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Open AccessJournal ArticleDOI

Activating ESR1 mutations in hormone-resistant metastatic breast cancer

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TLDR
Five new LBD-localized ESR1 mutations identified here were shown to result in constitutive activity and continued responsiveness to anti-estrogen therapies in vitro, suggesting that activating mutations in E SR1 are a key mechanism in acquired endocrine resistance in breast cancer therapy.
Abstract
Arul Chinnaiyan and colleagues report the results of prospective clinical sequencing of 11 estrogen receptor–positive metastatic breast cancers. They identify ESR1 mutations affecting the ligand-binding domain in six hormone-resistant metastatic breast cancers and show that the mutant estrogen receptors are constitutively active and continue to be responsive to anti-estrogen therapies in vitro. Breast cancer is the most prevalent cancer in women, and over two-thirds of cases express estrogen receptor-α (ER-α, encoded by ESR1). Through a prospective clinical sequencing program for advanced cancers, we enrolled 11 patients with ER-positive metastatic breast cancer. Whole-exome and transcriptome analysis showed that six cases harbored mutations of ESR1 affecting its ligand-binding domain (LBD), all of whom had been treated with anti-estrogens and estrogen deprivation therapies. A survey of The Cancer Genome Atlas (TCGA) identified four endometrial cancers with similar mutations of ESR1. The five new LBD-localized ESR1 mutations identified here (encoding p.Leu536Gln, p.Tyr537Ser, p.Tyr537Cys, p.Tyr537Asn and p.Asp538Gly) were shown to result in constitutive activity and continued responsiveness to anti-estrogen therapies in vitro. Taken together, these studies suggest that activating mutations in ESR1 are a key mechanism in acquired endocrine resistance in breast cancer therapy.

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Journal ArticleDOI

Pi3k/akt/mtor: вклад в формирование фенотипа опухоли, чувствительного к тамоксифену

TL;DR: The results of studies of the main components of the cascade as molecular markers of response to tamoxifen therapy in estrogen‑positive BC patients are presented and further study of the PI3K/Akt/mTOR crosstalk with various signaling pathways will contribute to both the understanding of carcino‑ genesis and the development of new molecular‑targeted anticancer drugs for the treatment of tamoxIFen‑ resistant breast tumors.
Book ChapterDOI

Role of Ancillary Tests in Breast Fine Needle Aspiration Biopsy Cytopathology

TL;DR: The complexity of the many challenges traditionally associated with the application of ancillary techniques to FNAB of the breast are elucidated to provide insights into some of the most cutting-edge and clinical useful application scenarios.
Book ChapterDOI

Molecular Classification of Breast Cancer

TL;DR: The main molecular features of the intrinsic molecular subtypes of breast cancer and how the combination of standard clinical–pathological markers with the information provided by these molecular entities might help further understand the biological complexity of this disease, increase the efficacy of current and novel therapies, and ultimately improve outcomes for breast cancer patients are described.
Posted ContentDOI

Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer

TL;DR: Using a unique CRISPR/Cas9 strategy, the D538G mutation is introduced, a common endometrial cancer mutation that alters the ligand binding domain of ESR1, while epitope tagging the endogenous locus, and discovered estrogen-independent mutant E SR1 genomic binding that is significantly altered from wildtype ESR2.
References
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TL;DR: SAMtools as discussed by the authors implements various utilities for post-processing alignments in the SAM format, such as indexing, variant caller and alignment viewer, and thus provides universal tools for processing read alignments.
Journal ArticleDOI

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

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Journal ArticleDOI

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TL;DR: The ANNOVAR tool to annotate single nucleotide variants and insertions/deletions, such as examining their functional consequence on genes, inferring cytogenetic bands, reporting functional importance scores, finding variants in conserved regions, or identifying variants reported in the 1000 Genomes Project and dbSNP is developed.
Journal ArticleDOI

Comprehensive molecular portraits of human breast tumours

Daniel C. Koboldt, +355 more
- 04 Oct 2012 - 
TL;DR: The ability to integrate information across platforms provided key insights into previously defined gene expression subtypes and demonstrated the existence of four main breast cancer classes when combining data from five platforms, each of which shows significant molecular heterogeneity.
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