these four countries may limit effective primate conservation planning. We examine landscape and local approaches to effective primate conservation policies and assess the distribution of protected areas and primates in each country. Primates in Brazil and Madagascar have 38% of their range inside protected areas, 17% in Indonesia and 14% in DRC, suggesting that the great majority of primate populations remain vulnerable. We list the key challenges faced by the four countries to avert primate extinctions now and in the future. In the short term, effective law enforcement to stop illegal hunting and illegal forest destruction is absolutely key. Long-term success can only be achieved by focusing local and global public awareness, and actively engaging with international organizations, multinational businesses and consumer nations to reduce unsustainable demands on the environment. Finally, the four primate range countries need to ensure that integrated, sustainable land-use planning for economic development includes the maintenance of biodiversity and intact, functional natural ecosystems.

The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa.

Abstract: There is paucity of data regarding the geographical distribution, incidence, and phylogenetics of multi-drug resistant (MDR) Salmonella Typhi in sub-Saharan Africa. Here we present a phylogenetic reconstruction of whole genome sequenced 249 contemporaneous S. Typhi isolated between 2008-2015 in 11 sub-Saharan African countries, in context of the 2,057 global S. Typhi genomic framework. Despite the broad genetic diversity, the majority of organisms (225/249; 90%) belong to only three genotypes, 4.3.1 (H58) (99/249; 40%), 3.1.1 (97/249; 39%), and 2.3.2 (29/249; 12%). Genotypes 4.3.1 and 3.1.1 are confined within East and West Africa, respectively. MDR phenotype is found in over 50% of organisms restricted within these dominant genotypes. High incidences of MDR S. Typhi are calculated in locations with a high burden of typhoid, specifically in children aged <15 years. Antimicrobial stewardship, MDR surveillance, and the introduction of typhoid conjugate vaccines will be critical for the control of MDR typhoid in Africa.

Early Holocene human presence in Madagascar evidenced by exploitation of avian megafauna

Abstract: Previous research suggests that people first arrived on Madagascar by ~2500 years before present (years B.P.). This hypothesis is consistent with butchery marks on extinct lemur bones from ~2400 years B.P. and perhaps with archaeological evidence of human presence from ~4000 years B.P. We report >10,500-year-old human-modified bones for the extinct elephant birds Aepyornis and Mullerornis, which show perimortem chop marks, cut marks, and depression fractures consistent with immobilization and dismemberment. Our evidence for anthropogenic perimortem modification of directly dated bones represents the earliest indication of humans in Madagascar, predating all other archaeological and genetic evidence by >6000 years and changing our understanding of the history of human colonization of Madagascar. This revision of Madagascar’s prehistory suggests prolonged human-faunal coexistence with limited biodiversity loss.

Prodigiosin, Violacein, and Volatile Organic Compounds Produced by Widespread Cutaneous Bacteria of Amphibians Can Inhibit Two Batrachochytrium Fungal Pathogens.

Abstract: Symbiotic bacteria can produce secondary metabolites and volatile compounds that contribute to amphibian skin defense. Some of these symbionts have been used as probiotics to treat or prevent the emerging disease chytridiomycosis. We examined 20 amphibian cutaneous bacteria for the production of prodigiosin or violacein, brightly colored defense compounds that pigment the bacteria and have characteristic spectroscopic properties making them readily detectable, and evaluated the antifungal activity of these compounds. We detected violacein from all six isolates of Janthinobacterium lividum on frogs from the USA, Switzerland, and on captive frogs originally from Panama. We detected prodigiosin from five isolates of Serratia plymuthica or S. marcescens, but not from four isolates of S. fonticola or S. liquefaciens. All J. lividum isolates produced violacein when visibly purple, while prodigiosin was only detected on visibly red Serratia isolates. When applied to cultures of chytrid fungi Batrachochytrium dendrobatidis (Bd) and B. salamandrivorans (Bsal), prodigiosin caused significant growth inhibition, with minimal inhibitory concentrations (MIC) of 10 and 50 μM, respectively. Violacein showed a MIC of 15 μM against both fungi and was slightly more active against Bsal than Bd at lower concentrations. Although neither violacein nor prodigiosin showed aerosol activity and is not considered a volatile organic compound (VOC), J. lividum and several Serratia isolates did produce antifungal VOCs. White Serratia isolates with undetectable prodigiosin levels could still inhibit Bd growth indicating additional antifungal compounds in their chemical arsenals. Similarly, J. lividum can produce antifungal compounds such as indole-3-carboxaldehyde in addition to violacein, and isolates are not always purple, or turn purple under certain growth conditions. When Serratia isolates were grown in the presence of cell-free supernatant (CFS) from the fungi, CFS from Bd inhibited growth of the prodigiosin-producing isolates, perhaps indicative of an evolutionary arms race; Bsal CFS did not inhibit bacterial growth. In contrast, growth of one J. lividum isolate was facilitated by CFS from both fungi. Isolates that grow and continue to produce antifungal compounds in the presence of pathogens may represent promising probiotics for amphibians infected or at risk of chytridiomycosis. In a global analysis, 89% of tested Serratia isolates and 82% of J. lividum isolates were capable of inhibiting Bd and these have been reported from anurans and caudates from five continents, indicating their widespread distribution and potential for host benefit.

The Use of Vanilla Plantations by Lemurs: Encouraging Findings for both Lemur Conservation and Sustainable Agroforestry in the Sava Region, Northeast Madagascar

Abstract: Extensive areas of forest are cleared every year to establish new agricultural land in the tropics, resulting in a catastrophic loss in habitat for the world’s primates. A prominent example of this process is Madagascar, where an increasing demand for arable land has led to the once-forested landscape to be now dominated by agricultural areas used for the cultivation of food and cash crops. Despite the prominence of these plantations throughout Madagascar, their suitability as a habitat to support endemic lemur populations remains unclear. Here, we assessed lemur presence in vanilla plantations, Madagascar’s principal export crop, within the northeastern Sava region with the use of line transects. We confirmed the presence of five lemur species, four of which were nocturnal cheirogaleids, in these vanilla plantations. Intensively farmed vanilla plantations and those in existing stands of vegetation supported at least one species of lemur. Furthermore, lemurs were significantly more likely to be present in plantations grown close or adjacent to natural forest fragments, compared to more intensively farmed, anthropogenic sites. In comparison, we observed eight lemur species in natural forest fragment sites in close proximity to the vanilla plantation sites, four of which we did not observe in any of the plantation sites. Our results provide evidence of lemurs using vanilla plantations and show that vanilla plantations may act as extensions of suitable habitat for lemurs, suggesting that they may also function as matrices between isolated forest fragments through which gene flow can occur. These are important and encouraging findings for both lemur conservation and for sustainable agroforestry undertaken by local farming communities.

Who bears the cost of forest conservation

Abstract: Background While the importance of conserving ecosystems for sustainable development is widely recognized, it is increasingly evident that despite delivering global benefits, conservation often comes at local cost. Protected areas funded by multilateral lenders have explicit commitments to ensure that those negatively affected are adequately compensated. We make the first comparison of the magnitude and distribution of the local costs of a protected area with the magnitude and distribution of the compensation provided under the World Bank social safeguard policies (Performance Standard 5). Methods In the Ankeniheny-Zahamena Corridor (a new protected area and REDD+ pilot project in eastern Madagascar), we used choice experiments to estimate local opportunity costs (n = 453) which we annualized using a range of conservative assumptions concerning discount rates. Detailed surveys covering farm inputs and outputs as well as off-farm income (n = 102) allowed us to explore these opportunity costs as a proportion of local incomes. Intensive review of publically available documents provided estimates of the number of households that received safeguard compensation and the amount spent per household. We carried out a contingent valuation exercise with beneficiaries of this compensation two years after the micro-development projects were implemented (n = 62) to estimate their value as perceived by beneficiaries. Results Conservation restrictions result in very significant costs to forest communities. The median net present value of the opportunity cost across households in all sites was US$2,375. When annualized, these costs represent 27–84% of total annual income for median-income households; significantly higher proportionally for poorer households. Although some households have received compensation, we conservatively estimate that more than 50% of eligible households (3,020 households) have not. Given the magnitude of compensation (based both on amount spent and valuation by recipients two years after the compensation was distributed) relative to costs, we argue that no one was fully compensated. Achieving full compensation will require an order of magnitude more than was spent but we suggest that this should be affordable given the global value of forest conservation. Discussion By analyzing in unprecedented depth both the local costs of conservation, and the compensation distributed under donor policies, we demonstrate that despite well-intentioned policies, some of the poorest people on the planet are still bearing the cost of forest conservation. Unless significant extra funding is provided by the global beneficiaries of conservation, donors’ social safeguarding requirements will not be met, and forest conservation in developing countries will jeopardize, rather than contribute to, sustainable development goals.

Spatio-temporal mapping of Madagascar's Malaria Indicator Survey results to assess Plasmodium falciparum endemicity trends between 2011 and 2016.

Abstract: Reliable measures of disease burden over time are necessary to evaluate the impact of interventions and assess sub-national trends in the distribution of infection. Three Malaria Indicator Surveys (MISs) have been conducted in Madagascar since 2011. They provide a valuable resource to assess changes in burden that is complementary to the country’s routine case reporting system. A Bayesian geostatistical spatio-temporal model was developed in an integrated nested Laplace approximation framework to map the prevalence of Plasmodium falciparum malaria infection among children from 6 to 59 months in age across Madagascar for 2011, 2013 and 2016 based on the MIS datasets. The model was informed by a suite of environmental and socio-demographic covariates known to influence infection prevalence. Spatio-temporal trends were quantified across the country. Despite a relatively small decrease between 2013 and 2016, the prevalence of malaria infection has increased substantially in all areas of Madagascar since 2011. In 2011, almost half (42.3%) of the country’s population lived in areas of very low malaria risk ( 20%) increased from only 2.2% in 2011 to 9.2% in 2016. A comparison of the model-based estimates with the raw MIS results indicates there was an underestimation of the situation in 2016, since the raw figures likely associated with survey timings were delayed until after the peak transmission season. Malaria remains an important health problem in Madagascar. The monthly and annual prevalence maps developed here provide a way to evaluate the magnitude of change over time, taking into account variability in survey input data. These methods can contribute to monitoring sub-national trends of malaria prevalence in Madagascar as the country aims for geographically progressive elimination.

Cornus mas (L.) Fruit as a Potential Source of Natural Health-Promoting Compounds: Physico-Chemical Characterisation of Bioactive Components.

Abstract: Interest in new sources of anti-inflammatory and antioxidant compounds has recently become a major research issue, with the cornelian cherry (Cornus mas L.) receiving particular attention for its significant amounts of phenolic compounds and vitamins, which exhibit a wide range of biological and pharmacological properties. This study was aimed at increasing knowledge regarding the cornelian cherry in Italy through the analysis of biologically active substances in the locally available genotype "Chieri". Spectrophotometric methods were applied to evaluate antioxidant activity, total anthocyanin content and total polyphenolic content. Identification and quantification of the main phytochemical compounds (polyphenols, monoterpenes, organic acids and vitamin C) was performed via high performance liquid chromatography coupled to a diode array detector. C. mas extracts showed high levels of total soluble solids and low acidity. High amounts of phenolic secondary metabolites were observed, with particular reference to anthocyanins (134.71 mgC3G/100 gFW), which confer remarkable nutraceutical properties to the analysed samples. These results highlight the potential of C. mas fruits as a good source of natural antioxidants, suggesting their use as a functional food. Future studies should focus on identifying other specific phytochemical compounds and the genetic traits of local varieties in order to improve cornelian cherry cultivars for food and medicine production.

Strong selection during the last millennium for African ancestry in the admixed population of Madagascar

Abstract: While admixed populations offer a unique opportunity to detect selection, the admixture in most of the studied populations occurred too recently to produce conclusive signals. By contrast, Malagasy populations originate from admixture between Asian and African populations that occurred ~27 generations ago, providing power to detect selection. We analyze local ancestry across the genomes of 700 Malagasy and identify a strong signal of recent positive selection, with an estimated selection coefficient >0.2. The selection is for African ancestry and affects 25% of chromosome 1, including the Duffy blood group gene. The null allele at this gene provides resistance to Plasmodium vivax malaria, and previous studies have suggested positive selection for this allele in the Malagasy population. This selection event also influences numerous other genes implicated in immunity, cardiovascular diseases, and asthma and decreases the Asian ancestry genome-wide by 10%, illustrating the role played by selection in recent human history.

Fruit scent as an evolved signal to primate seed dispersal.

Abstract: The tremendous diversity of floral and fruit traits is, to a large extent, a set of adaptations that promote plant reproduction through animal pollinators and seed dispersers. Yet, it is still unknown whether fruit scent is a by-product of fruit maturation or an evolved communication channel with animal mutualists. We show that in species that specialize on seed dispersal by lemurs—an olfactorily oriented primate—fruits increase scent production and change their chemical composition significantly more than sympatric species whose seeds are largely dispersed by birds. We further show that lemurs use these shifts in fruit scent to identify ripe fruits. These results show that fruit scent is an evolved communication system that facilitates animal-plant mutualism.

New evidence of megafaunal bone damage indicates late colonization of Madagascar

Abstract: The estimated period in which human colonization of Madagascar began has expanded recently to 5000-1000 y B.P., six times its range in 1990, prompting revised thinking about early migration sources, routes, maritime capability and environmental changes. Cited evidence of colonization age includes anthropogenic palaeoecological data 2500-2000 y B.P., megafaunal butchery marks 4200-1900 y B.P. and OSL dating to 4400 y B.P. of the Lakaton'i Anja occupation site. Using large samples of newly-excavated bone from sites in which megafaunal butchery was earlier dated >2000 y B.P. we find no butchery marks until ~1200 y B.P., with associated sedimentary and palynological data of initial human impact about the same time. Close analysis of the Lakaton'i Anja chronology suggests the site dates <1500 y B.P. Diverse evidence from bone damage, palaeoecology, genomic and linguistic history, archaeology, introduced biota and seafaring capability indicate initial human colonization of Madagascar 1350-1100 y B.P.

Grass Functional Traits Differentiate Forest and Savanna in the Madagascar Central Highlands

Abstract: Grassland, woodland and forest are three key vegetation types that co-occur across the central highlands of Madagascar, where the woodland has historically been considered as degraded forest. Here, we use grass functional traits to inform our understanding of the biogeography of Malagasy vegetation and the differentiation of vegetation types in the region. We sampled grass community composition at 56 sites across the central highlands of Madagascar spanning grassland, woodland and forest. We selected seven functional traits known to correlate with different aspects of life history collated via GrassBase (habit, culm type, physiology, leaf consistency, plant height, leaf width and leaf length) for the 71 constituent species. Via analyses of the beta diversity, rank abundance, functional dispersion, functional group richness and community phylogenetic structure of grassland communities, we differentiate these vegetation types using plant functional traits. Grassland and woodland are highly similar in grass species composition and dominated by the same species (Loudetia simplex, Trachypogon spicatus and Schizachyrium sanguineum). In contrast, forest grass species composition significantly differs from both grassland and woodland. Consistent with these species composition patterns, the vegetation types can be distinguished based on physiology, culm type and leaf consistency. Forests harbour primarily C3 grasses, which are almost invariably laterally spreading with herbaceous leaves. In contrast, both grassland and woodland species are predominantly tall, caespitose C4 grasses with coriaceous leaves. Forest grasses are phylogenetically clustered and less diverse than the grassland and woodland communities. Further, we sampled bark thickness of the common woody species occurring in the woodland and forest of the region and found that the relative bark thickness of the woodland tree species was significantly greater than that of forest species from the same genus. We found that the functional traits and architecture of grasses diverge strongly between forest and the grassland-woodland mosaic. We conclude that the woodlands, primarily dominated by Uapaca bojeri Baill., are a form of savanna and not forest as has been previously suggested.

Dietary diversity of 6- to 59-month-old children in rural areas of Moramanga and Morondava districts, Madagascar.

Abstract: Background A dietary imbalance or a disregard for the nutritional needs of children during early childhood can affect their growth. From the age of six months, breast milk is no longer able to meet the energy and micronutrient needs of children; the consumption of adequate complementary foods is therefore essential. Various indicators have been used to assess the quality of children's diets, and the dietary diversity score is a good indicator of children's diets. The objective of this study was to describe the dietary practices of children in rural areas of Moramanga and Morondava, Madagascar, and to identify the determinants of low dietary diversity to prioritize nutritional interventions. Methods We collected dietary data in 2014 on children aged 6–59 months in a study on the determinants of chronic malnutrition using the 24-hour recall method. Data on the characteristics of households and mothers were also collected. We carried out bivariate and multivariate analyses to identify the determinants of low dietary diversity scores for children. Results We included 1824 children: 893 from Moramanga and 931 from Morondava. Approximately 42.1% [95% CI: 39.0–45.4] of the children from Moramanga and 47.6% [95% CI: 44.4–50.8] of those from Morondava had a poorly diversified diet, consisting mainly of foods rich in carbohydrates and poor in meat products. Poor maternal education was associated with a high likelihood of having a non-varied diet in both study areas; the adjusted odds ratios were 2.2 [95% CI: 1.3–3.8] and 4.0 [95% CI: 2.5–6.4] for children from mothers with lower education levels for Moramanga and Morondava, respectively. For children recruited in Morondava, having low household socioeconomic status (adjusted OR: 1.8, 95% CI: 1.2–2.8) and belonging to a household without livestock was associated with a low dietary diversity score (adjusted OR: 1.8, 95% CI 1.2–2.7). Conclusion Our results show the need to improve girls' education, adapt nutrition education programs for mothers based on their level of education, and strengthen poverty reduction programs.

The evolution of fruit colour: phylogeny, abiotic factors and the role of mutualists

Abstract: The adaptive significance of fruit colour has been investigated for over a century While colour can fulfil various functions, the most commonly tested hypothesis is that it has evolved to increase fruit visual conspicuousness and thus promote detection and consumption by seed dispersing animals However, fruit colour is a complex trait which is subjected to various constraints and selection pressures As a result, the effect of animal selection on fruit colour are often difficult to identify, and several studies have failed to detect it Here, we employ an integrative approach to examine what drives variation in fruit colour We quantified the colour of ripe fruit and mature leaves of 97 tropical plant species from three study sites in Madagascar and Uganda We used phylogenetically controlled models to estimate the roles of phylogeny, abiotic factors, and dispersal mode on fruit colour variation Our results show that, independent of phylogeny and leaf coloration, mammal dispersed fruits are greener than bird dispersed fruits, while the latter are redder than the former In addition, fruit colour does not correlate with leaf colour in the visible spectrum, but fruit reflection in the ultraviolet area of the spectrum is strongly correlated with leaf reflectance, emphasizing the role of abiotic factors in determining fruit colour These results demonstrate that fruit colour is affected by both animal sensory ecology and abiotic factors and highlight the importance of an integrative approach which controls for the relevant confounding factors

Ultrahigh‐temperature osumilite gneisses in southern Madagascar record combined heat advection and high rates of radiogenic heat production in a long‐lived high‐T orogen

Abstract: Handling editor: Doug Robinson Abstract We report the discovery of osumilite in ultrahigh-temperature (UHT) metapelites of the Anosyen domain, southern Madagascar. The gneisses equilibrated at ~930°C/0.6 GPa. Monazite and zircon U–Pb dates record 80 Ma of metamorphism. Monazite compositional trends reflect the transition from prograde to retrograde metamorphism at 550 Ma. Eu anomalies in monazite reflect changes in fO2 relative to quartz–fayalite–magnetite related to the growth and breakdown of spinel. The ratio Gd/Yb in monazite records the growth and breakdown of garnet. High rates of radiogenic heat production were the primary control on metamorphic grade at the regional scale. The short duration of prograde metamorphism in the osumilite gneisses (<29 8 Ma) suggests that a thin mantle lithosphere (<80 km) or advective heating may have also been important in the formation of this high-T, low-P terrane.

Frugivores and the evolution of fruit colour

Abstract: The ecological function of fruit colour has been the focus of many studies. The most commonly tested hypothesis is that fruit colour has evolved to facilitate detection by seed-dispersing animals. We tested whether distributions of fruit colours are consistent with the hypothesis that colour is an evolved signal to seed dispersers using a comparative community approach. We compared the contrast between ripe fruits and leaf backgrounds at two sites, one in Madagascar where seed dispersers are primarily night-active, red–green colour-blind lemurs, and the other in Uganda, where most vertebrate seed dispersers are day-active primates and birds with greater capacity for colour vision. We show that fruits in Uganda have higher contrast against leaf background in the red–green and luminance channels whereas fruits in Madagascar contrast more in the yellow–blue channel. These results indicate that fruit colour has evolved to contrast against background leaves in response to the visual capabilities of local seed disperser communities.

Hydrogen production from formic acid decomposition in the liquid phase using Pd nanoparticles supported on CNFs with different surface properties

Abstract: The development of safe and efficient H2 generation/storage materials toward a fuel-cell-based H2 economy as a long-term solution has recently received much attention. Herein we report the development of preformed Pd nanoparticles supported on carbon nanofibers (CNFs) via sol-immobilisation and impregnation techniques as efficient catalysts for the liquid phase decomposition of formic acid to H2. We used CNFs as the preferred choice of support and treated at three different temperatures for the deposition of Pd nanoparticles. They were thoroughly characterised using XRD, XPS, SEM-EDX, TEM, Raman spectroscopy and BET. We observed that the Pd particle size, metal exposure and CNF graphitisation grade play an important role in catalytic performance. We found that Pd/CNFs prepared by the sol-immobilisation method displayed higher catalytic performance than those prepared by the impregnation method, due to the smaller Pd particles and high Pd exposure of the catalysts prepared by the first method. Moreover, we have shown that the best results have been obtained using CNFs with a high graphitisation degree (HHT). DFT studies have been performed to gain insights into the reactivity and decomposition of formic acid along two-reaction pathways on Pd(111), Pd(011) and Pd(001) surfaces.

New Findings in Prunus padus L. Fruits as a Source of Natural Compounds: Characterization of Metabolite Profiles and Preliminary Evaluation of Antioxidant Activity

Abstract: European bird cherry (Prunus padus L.) has been known since the Middle Ages for its medical/food use and high health-promoting value. This study aimed to assess the potential of these fruits as a source of bioactive compounds through the characterization of its physicochemical traits, nutraceutical properties, phytochemical composition via HPLC fingerprint, and antioxidant capacity. Fully ripened fruits of Prunus padus L. (Colorata cv) were collected in mid-July 2017 in Chieri, north-western Italy. The TPC (194.22 ± 32.83 mgGAE/100 gFW) and TAC (147.42 ± 0.58 mgC3G/100 gFW) values were obtained from the analyzed extracts. The most important phytochemical class was organic acids (48.62 ± 2.31%), followed by polyphenols (35.34 ± 1.80%), monoterpenes (9.36 ± 0.64%), and vitamin C (6.68 ± 0.22%). In this research the most important flavonols selected as marker were quercitrin (16.37 ± 3.51 mg/100 gFW) and quercetin (11.86 ± 2.36 mg/100 gFW). Data were reported based on fresh weight. Moreover, fresh fruits showed a mean antioxidant activity value of 17.78 ± 0.84 mmol Fe2+·kg−1. Even though the seeds and leaves contain cyanogenic glycosides, this study showed that these fruits could be a natural source of bioactive compounds with high antioxidant properties, due to the contents of organic and phenolic acids, catechins, and a synergetic effect of vitamin C and flavonoids.

Melioidosis in Africa: Time to Uncover the True Disease Load

Abstract: Melioidosis is an often fatal infectious disease with a protean clinical spectrum, caused by the environmental bacterial pathogen Burkholderia pseudomallei. Although the disease has been reported from some African countries in the past, the present epidemiology of melioidosis in Africa is almost entirely unknown. Therefore, the common view that melioidosis is rare in Africa is not evidence-based. A recent study concludes that large parts of Africa are environmentally suitable for B. pseudomallei. Twenty-four African countries and three countries in the Middle East were predicted to be endemic, but no cases of melioidosis have been reported yet. In this study, we summarize the present fragmentary knowledge on human and animal melioidosis and environmental B. pseudomallei in Africa and the Middle East. We propose that systematic serological studies in man and animals together with environmental investigations on potential B. pseudomallei habitats are needed to identify risk areas for melioidosis. This information can subsequently be used to target raising clinical awareness and the implementation of simple laboratory algorithms for the isolation of B. pseudomallei from clinical specimens. B. pseudomallei was most likely transferred from Asia to the Americas via Africa, which is shown by phylogenetic analyses. More data on the virulence and genomic characteristics of African B. pseudomallei isolates will contribute to a better understanding of the global evolution of the pathogen and will also help to assess potential differences in disease prevalence and outcome.

Transpiration and stomatal conductance in a young secondary tropical montane forest : Contrasts between native trees and invasive understorey shrubs

Abstract: It has been suggested that vigorous secondary tropical forests can have very high transpiration rates, but sap flow and stomatal conductance dynamics of trees and shrubs in these forests are understudied. In an effort to address this knowledge gap, sap flow (thermal dissipation method, 12 trees) and stomatal conductance (porometry, six trees) were measured for young (5–7 years) Psiadia altissima (DC.) Drake trees, a widely occurring species dominating young regrowth following abandonment of swidden agriculture in upland eastern Madagascar. In addition, stomatal conductance (gs) was determined for three individuals of two locally common invasive shrubs (Lantana camara L. and Rubus moluccanus L.) during three periods with contrasting soil moisture conditions. Values of gs for the three investigated species were significantly higher and more sensitive to climatic conditions during the wet period compared with the dry period. Further, gs of the understorey shrubs was much more sensitive to soil moisture content than that of the trees. Tree transpiration rates (Ec) were relatively stable during the dry season and were only affected somewhat by soil water content at the end of the dry season, suggesting the trees had continued access to soil water despite drying out of the topsoil. The Ec exhibited a plateau-shaped relation with vapour pressure deficit (VPD), which was attributed to stomatal closure at high VPD. Vapour pressure deficit was the major driver of variation in Ec, during both the wet and the dry season. Overall water use of the trees was modest, possibly reflecting low site fertility after three swidden cultivation cycles. The observed contrast in gs response to soil water and climatic conditions for the trees and shrubs underscores the need to take root distributions into account when modelling transpiration from regenerating tropical forests.

Short and hyperthermic torpor responses in the Malagasy bat Macronycteris commersoni reveal a broader hypometabolic scope in heterotherms.

Abstract: The energy budgets of animal species are closely linked to their ecology, and balancing energy expenditure with energy acquisition is key for survival. Changes in animals’ environments can be challenging, particularly for bats, which are small endotherms with large uninsulated flight membranes. Heterothermy is a powerful response used to cope with changing environmental conditions. Recent research has revealed that many tropical and subtropical species are heterothermic and display torpor with patterns unlike those of “classical” heterotherms from temperate and arctic regions. However, only a handful of studies investigating torpor in bats in their natural environment exist. Therefore, we investigated whether the Malagasy bat Macronycteris commersoni enters torpor in the driest and least predictable region in Madagascar. We examined the energy balance and thermal biology of M. commersoni in the field by relating metabolic rate (MR) and skin temperature (Tskin) measurements to local environmental characteristics in the dry and rainy seasons. Macronycteris commersoni entered torpor and showed extreme variability in torpor patterns, including surprisingly short torpor bouts, lasting on average 20 min, interrupted by MR peaks. Torpid MR was remarkably low (0.13 ml O2 h−1 g−1), even when Tskin exceeded that of normothermia (41 °C). Macronycteris commersoni is thus physiologically capable of (1) entering torpor at high ambient temperature and Tskin and (2) rapidly alternating between torpid and normothermic MR resulting in very short bouts. This suggests that the scope of hypometabolism amongst heterothermic animals is broader than previously assumed and underlines the importance of further investigation into the torpor continuum.