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Whole-genome sequencing in health care: recommendations of the European Society of Human Genetics.

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TLDR
Focusing on the clinical diagnostics setting, this paper is intended to contribute to the discussion and the development of guidelines in this fast-moving field, and provide recommendations for health-care professionals.
Abstract
In recent years, the cost of generating genome information has shown a rapid decline.1, 2 High-throughput genomic technologies make it possible to sequence the whole exome or genome of a person at a price that is affordable for some health-care systems. More services based on these technologies are now becoming available for patients, raising the issue of how to ensure that these are provided appropriately. In order to determine both the clinical utility of genetic testing and assure a high quality of the analysis, the interpretation and communication of the results must be discussed so that patients can receive appropriate advice and genetic testing. The Public and Professional Policy Committee (PPPC) and the Quality Committee of the European Society of Human Genetics (ESHG) addressed these challenges at a joint workshop in Gothenburg, Sweden, in 2010.3 PPPC also organised workshops in Amsterdam, the Netherlands (January 2011 in collaboration with the EU-funded project TECHGENE, January 2012). A report for the Health Council of the Netherlands served as a background document for the PPPC's reflections.4 Focusing on the clinical diagnostics setting, this paper is intended to contribute to the discussion and the development of guidelines in this fast-moving field, and provide recommendations for health-care professionals. The paper and recommendations were posted on the ESHG website from 20 June to 1 August 2012 for comment by the membership. The final version was approved by the ESHG Board in December 2012.

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Journal ArticleDOI

Defining the Clinical Value of a Genomic Diagnosis in the Era of Next-Generation Sequencing

TL;DR: The value of establishing a diagnosis using genome-scale testing is addressed and the benefits and drawbacks of such testing are highlighted and potential future applications of genomic sequencing are discussed, such as screening for rare conditions.
Journal ArticleDOI

Ethical Issues in Newborn Sequencing Research: The Case Study of BabySeq.

TL;DR: It is argued that researchers should design their pediatric studies to avoid, when possible, identifying adult-onset-only genetic variants and that parents should not be offered the return of this information if discovered unless relevant for the child’s current or imminent health.
Journal ArticleDOI

Recontact in clinical practice: a survey of clinical genetics services in the United Kingdom

TL;DR: A thorough evaluation of the efficacy and sustainability of potential recontacting systems within the National Health Service would be necessary before deciding whether and how to implement such a service or to create guidelines on best-practice models.
Journal ArticleDOI

Translating personalized medicine using new genetic technologies in clinical practice: the ethical issues

TL;DR: The issues of informed consent, privacy, data ownership and technology regulation as they relate to the emerging field of personalized medicine and genomics are reviewed.
Journal ArticleDOI

Whole-exome sequencing in intellectual disability; cost before and after a diagnosis.

TL;DR: Application of WES results in a considerable reduction of healthcare costs, not just in current settings, but even more so when applied earlier in the diagnostic trajectory (genetics-first), and WES may replace less cost-effective traditional technologies without compromising the diagnostic yield.
References
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Journal ArticleDOI

A Map of Human Genome Variation From Population-Scale Sequencing

TL;DR: The 1000 Genomes Project aims to provide a deep characterization of human genome sequence variation as a foundation for investigating the relationship between genotype and phenotype as mentioned in this paper, and the results of the pilot phase of the project, designed to develop and compare different strategies for genomewide sequencing with high-throughput platforms.
Journal ArticleDOI

Exome sequencing identifies the cause of a Mendelian disorder

TL;DR: Exome sequencing of a small number of unrelated affected individuals is a powerful, efficient strategy for identifying the genes underlying rare mendelian disorders and will likely transform the genetic analysis of monogenic traits.
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