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Open AccessJournal ArticleDOI

Neuronal activity modifies the DNA methylation landscape in the adult brain

TLDR
This study quantitatively compared the CpG methylation landscape of adult mouse dentate granule neurons in vivo before and after synchronous neuronal activation, and implicates modification of the neuronal DNA methylome as a previously underappreciated mechanism for activity-dependent epigenetic regulation in the adult nervous system.
Abstract
It has been unclear how extensively neuronal DNA methylome is regulated by activity. In this resource article, the authors use next-generation sequencing methods and quantitatively compare the CpG methylation landscape of adult mouse dentate granule neurons in vivo before and after synchronous neuronal activation.

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Citations
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Journal ArticleDOI

DNA Methylation and Its Basic Function

TL;DR: The investigation into DNA methylation continues to show a rich and complex picture about epigenetic gene regulation in the central nervous system and provides possible therapeutic targets for the treatment of neuropsychiatric disorders.
Journal ArticleDOI

TET-mediated active DNA demethylation: mechanism, function and beyond

TL;DR: Recent advances in biochemical and structural studies have revealed mechanistic insights into how TET and TDG mediate active DNA demethylation and many regulatory mechanisms of this process have been identified.
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Adult Neurogenesis in the Hippocampus: From Stem Cells to Behavior

TL;DR: The molecular machinery involved in the generation of new neurons from a pool of adult neural stem cells and their integration into functional hippocampal circuits is discussed.
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Distribution, recognition and regulation of non-CpG methylation in the adult mammalian brain

TL;DR: The characteristics of CpH methylation suggest that a substantially expanded proportion of the neuronal genome is under cytosine methylation regulation and provide a new foundation for understanding the role of this key epigenetic modification in the nervous system.
References
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Journal ArticleDOI

Epigenetic programming by maternal behavior.

TL;DR: It is shown that an epigenomic state of a gene can be established through behavioral programming, and it is potentially reversible, suggesting a causal relation among epigenomicState, GR expression and the maternal effect on stress responses in the offspring.
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Human DNA methylomes at base resolution show widespread epigenomic differences

TL;DR: The first genome-wide, single-base-resolution maps of methylated cytosines in a mammalian genome, from both human embryonic stem cells and fetal fibroblasts, along with comparative analysis of messenger RNA and small RNA components of the transcriptome, several histone modifications, and sites of DNA-protein interaction for several key regulatory factors were presented in this article.
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Gene Silencing in Cancer in Association with Promoter Hypermethylation

TL;DR: The mechanisms of gene silencing in cancer and clinical applications of this phenomenon are reviewed, especially tumor-suppressor genes.
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Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse

TL;DR: Findings translate previous results from rat to humans and suggest a common effect of parental care on the epigenetic regulation of hippocampal glucocorticoid receptor expression.
Journal ArticleDOI

DNA methylation landscapes: provocative insights from epigenomics

TL;DR: The conventional view that DNA methylation functions predominantly to irreversibly silence transcription is being challenged and not only is promoter methylation often highly dynamic during development, but many organisms also seem to targetDNA methylation specifically to the bodies of active genes.
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