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In Posidonia oceanica cadmium induces changes in DNA methylation and chromatin patterning

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TLDR
The data demonstrate that Cd perturbs the DNA methylation status through the involvement of a specific methyltransferase, linked to nuclear chromatin reconfiguration likely to establish a new balance of expressed/repressed chromatin.
Abstract
In mammals, cadmium is widely considered as a non-genotoxic carcinogen acting through a methylation-dependent epigenetic mechanism. Here, the effects of Cd treatment on the DNA methylation patten are examined together with its effect on chromatin reconfiguration in Posidonia oceanica. DNA methylation level and pattern were analysed in actively growing organs, under short- (6 h) and long- (2 d or 4 d) term and low (10 mM) and high (50 mM) doses of Cd, through a Methylation-Sensitive Amplification Polymorphism technique and an immunocytological approach, respectively. The expression of one member of the CHROMOMETHYLASE (CMT) family, a DNA methyltransferase, was also assessed by qRT-PCR. Nuclear chromatin ultrastructure was investigated by transmission electron microscopy. Cd treatment induced a DNA hypermethylation, as well as an up-regulation of CMT, indicating that de novo methylation did indeed occur. Moreover, a high dose of Cd led to a progressive heterochromatinization of interphase nuclei and apoptotic figures were also observed after long-term treatment. The data demonstrate that Cd perturbs the DNA methylation status through the involvement of a specific methyltransferase. Such changes are linked to nuclear chromatin reconfiguration likely to establish a new balance of expressed/repressed chromatin. Overall, the data show an epigenetic basis to the mechanism underlying Cd toxicity in plants.

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References
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Journal ArticleDOI

Response to cadmium in higher plants

TL;DR: It is proposed that, above all in response to acute cadmium stress, various mechanisms might operate both in an additive and in a potentiating way, and a holistic and integrated approach seems to be necessary in the study of the response of higher plants to Cadmium.
Book

The Flavonoids: Advances in Research since 1980

TL;DR: In this paper, the authors discuss the distribution and evolution of the Flavonoids in the Lower Plants and its evolution in the Dicotyledons of the world's plants.
Journal ArticleDOI

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.

Robert L. Strausberg, +81 more
TL;DR: The National Institutes of Health Mammalian Gene Collection (MGC) Program is a multiinstitutional effort to identify and sequence a cDNA clone containing a complete ORF for each human and mouse gene.
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Gene silencing by microRNAs: contributions of translational repression and mRNA decay.

TL;DR: This work has shown that microRNAs can induce mRNA degradation in animals and, conversely, translational repression in plants and shed light on the specific mechanisms of target silencing.
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The impact of next-generation sequencing technology on genetics.

TL;DR: Next-generation sequencing technologies are surveyed and it is considered how they can provide a more complete picture of how the genome shapes the organism.
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