A
Anna Edlund
Researcher at J. Craig Venter Institute
Publications - 73
Citations - 5840
Anna Edlund is an academic researcher from J. Craig Venter Institute. The author has contributed to research in topics: Oral Microbiome & Insulin. The author has an hindex of 28, co-authored 68 publications receiving 4038 citations. Previous affiliations of Anna Edlund include Malmö University & Stockholm University.
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Journal ArticleDOI
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
Mingxun Wang,Jeremy Carver,Vanessa V. Phelan,Laura M. Sanchez,Neha Garg,Yao Peng,Don D. Nguyen,Jeramie D. Watrous,Clifford A. Kapono,Tal Luzzatto-Knaan,Carla Porto,Amina Bouslimani,Alexey V. Melnik,Michael J. Meehan,Wei-Ting Liu,Max Crüsemann,Paul D. Boudreau,Eduardo Esquenazi,Mario Sandoval-Calderón,Roland D. Kersten,Laura A. Pace,Robert A. Quinn,Katherine R. Duncan,Cheng-Chih Hsu,Dimitrios J. Floros,Ronnie G. Gavilan,Karin Kleigrewe,Trent R. Northen,Rachel J. Dutton,Delphine Parrot,Erin E. Carlson,Bertrand Aigle,Charlotte Frydenlund Michelsen,Lars Jelsbak,Christian Sohlenkamp,Pavel A. Pevzner,Anna Edlund,Anna Edlund,Jeffrey S. McLean,Jeffrey S. McLean,Jörn Piel,Brian T. Murphy,Lena Gerwick,Chih-Chuang Liaw,Yu-Liang Yang,Hans-Ulrich Humpf,Maria Maansson,Robert A. Keyzers,Amy C. Sims,Andrew R. Johnson,Ashley M. Sidebottom,Brian E. Sedio,Andreas Klitgaard,Charles B. Larson,Charles B. Larson,Cristopher A. Boya P.,Daniel Torres-Mendoza,David Gonzalez,Denise Brentan Silva,Denise Brentan Silva,Lucas Miranda Marques,Daniel P. Demarque,Egle Pociute,Ellis C. O’Neill,Enora Briand,Enora Briand,Eric J. N. Helfrich,Eve A. Granatosky,Evgenia Glukhov,Florian Ryffel,Hailey Houson,Hosein Mohimani,Jenan J. Kharbush,Yi Zeng,Julia A. Vorholt,Kenji L. Kurita,Pep Charusanti,Kerry L. McPhail,Kristian Fog Nielsen,Lisa Vuong,Maryam Elfeki,Matthew F. Traxler,Niclas Engene,Nobuhiro Koyama,Oliver B. Vining,Ralph S. Baric,Ricardo Pianta Rodrigues da Silva,Samantha J. Mascuch,Sophie Tomasi,Stefan Jenkins,Venkat R. Macherla,Thomas Hoffman,Vinayak Agarwal,Philip G. Williams,Jingqui Dai,Ram P. Neupane,Joshua R. Gurr,Andrés M. C. Rodríguez,Anne Lamsa,Chen Zhang,Kathleen Dorrestein,Brendan M. Duggan,Jehad Almaliti,Pierre-Marie Allard,Prasad Phapale,Louis-Félix Nothias,Theodore Alexandrov,Marc Litaudon,Jean-Luc Wolfender,Jennifer E. Kyle,Thomas O. Metz,Tyler Peryea,Dac-Trung Nguyen,Danielle VanLeer,Paul Shinn,Ajit Jadhav,Rolf Müller,Katrina M. Waters,Wenyuan Shi,Xueting Liu,Lixin Zhang,Rob Knight,Paul R. Jensen,Bernhard O. Palsson,Kit Pogliano,Roger G. Linington,Marcelino Gutiérrez,Norberto Peporine Lopes,William H. Gerwick,William H. Gerwick,Bradley S. Moore,Bradley S. Moore,Pieter C. Dorrestein,Pieter C. Dorrestein,Nuno Bandeira,Nuno Bandeira +135 more
TL;DR: In GNPS, crowdsourced curation of freely available community-wide reference MS libraries will underpin improved annotations and data-driven social-networking should facilitate identification of spectra and foster collaborations.
Journal ArticleDOI
Establishing microbial composition measurement standards with reference frames
James T. Morton,Clarisse Marotz,Alex D. Washburne,Justin D. Silverman,Livia S. Zaramela,Anna Edlund,Karsten Zengler,Rob Knight +7 more
TL;DR: The notion of “reference frames” is defined, which provide deep intuition about the compositional nature of microbiome data, which allow reassessment of published relative abundance data to reveal reproducible microbial changes from standard sequencing output without the need for new assays.
Journal ArticleDOI
Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle
Xuesong He,Jeffrey S. McLean,Jeffrey S. McLean,Anna Edlund,Shibu Yooseph,Adam P. Hall,Su-Yang Liu,Pieter C. Dorrestein,Eduardo Esquenazi,Ryan C. Hunter,Genhong Cheng,Karen E. Nelson,Renate Lux,Wenyuan Shi +13 more
TL;DR: This first completed genome for a human-associated TM7 phylotype revealed a complete lack of amino acid biosynthetic capacity, and comparative genomics analyses with uncultivated environmental TM7 assemblies show remarkable conserved gene synteny and only minimal gene loss/gain that may have occurred as TM7x adapted to conditions within the human host.
Journal ArticleDOI
Reduced Insulin Exocytosis in Human Pancreatic β-Cells With Gene Variants Linked to Type 2 Diabetes
Anders Rosengren,Matthias Braun,Taman Mahdi,Sofia A Andersson,Mary E. Travers,Makoto Shigeto,Enming Zhang,Peter Almgren,Claes Ladenvall,Annika S. Axelsson,Anna Edlund,Morten Gram Pedersen,Anna Jonsson,Reshma Ramracheya,Yunzhao Tang,Jonathan N. Walker,Amy Barrett,Paul Johnson,Valeriya Lyssenko,Mark I. McCarthy,Leif Groop,Albert Salehi,Anna L. Gloyn,Erik Renström,Patrik Rorsman,Lena Eliasson +25 more
TL;DR: A novel genetic risk score for β-cell dysfunction is created that includes aberrant granule docking, decreased Ca2+ sensitivity of exocytosis, and reduced insulin release in type 2 diabetes patients with a high risk score.
Journal ArticleDOI
Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum
Jeffrey S. McLean,Jeffrey S. McLean,Mary-Jane Lombardo,Jonathan H. Badger,Anna Edlund,Mark Novotny,Joyclyn Yee-Greenbaum,Nikolay Vyahhi,Adam P. Hall,Youngik Yang,Christopher L. Dupont,Michael G. Ziegler,Hamidreza Chitsaz,Andrew E. Allen,Shibu Yooseph,Glenn Tesler,Pavel A. Pevzner,Pavel A. Pevzner,Robert Friedman,Kenneth H. Nealson,Kenneth H. Nealson,J. Craig Venter,Roger S. Lasken +22 more
TL;DR: An approach for increasing throughput and effectively improving the likelihood of sampling rare events based on forming small random pools of single-flow–sorted cells, amplifying their DNA by multiple displacement amplification and sequencing all cells in the pool, creating a “mini-metagenome” is developed.