Showing papers by "University of the Littoral Opal Coast published in 2007"

Effect of natural iron fertilization on carbon sequestration in the Southern Ocean

Abstract: The availability of iron limits primary productivity and the associated uptake of carbon over large areas of the ocean. Iron thus plays an important role in the carbon cycle, and changes in its supply to the surface ocean may have had a significant effect on atmospheric carbon dioxide concentrations over glacial-interglacial cycles. To date, the role of iron in carbon cycling has largely been assessed using short-term iron-addition experiments. It is difficult, however, to reliably assess the magnitude of carbon export to the ocean interior using such methods, and the short observational periods preclude extrapolation of the results to longer timescales. Here we report observations of a phytoplankton bloom induced by natural iron fertilization--an approach that offers the opportunity to overcome some of the limitations of short-term experiments. We found that a large phytoplankton bloom over the Kerguelen plateau in the Southern Ocean was sustained by the supply of iron and major nutrients to surface waters from iron-rich deep water below. The efficiency of fertilization, defined as the ratio of the carbon export to the amount of iron supplied, was at least ten times higher than previous estimates from short-term blooms induced by iron-addition experiments. This result sheds new light on the effect of long-term fertilization by iron and macronutrients on carbon sequestration, suggesting that changes in iron supply from below--as invoked in some palaeoclimatic and future climate change scenarios--may have a more significant effect on atmospheric carbon dioxide concentrations than previously thought.

Susceptibility of staphylococcal biofilms to enzymatic treatments depends on their chemical composition.

Abstract: Bacterial infections are serious complications after orthopaedic implant surgery. Staphylococci, with Staphylococcus epidermidis as a leading species, are the prevalent and most important species involved in orthopaedic implant-related infections. The biofilm mode of growth of these bacteria on an implant surface protects the organisms from the host’s immune system and from antibiotic therapy. Therapeutic agents that disintegrate the biofilm matrix would release planktonic cells into the environment and therefore allow antibiotics to eliminate the bacteria. An addition of a biofilm-degrading agent to a solution used for washing–draining procedures of infected orthopaedic implants would greatly improve the efficiency of the procedure and thus help to avoid the removal of the implant. We have previously shown that the extracellular staphylococcal matrix consists of a poly-N-acetylglucosamine (PNAG), extracellular teichoic acids (TAs) and protein components. In this study, we accessed the sensitivity of pre-formed biofilms of five clinical staphylococcal strains associated with orthopaedic prosthesis infections and with known compositions of the biofilm matrix to periodate, Pectinex Ultra SP, proteinase K, trypsin, pancreatin and dispersin B, an enzyme with a PNAG-hydrolysing activity. We also tested the effect of these agents on the purified carbohydrate components of staphylococcal biofilms, PNAG and TA. We found that the enzymatic detachment of staphylococcal biofilms depends on the nature of their constituents and varies between the clinical isolates. We suggest that a treatment with dispersin B followed by a protease (proteinase K or trypsin) could be capable to eradicate biofilms of a variety of staphylococcal strains on inert surfaces.

Growth and condition indices in juvenile sole Solea solea measured to assess the quality of essential fish habitat

Abstract: We used growth rates (estimated from otolith microstructure), morphometric (Fulton's K condition index) and lipid (triacylglycerols:sterols ratio, TAG:ST) condition indices measured on 0-group juveniles of common sole, to compare the habitat quality of 7 nursery grounds with differing levels of anthropogenic pressure. Along the French coast of the Southern Bight of the North Sea and the Eastern English Channel, we compared 2 sites located in intensively developed and industrialised harbour areas (Dunkerque and Calais), 1 site in a medium and less industrialised harbour (Boulogne), 1 site near a large and polluted estuary (Seine) and 3 other sites located near small estuaries less subject to human pressure (Canche, Authie and Somme). Indicators of human disturbance as well as hydrological and biotic data were used to establish between-site differences in environmental quality. Our results indicate consistent differences in the growth and condition indices of 0-group sole among the 7 sites. Sole had the slowest growth (mean G = 0.54 mm d–1) and lowest condition indices (mean K = 1.07; TAG:ST = 0.32) at Dunkerque and Calais and the fastest growth (mean G = 0.70 mm d–1) and highest condition indices (mean K = 1.19; TAG:ST = 2.18) at the Authie, Canche and Somme estuaries. The indices measured in this study correlated well with anthropogenic disturbance and may provide a useful tool to assess habitat quality. Sites with highest sediment chemical contaminants had the lowest habitat quality and, through growth and lipid-storage limitation, could dramatically lower over-winter survival of the juveniles living in these nursery grounds

Studies of the activation process over Pd perovskite-type oxides used for catalytic oxidation of toluene

Abstract: Calcined and reduced catalysts Pd/LaBO 3 (B = Co, Fe, Mn, Ni) were used for the total oxidation of toluene. Easiness of toluene destruction was found to follow the sequence based on the T 50 values (temperature at which 50% of toluene is converted): Pd/LaFeO 3 > Pd/LaMnO 3+ δ > Pd/LaCoO 3 > Pd/LaNiO 3 . In order to investigate the activation process (calcination and reduction) in detail, the reducibility of the samples was evaluated by H 2 -TPR on the calcined catalysts. Additionally, characterization of the Pd/LaBO 3 (B = Co, Fe) surface was carried out by X-ray photoelectron spectroscopy (XPS) at each stage of the global process, namely after calcination, reduction and under catalytic reaction at either 150 or 200 °C for Pd/LaFeO 3 and either 200 or 250 °C for LaCoO 3 . The different results showed that palladium oxidized entities were totally reduced after pre-reduction at 200 °C for 2 h (2 L/h, 1 °C/min). As LaFeO 3 was unaffected by such a treatment, for the other perovskites, the cations B are partially reduced as B 3+ (B = Mn) or B 2+ even to B 0 (B = Co, Ni). In the reactive stream (0.1% toluene in air), Pd 0 reoxidized partially, more rapidly over Co than Fe based catalysts, to give a Pd 2+ /Pd 4+ and Pd 0 /Pd 2+ /Pd 4+ surface redox states, respectively. Noticeably, reduced cobalt species are progressively oxidized on stream into Co 3+ in a distorted environment. By contrast, only the lines characteristic of the initial perovskite lattice were detected by XRD studies on the used catalysts. The higher activity performance of Pd/LaFeO 3 for the total oxidation of toluene was attributed here to a low temperature of calcination and to a remarkable high stability of the perovskite lattice whatever the nature of the stream which allowed to keep a same palladium dispersion at the different stages of the process and to resist to the oxidizing experimental conditions. On the contrary, phase transformations for the other perovskite lattices along the process were believed to increase the palladium particle size responsible of a lower activity.

Influence of the exchanged cation in Pd/BEA and Pd/FAU zeolites for catalytic oxidation of VOCs

Abstract: 0.5 wt% palladium supported on exchanged BEA and FAU zeolites were prepared, characterized and tested in the total oxidation of volatile organic compounds (VOCs). The BEA and FAU zeolites were exchanged with different cations to study the influence of alkali metal cations (Na + , Cs + ) and H + in Pd-based catalysts on propene and toluene total oxidation. The exchange with different cations (Na + , Cs + ) and H + led to a decrease of the surface area and the micropore volume. All Pd/BEA and Pd/FAU zeolites were found to be powerful catalysts for the total oxidation of VOCs. They were active at low temperature and totally selective for CO 2 and H 2 O. However, their activity depends significantly on the type of zeolite and on the nature of the charge-compensating cation. The activity order for propene and toluene oxidation on FAU catalysts, Pd/CsFAU > Pd/NaFAU > Pd/HFAU, is the reverse of the activity order on BEA catalysts: Pd/HBEA > Pd/NaBEA > Pd/CsBEA. The catalytic activities can be rationalized in terms of the influence of the electronegativity of the charge-compensating cation on the Pd particles, the Pd dispersion, the PdO reducibility and the adsorption energies for VOCs.

Additional effects of cobalt precursor and zirconia support modifications for the design of efficient VOC oxidation catalysts

Abstract: The influence of the ZrO 2 support modification by Y 2 O 3 and the presence of ethylenediamine (“en”) during the preparation of Co/ZrO 2 were studied and compared with a reference catalyst conventionally prepared by impregnation of ZrO 2 with an aqueous solution of Co(NO 3 ) 2 . The effect of the en/Co molar ratio ( x = 1–3) was studied. Activation of cobalt species was followed by differential thermal and thermogravimetric analyses (DTA/TG) analyses and by specific surface area measurements which evidence the complete cobalt precursor decomposition at 450 °C, whatever the support composition and the en/Co molar ratio. The addition of an aqueous solution of ethylenediamine to a cobalt nitrate solution led to a strong increase in the catalytic activity of the activated solids for the toluene deep oxidation as compared to the reference catalyst. The best catalytic results were explained in terms of cobalt oxides dispersion (X-ray diffraction (XRD)) and also in terms of Co-support interaction (H 2 -temperature-programmed reduction (TPR)). The generated cobalt species were reducible at much lower temperatures and were more active in the toluene total oxidation. Finally, an efficient catalyst was produced combining the modifications of the support by yttrium oxide and of the precursor (use of ethylenediamine).

The importance of small-sized copepods in a frontal area of the Aegean Sea

Abstract: Distribution, production and grazing of the copepod community were investigated in the northern Aegean Sea, which is characterized by a permanent thermohaline front. Cruises were conducted along a transect crossing the frontal area during spring and late summer. Biomass and production of autotrophs were measured by size fractionation and heterotrophic nanoflagellates and ciliates were also studied. Copepod biomass, production and grazing impact on the phytoplankton and ciliate populations were estimated. The copepod community was sampled with a 45 mm net to include the smallest species and their developmental stages. The size, structure and distribution of the phytoplankton imply that most carbon was fixed by picoplankton during both seasons and throughout the study area. The partitioning of carbon among the different plankton compartments was not a broadbased pyramid and the biomass of heterotrophs was higher than that of autotrophs, except in the non-frontal region during spring. Copepod biomass was substantially higher in the frontal area. Our results showed that the small-sized copepods (calanoids and cyclopoids) dominated in terms of biomass and production, but also had a greater influence on the efficiency of the trophic coupling between the primary producers and the protozooplankton than the larger species, stressing their importance in the northern Aegean Sea and the Eastern Mediterranean in general.

Ontogenetic and spatial variation in the diet of hake (Merluccius merluccius) in the Bay of Biscay and the Celtic Sea

Abstract: Analysis of the diet of trawl-caught hake (Merluccius merluccius) from three locations in the Bay of Biscay and the Celtic Sea in autumn 2001 showed that small hake fed almost exclusively on crustaceans (mainly euphausiids), but that there was a significant shift towards a fully piscivorous diet in hake 23 cm. A change in fish prey was also size-dependent, because smaller hake ( 30 cm) preyed on small pelagic fish (3-12 cm), such as horse mackerel, anchovy, and pilchard, and larger hake on larger demersal prey (12-23 cm), such as blue whiting. There was a significant positive relationship between hake and fish prey length. In terms of fish prey selectivity, hake exhibited particular preference for small pelagic prey (anchovy, pilchard, and argentine) and for other hake. The diet did not generally reflect fish prey availability. Although horse mackerel and blue whiting were the two most abundant fish prey species in the environment, they were not positively selected by hake. Cannibalism accounted for a non-negligible part of the diet and was observed mainly in large hake ( 30 cm). For all sizes analysed, conspecifics constituted 19.2%W of the diet and the frequency of occurrence of hake in the stomachs was 10.53%. Most hake prey were 0-group juveniles ( 20 cm). Hake cannibalism appeared to be influenced mainly by the abundance of juveniles and the overlap between distribution patterns of juveniles and adults.

The importance of fungal pectinolytic enzymes in plant invasion, host adaptability and symptom type

Abstract: This review describes the extent to which recent works performed in the last decade have clarified the role of different pectinase activities in pathogenicity of fungi responsible for a wide array of diseases. Beyond physiological or biochemical investigations, strategies that have been used include gene cloning and expression studies as well as gene disruption or replacement. Pectinase involvement in fungal diseases has been considered according to the type of symptoms produced by the studied fungi. Although pectinolytic enzymes are clearly important for soft rot diseases, their role cannot be anticipated for other diseases as a whole. Each symptom type must therefore be investigated separately. Moreover, before antifungal strategies can be considered, several strains and/or mutants must be analysed.

Retrieving of particulate matter from optical measurements: A semiparametric approach

Abstract: [1] The fine particle abundance, i.e., particle matter (PM) concentration, is one of the indicators of air quality and is therefore subject to ground-based measurements. Complementary satellite aerosol remote sensing techniques provide one with maps of the aerosol optical thickness (AOT), which is sensitive to particle abundance. This paper investigates the problem of retrieving the PM concentration from the AOT, both on daily average values, on the basis of a large data set where data from the air quality networks are combined with ground-based measurements of the AOTs. It is found that a linear model fails at explaining the data well but that the performance may be significantly improved when such a linear relationship is conditioned on auxiliary parameters, mainly meteorological variables. The proposed model is expressed as an additive varying coefficient model (AVCM), which is defined as a linear model where the coefficients are additive functions of the auxiliary parameters. The model is represented using penalized smoothing splines, allowing for a proper control of the overall number of degrees of freedom via multiple smoothness parameters selection. The methodology is applied to data collected around Lille (France). The PM 10 concentrations are retrieved with an average uncertainty of less than 20%, leading to a correlation coefficient of 0.87 between fitted and expected PM 10 .

Treatment of osteonecrosis of the femoral head with hBMP-2-gene-modified tissue-engineered bone in goats

Abstract: The efficacy of β-tricalcium phosphate (β-TCP) loaded with bone morphogenetic protein-2 (BMP-2)-gene-modified bone-marrow mesenchymal stem cells (BMSCs) was evaluated for the repair of experimentally-induced osteonecrosis of the femoral head in goats. Bilateral early-stage osteonecrosis was induced in adult goats three weeks after ligation of the lateral and medial circumflex arteries and delivery of liquid nitrogen into the femoral head. After core decompression, porous β-TCP loaded with BMP-2 gene- or β-galactosidase (gal)-gene-transduced BMSCs was implanted into the left and right femoral heads, respectively. At 16 weeks after implantation, there was collapse of the femoral head in the untreated group but not in the BMP-2 or β-gal groups. The femoral heads in the BMP-2 group had a normal density and surface, while those in the β-gal group presented with a low density and an irregular surface. Histologically, new bone and fibrous tissue were formed in the macropores of the β-TCP. Sixteen weeks after implantation, lamellar bone had formed in the BMP-2 group, but there were some empty cavities and residual fibrous tissue in the β-gal group. The new bone volume in the BMP-2 group was significantly higher than that in the β-gal group. The maximum compressive strength and Young’s modulus of the repaired tissue in the BMP-2 group were similar to those of normal bone and significantly higher than those in the β-gal group. Our findings indicate that porous β-TCP loaded with BMP-2-gene-transduced BMSCs are capable of repairing early-stage, experimentally-induced osteonecrosis of the femoral head and of restoring its mechanical function.

Catalytic Removal of Toluene in Air over Co–Mn–Al Nano-oxides Synthesized by Hydrotalcite Route

Abstract: Co–Mn–Al hydrotalcite type solids were synthesized as precursors of catalysts for the total oxidation of toluene in air. For the as-prepared solids, XRD measurements indicate the coexistence of hydrotalcite and MnCO3 phases. When calcination is performed at 500 °C, different mixed oxides are found as a function of Co:Mn molar ratio and preparation method, and very high specific surface areas were obtained for the Co–Mn solids. The comparison of catalytic activities in the presence of calcined hydrotalcites with those in the presence of calcined hydroxides evidences the superiority of the first oxides due to their higher reducibility. Co–Mn–Al nano-oxides synthesized using hydrotalcite type solids as precursors, are very promising candidates for the substitution of noble metal based solids.

Phosphate stimulates matrix Gla protein expression in chondrocytes through the extracellular signal regulated kinase signaling pathway.

Abstract: Whereas increasing evidence suggests that inorganic phosphate (Pi) may act as a signaling molecule in mineralization-competent cells, its mechanisms of action remain largely unknown. The aims of the present work were to determine whether Pi regulates expression of matrix Gla protein (MGP), a mineralization inhibitor, in growth plate chondrocytes and to identify the involved signaling pathways. Chondrogenic ATDC5 cells and primary growth plate chondrocytes were used. Messenger RNA and protein analyses were performed by quantitative PCR and Western blotting, respectively. The activation and role of MAPKs were, respectively, determined by Western blotting and the use of specific inhibitors. Immunohistological detection of ERK1/2 was performed in rib organ cultures from newborn mice. The results indicate that Pi markedly stimulates expression of MGP in ATDC5 cells and primary growth plate chondrocytes. Investigation of the involved intracellular signaling pathways reveals that Pi activates ERK1/2 in a cell-specific manner, because the stimulation was observed in ATDC5 and primary chondrocytes, MC3T3-E1 osteoblasts, and ST2 stromal cells, but not in L929 fibroblasts or C2C12 myogenic cells. Accordingly, immunohistological detection of ERK1/2 phosphorylation in rib growth plates revealed a marked signal in chondrocytes. Finally, a specific ERK1/2 inhibitor, UO126, blocks Pi-stimulated MGP expression in ATDC5 cells, indicating that ERK1/2 mediates, mainly, the effects of Pi. These data demonstrate, for the first time, that Pi regulates MGP expression in growth plate chondrocytes, thereby suggesting a key role for Pi and ERK1/2 in the regulation of bone formation.

Impact of surface heterogeneity on a buoyancy-driven convective boundary layer in light winds

Abstract: Land-use practices such as deforestation or agricultural management may affect regional climate, ecosystems and water resources. The present study investigates the impact of surface heterogeneity on the behaviour of the atmospheric boundary layer (ABL), at a typical spatial scale of 1 km. Large-eddy simulations, using an interactive soil–vegetation–atmosphere surface scheme, are performed to document the structure of the three-dimensional flow, as driven by buoyancy forces, over patchy terrain with different surface characteristics (roughness, soil moisture, temperature) on each individual patch. The patchy terrain consists of striped and chessboard patterns. The results show that the ABL strongly responds to the spatial configuration of surface heterogeneities. The stripe configuration made of two patches with different soil moisture contents generates the development of a quasi- two-dimensional inland breeze, whereas a three-dimensional divergent flow is induced by chessboard patterns. The feedback of such small-scale atmospheric circulations on the surface fluxes appears to be highly non-linear. The surface sensible and latent heat fluxes averaged over the 25-km2 domain may vary by 5% with respect to the patch arrangement.

Bio-optical Properties of Coastal Waters in the Eastern English Channel

Abstract: Strong tidal currents, shallow water and numerous freshwater inputs characterize the coastal waters of the eastern English Channel. These case 2 waters were investigated through an intensive sampling effort in 2000 aiming to study the distribution and variability of the Chromophoric Dissolved Organic Matter (CDOM), Non-Algal Particles (NAP) and phytoplankton absorption at the mesoscale. Four cruises were carried out in February, March, May and July and more than 80 stations each cruise were sampled for hydrographical, chemical and bio-optical analyses. Results showed two distinct situations, the winter period characterized by the strong dominance of CDOM absorption over the particulate matter, and the spring–summer period when phytoplankton and CDOM represented the same contribution. Meteorology was the main factor driving the bio-optical properties of the water column in winter whereas in spring–summer the biological activity seemed to be the more active driving force. The algal community composition in term of dominant cell size and, therefore pigment packaging, is the main factor driving the phytoplankton specific absorption in the water column. Photoprotective pigments did not significantly influence algal absorption, due to turbid and highly mixed water masses. This feature also explained the bio-optical homogeneity found along the water column. On the mesoscale, distinct bio-optical provinces were defined in relation with the observed bio-hydrographical variability.

Impact of a sea breeze on the boundary-layer dynamics and the atmospheric stratification in a coastal area of the North Sea

Abstract: In-situ sodar and lidar measurements were coupled with numerical simulations for studying a sea-breeze event in a flat coastal area of the North Sea. The study's aims included the recognition of the dynamics of a sea-breeze structure, and its effects on the lower troposphere stratification and the three-dimensional (3D) pollutant distribution. A sea breeze was observed with ground-based remote sensing instruments and analysed by means of numerical simulations using the 3D non-hydrostatic atmospheric model Meso-NH. The vertical structure of the lower troposphere was experimentally determined from the lidar and sodar measurements, while numerical simulations focused on the propagation of the sea breeze inland. The sea-breeze front, the headwind, the thermal internal boundary layer, the gravity current and the sea-breeze circulation were observed and analysed. The development of a late stratification was also observed by the lidar and simulated by the model, suggesting the formation of a stable multilayered structure. The transport of passive tracers inside the sea breeze and their redistribution above the gravity current was simulated too. Numerical modelling showed that local pollutants may travel backward to the sea above the gravity current at relatively low speed due to the shearing between the landward gravity current and the seaward synoptic wind. Such dynamic conditions may enhance an accumulation of pollutants above coastal industrial areas.

Correlative analysis of Mycosphaerella graminicola pathogenicity and cell wall‐degrading enzymes produced in vitro: the importance of xylanase and polygalacturonase

Abstract: Eight Mycosphaerella graminicola isolates were investigated for correlations between pathogenicity and the in vitro production of cell wall-degrading enzymes. Isolate pathogenicity was evaluated in terms of lesion and production of pycnidia in wheat leaves. Additionally, the isolates were compared over time for their ability to produce in vitro significant levels of xylanase (EC 3·2·1·8), β-xylosidase (EC 3·2·1·37), β-1,3-glucanase (EC 3·2·1·6), cellulose (EC 3·2·1·4) and polygalacturonase (EC 3·2·1·15) activities when grown in a liquid medium. Correlation tests and principal component analysis revealed a significant correlation between the in vitro production of xylanase and pectinase and pathogenicity components. Xylanase was correlated to necrosis frequency (r = 0·795), β-xylosidase was correlated to the mean of the lesion length (r = −0·787), whereas polygalacturonase was correlated to the time when 50% of the leaves contained a lesion (r = 0·776), the lesion frequency (r = 0·646) and the time when 50% of the leaves showed pycnidia (r = −0·711). The results suggest that these two groups of cell wall-degrading enzymes are therefore likely to be key determinants of pathogenicity in M. graminicola.

MERIS in-flight spectral calibration

Abstract: This paper will describe the spectral calibration activities conducted during the MERIS commissioning phase and during operation since orbit 12000. MERIS is a medium resolution (300-1200m) push-broom imaging spectrometer covering the spectral domain 390-1040nm with 15 bands, programmable in position and width down to steps of 1.25nm. The onboard spectral calibration hardware is based on the use of an Erbium doped-diffuser panel presenting well-defined absorption peaks. In the spectral calibration mode, MERIS is configured with narrow bands centred on an Erbium absorption feature (two are used). The first orbit, the instrument is calibrated by viewing the "white" radiometric diffuser plate and the following orbit the "pink" Erbium diffuser plate is deployed. This method allows each of the MERIS detectors involved to be characterized in wavelength. The Fraunhofer absorption lines were used to complement these results by providing additional measurements in the violet and near infrared part of the spectrum. For this method, MERIS was configured both for Earth and diffuser observations and acquired data for only a limited number of orbits. This procedure was repeated for different band settings covering a number of Fraunhofer absorption lines. Finally, using Oxygen (O2A) absorption Earth observation data, two different approaches were developed, one based on the retrieval of surface pressure and one based on the shape of the O2A absorption band. Both methods were developed for clear sky land observations, but their performances are improved over bright land targets. Both methods agree to within an accuracy of 0.02 nm. The results from the different methods are analyzed in order to propose a spectral model for the MERIS instrument. Preliminary results of the spectral variation with time are reported. Except camera 4, the instrument is quite stable with time. Camera 4 needs further investigations to better understand its behaviour. Except for the use of the MERIS oxygen band, the spectral characterization of the other MERIS bands is achieved within the nominal accuracy (1 nm).