University of Göttingen

About: University of Göttingen is a education organization based out in Göttingen, Germany. It is known for research contribution in the topics: Population & Gene. The organization has 43851 authors who have published 86318 publications receiving 3010295 citations. The organization is also known as: Georg-August-Universität Göttingen & Universität Göttingen.

SOM fractionation methods: Relevance to functional pools and to stabilization mechanisms

Abstract: Soil organic matter (SOM) consists of various functional pools that are stabilized by specific mechanisms and have certain turnover rates. For the development of mechanistic models that predict changes in SOM storage, these pools have to be quantified and characterized. In the past, numerous fractionation schemes have been developed to separate and analyse such SOM fractions. In this review, the SOM fractions obtained with such operational fractionation procedures are described in terms of their pool sizes, chemical properties, and turnover rates. The main objective of this review is to evaluate these operationally defined fractions with respect to their suitability to describe functional SOM pools that could be used to parameterize SOM turnover models. Fractionation procedures include (1) physical separation of SOM into aggregate, particle size, and density fractions and fractions according to their magnetic susceptibility, and (2) various wet chemical procedures that fractionate SOM according to solubility, hydrolysability, and resistance to oxidation or by destruction of the mineral phase. Furthermore, combinations of fractionation methods are evaluated. The active SOM pool with turnover rates

Standardized RT-PCR analysis of fusion gene transcripts from chromosome aberrations in acute leukemia for detection of minimal residual disease. Report of the BIOMED-1 Concerted Action: investigation of minimal residual disease in acute leukemia.

Abstract: Prospective studies on the detection of minimal residual disease (MRD) in acute leukemia patients have shown that large-scale MRD studies are feasible and that clinically relevant MRD-based risk group classification can be achieved and can now be used for designing new treatment protocols. However, multicenter international treatment protocols with MRD-based stratification of treatment need careful standardization and quality control of the MRD techniques. This was the aim of the European BIOMED-1 Concerted Action 'Investigation of minimal residual disease in acute leukemia: international standardization and clinical evaluation' with participants of 14 laboratories in eight European countries (ES, NL, PT, IT, DE, FR, SE and AT). Standardization and quality control was performed for the three main types of MRD techniques, ie flow cytometric immunophenotyping, PCR analysis of antigen receptor genes, and RT-PCR analysis of well-defined chromosomal aberrations. This study focussed on the latter MRD technique. A total of nine well-defined chromosome aberrations with fusion gene transcripts were selected: t(1;19) with E2A-PBX1, t(4;11) with MLL-AF4, t(8;21) with AML1-ETO, t(9;22) with BCR-ABL p190 and BCR-ABL p210, t(12;21) with TEL-AML1, t(15;17) with PML-RARA, inv (16) with CBFB-MYH11, and microdeletion 1p32 with SIL-TAL1. PCR primers were designed according to predefined criteria for single PCR (external primers A B) and nested PCR (internal primers C D) as well as for 'shifted' PCR with a primer upstream (E5' primer) or downstream (E3' primer) of the external A B primers. The 'shifted' E primers were designed for performing an independent PCR together with one of the internal primers for confirmation (or exclusion) of positive results. Various local RT and PCR protocols were compared and subsequently a common protocol was designed, tested and adapted, resulting in a standardized RT-PCR protocol. After initial testing (with adaptations whenever necessary) and approval by two or three laboratories, the primers were tested by all participating laboratories, using 17 cell lines and patient samples as positive controls. This testing included comparison with local protocols and primers as well as sensitivity testing via dilution experiments. The collaborative efforts resulted in standardized primer sets with a minimal target sensitivity of 10-2 for virtually all single PCR analyses, whereas the nested PCR analyses generally reached the minimal target sensitivity of 10-4. The standardized RT-PCR protocol and primer sets can now be used for molecular classification of acute leukemia at diagnosis and for MRD detection during follow-up to evaluate treatment effectiveness.

Scale‐dependent effects of landscape context on three pollinator guilds

Abstract: Most ecological processes and interactions depend on scales much larger than a single habitat, and therefore it is important to link spatial patterns and ecological processes at a landscape scale. Here, we analyzed the effects of landscape context on the distribution of bees (Hymenoptera: Apoidea) at multiple spatial scales with respect to the following hypotheses: (1) Local abundance and diversity of bees increase with increasing proportion of the surrounding seminatural habitats. (2) Solitary wild bees, bumble bees, and honey bees respond to landscape context at different spatial scales. We selected 15 landscape sectors and determined the percentage of seminatural habitats and the diversity of habitat types at eight spatial scales (radius 250-3000 m) by field inspections and analyses of vegetation maps using two Geographic Information Systems. The percentage of semi- natural habitats varied between 1.4% and 28%. In the center of each landscape sector a patch of potted flowering plants (four perennial and two annual species) was placed in the same habitat type, a grassy field margin adjacent to cereal fields. In all, 865 wild bee individuals and 467 honey bees were observed and an additional 475 individuals were caught for species identification. Species richness and abundance of solitary wild bees showed a close positive correlation with the percentage of seminatural habitats at small scales up to 750 m, whereas bumble bees and honey bees did not respond to landscape context at these scales. In contrast, honey bees were correlated with landscape context at large scales. The densities of flower-visiting honey bees even increased with decreasing proportion of seminatural habitats at a radius of 3000 m. We are not aware of any empirical studies showing contrasting foraging patterns related to landscape context at different spatial scales. We conclude (1) that local landscape destruction affects solitary wild bees more than social bees, possibly changing mutualistic plant-pollinator and competitive wild bees- honey bees interactions and (2) that only analyses of multiple spatial scales may detect the importance of the landscape context for local pollinator communities.

Searching for dark matter annihilation from Milky Way dwarf spheroidal galaxies with six years of Fermi Large Area Telescope data

Abstract: The dwarf spheroidal satellite galaxies (dSphs) of the Milky Way are some of the most dark matter (DM) dominated objects known. We report on γ-ray observations of Milky Way dSphs based on six years of Fermi Large Area Telescope data processed with the new Pass8 event-level analysis. None of the dSphs are significantly detected in γ rays, and we present upper limits on the DM annihilation cross section from a combined analysis of 15 dSphs. These constraints are among the strongest and most robust to date and lie below the canonical thermal relic cross section for DM of mass ≲100 GeV annihilating via quark and τ-lepton channels.

Numerical renormalization group method for quantum impurity systems

Abstract: In the early 1970s, Wilson developed the concept of a fully nonperturbative renormalization group transformation. When applied to the Kondo problem, this numerical renormalization group (NRG) method gave for the first time the full crossover from the high-temperature phase of a free spin to the low-temperature phase of a completely screened spin. The NRG method was later generalized to a variety of quantum impurity problems. The purpose of this review is to give a brief introduction to the NRG method, including some guidelines for calculating physical quantities, and to survey the development of the NRG method and its various applications over the last 30 years. These applications include variants of the original Kondo problem such as the non-Fermi-liquid behavior in the two-channel Kondo model, dissipative quantum systems such as the spin-boson model, and lattice systems in the framework of the dynamical mean-field theory.