A
Alonzo Alfaro-Núñez
Researcher at Statens Serum Institut
Publications - 30
Citations - 3244
Alonzo Alfaro-Núñez is an academic researcher from Statens Serum Institut. The author has contributed to research in topics: Medicine & Phylogenetic tree. The author has an hindex of 11, co-authored 21 publications receiving 2567 citations. Previous affiliations of Alonzo Alfaro-Núñez include American Museum of Natural History & Escuela Superior Politecnica del Litoral.
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Journal ArticleDOI
Whole-genome analyses resolve early branches in the tree of life of modern birds
Erich D. Jarvis,Siavash Mirarab,Andre J. Aberer,Bo Li,Bo Li,Bo Li,Peter Houde,Cai Li,Cai Li,Simon Y. W. Ho,Brant C. Faircloth,Benoit Nabholz,Jason T. Howard,Alexander Suh,Claudia C. Weber,Rute R. da Fonseca,Jianwen Li,Fang Zhang Zhang,Hui Li,Long Zhou,Nitish Narula,Nitish Narula,Liang Liu,Ganesh Ganapathy,Bastien Boussau,Shamsuzzoha Bayzid,Volodymyr Zavidovych,Sankar Subramanian,Toni Gabaldón,Salvador Capella-Gutierrez,Jaime Huerta-Cepas,Bhanu Rekepalli,Bhanu Rekepalli,Kasper Munch,Mikkel H. Schierup,Bent E. K. Lindow,Wesley C. Warren,David A. Ray,Richard E. Green,Michael William Bruford,Xiangjiang Zhan,Xiangjiang Zhan,Andrew Dixon,Shengbin Li,Ning Li,Yinhua Huang,Elizabeth P. Derryberry,Elizabeth P. Derryberry,Mads F. Bertelsen,Frederick H. Sheldon,Robb T. Brumfield,Claudio V. Mello,Claudio V. Mello,Peter V. Lovell,Morgan Wirthlin,Maria Paula Cruz Schneider,Francisco Prosdocimi,José Alfredo Samaniego,Amhed Missael Vargas Velazquez,Alonzo Alfaro-Núñez,Paula F. Campos,Bent O. Petersen,Thomas Sicheritz-Pontén,An Pas,Thomas L. Bailey,R. Paul Scofield,Michael Bunce,David M. Lambert,Qi Zhou,Polina L. Perelman,Amy C. Driskell,Beth Shapiro,Zijun Xiong,Yongli Zeng,Shiping Liu,Zhenyu Li,Binghang Liu,Kui Wu,Jin Xiao,Xiong Yinqi,Quiemei Zheng,Yong Zhang,Huanming Yang,Jian Wang,Linnéa Smeds,Frank E. Rheindt,Michael J. Braun,Jon Fjeldså,Ludovic Orlando,F. Keith Barker,Knud A. Jønsson,Warren E. Johnson,Klaus-Peter Koepfli,Stephen J. O'Brien,David Haussler,Oliver A. Ryder,Carsten Rahbek,Eske Willerslev,Gary R. Graves,Gary R. Graves,Travis C. Glenn,John E. McCormack,Dave Burt,Hans Ellegren,Per Alström,Scott V. Edwards,Alexandros Stamatakis,David P. Mindell,Joel Cracraft,Edward L. Braun,Tandy Warnow,Tandy Warnow,Wang Jun,M. Thomas P. Gilbert,M. Thomas P. Gilbert,Guojie Zhang,Guojie Zhang +116 more
TL;DR: A genome-scale phylogenetic analysis of 48 species representing all orders of Neoaves recovered a highly resolved tree that confirms previously controversial sister or close relationships and identifies the first divergence in Neoaves, two groups the authors named Passerea and Columbea.
Journal ArticleDOI
Comparative genomics reveals insights into avian genome evolution and adaptation.
Guojie Zhang,Guojie Zhang,Cai Li,Qiye Li,Bo Li,Denis M. Larkin,Chul Hee Lee,Jay F. Storz,Agostinho Antunes,Matthew J. Greenwold,Robert W. Meredith,Anders Ödeen,Jie Cui,Qi Zhou,Luohao Xu,Hailin Pan,Zongji Wang,Lijun Jin,Pei Zhang,Haofu Hu,Wei Yang,Jiang Hu,Jin Xiao,Zhikai Yang,Yang Liu,Qiaolin Xie,Hao Yu,Jinmin Lian,Ping Wen,Fang Zhang,Hui Li,Yongli Zeng,Zijun Xiong,Shiping Liu,Long Zhou,Zhiyong Huang,Na An,Jie Wang,Qiumei Zheng,Yingqi Xiong,Guangbiao Wang,Bo Wang,Jingjing Wang,Yu Fan,Rute R. da Fonseca,Alonzo Alfaro-Núñez,Mikkel Schubert,Ludovic Orlando,Tobias Mourier,Jason T. Howard,Ganeshkumar Ganapathy,Andreas R. Pfenning,Osceola Whitney,Miriam V. Rivas,Erina Hara,Julia Smith,Marta Farré,Jitendra Narayan,Gancho T. Slavov,Michael N Romanov,Rui Borges,João Paulo Machado,Imran Khan,Mark S. Springer,John Gatesy,Federico G. Hoffmann,Juan C. Opazo,Olle Håstad,Roger H. Sawyer,Heebal Kim,Kyu-Won Kim,Hyeon Jeong Kim,Seoae Cho,Ning Li,Yinhua Huang,Michael William Bruford,Xiangjiang Zhan,Andrew Dixon,Mads F. Bertelsen,Elizabeth P. Derryberry,Wesley C. Warren,Richard K. Wilson,Shengbin Li,David A. Ray,Richard E. Green,Stephen J. O'Brien,Darren K. Griffin,Warren E. Johnson,David Haussler,Oliver A. Ryder,Eske Willerslev,Gary R. Graves,Per Alström,Jon Fjeldså,David P. Mindell,Scott V. Edwards,Edward L. Braun,Carsten Rahbek,David W. Burt,Peter Houde,Yong Zhang,Huanming Yang,Jian Wang,Erich D. Jarvis,M. Thomas P. Gilbert,M. Thomas P. Gilbert,Jun Wang +106 more
TL;DR: This work explored bird macroevolution using full genomes from 48 avian species representing all major extant clades to reveal that pan-avian genomic diversity covaries with adaptations to different lifestyles and convergent evolution of traits.
Journal ArticleDOI
SARS-CoV-2 Transmission between Mink (Neovison vison) and Humans, Denmark.
Anne Sofie Hammer,Michelle Lauge Quaade,Thomas Bruun Rasmussen,Thomas Bruun Rasmussen,Jannik Fonager,Morten Rasmussen,Karin Mundbjerg,Louise Lohse,Bertel Strandbygaard,Charlotte Sværke Jørgensen,Alonzo Alfaro-Núñez,Maiken Worsøe Rosenstierne,Anette Boklund,Tariq Hisham Beshara Halasa,Anders Fomsgaard,Graham J. Belsham,Anette Bøtner,Anette Bøtner +17 more
TL;DR: Full-length virus genome sequencing revealed novel virus variants in mink that subsequently appeared within the local human community.
Journal ArticleDOI
Marine turtle mitogenome phylogenetics and evolution.
Sebastián Duchêne,Amy Frey,Alonzo Alfaro-Núñez,Peter H. Dutton,M. Thomas P. Gilbert,Phillip A. Morin +5 more
TL;DR: Complete mitogenomes for all sea-turtle species are sequenced, showing strong support and resolution for phylogenetic relationships among all sea turtles, and phylogeographic patterns within globally-distributed species are revealed.
Journal ArticleDOI
Phylogenomic analyses data of the avian phylogenomics project.
Erich D. Jarvis,Siavash Mirarab,Andre J. Aberer,Bo Li,Bo Li,Peter Houde,Cai Li,Simon Y. W. Ho,Brant C. Faircloth,Brant C. Faircloth,Benoit Nabholz,Jason T. Howard,Alexander Suh,Claudia C. Weber,Rute R. da Fonseca,Alonzo Alfaro-Núñez,Nitish Narula,Nitish Narula,Liang Liu,Dave Burt,Hans Ellegren,Scott V. Edwards,Alexandros Stamatakis,Alexandros Stamatakis,David P. Mindell,Joel Cracraft,Edward L. Braun,Tandy Warnow,Wang Jun,M. Thomas P. Gilbert,M. Thomas P. Gilbert,Guojie Zhang +31 more
TL;DR: The Avian Phylogenomics Project is the largest vertebrate phylogenomics project to date and the sequence, alignment, and tree data are expected to accelerate analyses in phylogenomics and other related areas.