J
Jonathan D. Rosen
Researcher at University of North Carolina at Chapel Hill
Publications - 25
Citations - 1158
Jonathan D. Rosen is an academic researcher from University of North Carolina at Chapel Hill. The author has contributed to research in topics: Genome-wide association study & Biology. The author has an hindex of 8, co-authored 18 publications receiving 412 citations.
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Journal ArticleDOI
The polygenic and monogenic basis of blood traits and diseases
Dragana Vuckovic,Erik L. Bao,Parsa Akbari,Caleb A. Lareau,Abdou Mousas,Tao Jiang,Ming-Huei Chen,Laura M. Raffield,Manuel Tardaguila,Jennifer E. Huffman,Scott C. Ritchie,Karyn Megy,Hannes Ponstingl,Christopher J. Penkett,Patrick K. Albers,Emilie M. Wigdor,Saori Sakaue,Arden Moscati,Regina Manansala,Ken Sin Lo,Huijun Qian,Masato Akiyama,Traci M. Bartz,Yoav Ben-Shlomo,Andrew D Beswick,Jette Bork-Jensen,Erwin P. Bottinger,Jennifer A. Brody,Frank J. A. van Rooij,Kumaraswamy Naidu Chitrala,Peter W.F. Wilson,Hélène Choquet,John Danesh,Emanuele Di Angelantonio,Niki Dimou,Jingzhong Ding,Paul Elliott,Tõnu Esko,Michele K. Evans,Stephan B. Felix,James S. Floyd,Linda Broer,Niels Grarup,Michael H. Guo,Qi Guo,Andreas Greinacher,Jeffrey Haessler,Torben Hansen,J. M. M. Howson,Wei Huang,Eric Jorgenson,Tim Kacprowski,Mika Kähönen,Yoichiro Kamatani,Masahiro Kanai,Savita Karthikeyan,Fotios Koskeridis,Leslie A. Lange,Terho Lehtimäki,Allan Linneberg,Yongmei Liu,Leo-Pekka Lyytikäinen,Ani Manichaikul,Koichi Matsuda,Karen L. Mohlke,Nina Mononen,Yoshinori Murakami,Girish N. Nadkarni,Kjell Nikus,Nathan Pankratz,Oluf Pedersen,Michael Preuss,Bruce M. Psaty,Olli T. Raitakari,Stephen S. Rich,Benjamin Rodriguez,Jonathan D. Rosen,Jerome I. Rotter,Petra Schubert,Cassandra N. Spracklen,Praveen Surendran,Hua Tang,Jean-Claude Tardif,Mohsen Ghanbari,Uwe Völker,Henry Völzke,Nicholas A. Watkins,Stefan Weiss,VA Million Veteran Program,Na Cai,Kousik Kundu,Stephen B. Watt,Klaudia Walter,Alan B. Zonderman,Kelly Cho,Yun Li,Ruth J. F. Loos,Julian C. Knight,Michel Georges,Oliver Stegle,Evangelos Evangelou,Yukinori Okada,David J. Roberts,Michael Inouye,Andrew D. Johnson,Paul L. Auer,William J. Astle,Alexander P. Reiner,Adam S. Butterworth,Willem H. Ouwehand,Guillaume Lettre,Vijay G. Sankaran,Vijay G. Sankaran,Nicole Soranzo +113 more
TL;DR: The results show the power of large-scale blood cell trait GWAS to interrogate clinically meaningful variants across a wide allelic spectrum of human variation.
Journal ArticleDOI
Trans-ethnic and Ancestry-Specific Blood-Cell Genetics in 746,667 Individuals from 5 Global Populations.
Ming-Huei Chen,Laura M. Raffield,Abdou Mousas,Saori Sakaue,Jennifer E. Huffman,Arden Moscati,Bhavi Trivedi,Tao Jiang,Parsa Akbari,Dragana Vuckovic,Erik L. Bao,Xue Zhong,Regina Manansala,Véronique Laplante,Minhui Chen,Ken Sin Lo,Huijun Qian,Caleb A. Lareau,Mélissa Beaudoin,Karen A. Hunt,Masato Akiyama,Traci M. Bartz,Yoav Ben-Shlomo,Andrew D Beswick,Jette Bork-Jensen,Erwin P. Bottinger,Jennifer A. Brody,Frank J. A. van Rooij,Kumaraswamynaidu Chitrala,Kelly Cho,Hélène Choquet,Adolfo Correa,John Danesh,Emanuele Di Angelantonio,Niki Dimou,Jingzhong Ding,Paul Elliott,Tõnu Esko,Michele K. Evans,James S. Floyd,Linda Broer,Niels Grarup,Michael H. Guo,Andreas Greinacher,Jeffrey Haessler,Torben Hansen,Joanna M. M. Howson,Qin Qin Huang,Wei Huang,Eric Jorgenson,Tim Kacprowski,Mika Kähönen,Yoichiro Kamatani,Masahiro Kanai,Savita Karthikeyan,Fotis Koskeridis,Leslie A. Lange,Terho Lehtimäki,Markus M. Lerch,Allan Linneberg,Yongmei Liu,Leo-Pekka Lyytikäinen,Ani Manichaikul,Hilary C. Martin,Koichi Matsuda,Karen L. Mohlke,Nina Mononen,Yoshinori Murakami,Girish N. Nadkarni,Matthias Nauck,Kjell Nikus,Willem H. Ouwehand,Nathan Pankratz,Oluf Pedersen,Michael Preuss,Bruce M. Psaty,Olli T. Raitakari,David J. Roberts,Stephen S. Rich,Benjamin Rodriguez,Jonathan D. Rosen,Jerome I. Rotter,Petra Schubert,Cassandra N. Spracklen,Praveen Surendran,Hua Tang,Jean-Claude Tardif,Richard C. Trembath,Mohsen Ghanbari,Uwe Völker,Henry Völzke,Nicholas A. Watkins,Alan B. Zonderman,VA Million Veteran Program,Peter W.F. Wilson,Yun Li,Adam S. Butterworth,Jean-François Gauchat,Charleston W. K. Chiang,Bingshan Li,Ruth J. F. Loos,William J. Astle,Evangelos Evangelou,David A. van Heel,Vijay G. Sankaran,Yukinori Okada,Nicole Soranzo,Andrew D. Johnson,Alexander P. Reiner,Paul L. Auer,Guillaume Lettre,Guillaume Lettre +111 more
TL;DR: The clinical significance and predictive value of trans-ethnic variants in multiple populations are explored, genetic architecture and the effect of natural selection on these blood phenotypes between populations are compared and the value of a more global representation of populations in genetic studies is highlighted.
Journal ArticleDOI
Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations
Madeline H. Kowalski,Huijun Qian,Ziyi Hou,Jonathan D. Rosen,Amanda L. Tapia,Yue Shan,Deepti Jain,Maria Argos,Donna K. Arnett,Christy L. Avery,Kathleen C. Barnes,Lewis C. Becker,Stephanie A. Bien,Joshua C. Bis,John Blangero,Eric Boerwinkle,Donald W. Bowden,Steve Buyske,Jianwen Cai,Michael H. Cho,Michael H. Cho,Seung Hoan Choi,Hélène Choquet,L. Adrienne Cupples,Mary Cushman,Michelle Daya,Paul S. de Vries,Patrick T. Ellinor,Patrick T. Ellinor,Nauder Faraday,Myriam Fornage,Stacey Gabriel,Santhi K. Ganesh,Misa Graff,Namrata Gupta,Jiang He,Susan R. Heckbert,Susan R. Heckbert,Bertha Hidalgo,Chani J. Hodonsky,Marguerite R. Irvin,Andrew D. Johnson,Eric Jorgenson,Robert C. Kaplan,Sharon L.R. Kardia,Tanika N. Kelly,Charles Kooperberg,Jessica Lasky-Su,Jessica Lasky-Su,Ruth J. F. Loos,Steven A. Lubitz,Steven A. Lubitz,Rasika A. Mathias,Caitlin P. McHugh,Courtney G. Montgomery,Jee-Young Moon,Alanna C. Morrison,Nicholette D. Palmer,Nathan Pankratz,George Papanicolaou,Juan M. Peralta,Patricia A. Peyser,Stephen S. Rich,Jerome I. Rotter,Edwin K. Silverman,Edwin K. Silverman,Jennifer A. Smith,Nicholas L. Smith,Nicholas L. Smith,Nicholas L. Smith,Kent D. Taylor,Timothy A. Thornton,Hemant K. Tiwari,Russell P. Tracy,Tao Wang,Scott T. Weiss,Scott T. Weiss,Lu-Chen Weng,Kerri L. Wiggins,James G. Wilson,Lisa R. Yanek,Sebastian Zöllner,Kari E. North,Paul L. Auer,Laura M. Raffield,Alex P. Reiner,Yun Li +86 more
TL;DR: It is demonstrated that using TOPMed sequencing data as the imputation reference panel improves genotypes into admixed African and Hispanic/Latino samples with genome-wide genotyping array data, which subsequently enhanced gene-mapping power for complex traits.
Posted ContentDOI
The Polygenic and Monogenic Basis of Blood Traits and Diseases
Dragana Vuckovic,Dragana Vuckovic,Erik L. Bao,Erik L. Bao,Parsa Akbari,Caleb A. Lareau,Caleb A. Lareau,Abdou Mousas,Tao Jiang,Tao Jiang,Ming-Huei Chen,Laura M. Raffield,Manuel Tardaguila,Jennifer E. Huffman,Scott C. Ritchie,Karyn Megy,Karyn Megy,Karyn Megy,Hannes Ponstingl,Christopher J. Penkett,Christopher J. Penkett,Patrick K. Albers,Emilie M. Wigdor,Saori Sakaue,Arden Moscati,Regina Manansala,Ken Sin Lo,Huijun Qian,Masato Akiyama,Traci M. Bartz,Yoav Ben-Shlomo,Andrew D Beswick,Jette Bork-Jensen,Erwin P. Bottinger,Erwin P. Bottinger,Jennifer A. Brody,Frank J. A. van Rooij,Kumaraswamy Naidu Chitrala,Kelly Cho,Kelly Cho,Kelly Cho,Hélène Choquet,Adolfo Correa,John Danesh,Emanuele Di Angelantonio,Niki Dimou,Niki Dimou,Jingzhong Ding,Paul Elliott,Tõnu Esko,Michele K. Evans,Stephan B. Felix,James S. Floyd,Linda Broer,Niels Grarup,Michael H. Guo,Michael H. Guo,Andreas Greinacher,Jeffrey Haessler,Torben Hansen,Joanna M. M. Howson,Joanna M. M. Howson,Wei Huang,Eric Jorgenson,Tim Kacprowski,Tim Kacprowski,Mika Kähönen,Yoichiro Kamatani,Masahiro Kanai,Savita Karthikeyan,Fotis Koskeridis,Leslie A. Lange,Terho Lehtimäki,Allan Linneberg,Allan Linneberg,Yongmei Liu,Leo-Pekka Lyytikäinen,Ani Manichaikul,Koichi Matsuda,Karen L. Mohlke,Nina Mononen,Yoshinori Murakami,Girish N. Nadkarni,Kjell Nikus,Nathan Pankratz,Oluf Pedersen,Michael Preuss,Bruce M. Psaty,Olli T. Raitakari,Olli T. Raitakari,Stephen S. Rich,Benjamin Rodriguez,Jonathan D. Rosen,Jerome I. Rotter,Petra Schubert,Cassandra N. Spracklen,Praveen Surendran,Hua Tang,Jean-Claude Tardif,Jean-Claude Tardif,Mohsen Ghanbari,Uwe Völker,Henry Völzke,Nicholas A. Watkins,Stefan Weiss,VA Million Veteran Program,Na Cai,Kousik Kundu,Stephen B. Watt,Klaudia Walter,Alan B. Zonderman,Peter W.F. Wilson,Yun Li,Ruth J. F. Loos,Julian C. Knight,Michel Georges,Oliver Stegle,Evangelos Evangelou,Evangelos Evangelou,Yukinori Okada,David J. Roberts,David J. Roberts,Michael Inouye,Andrew D. Johnson,Paul L. Auer,William J. Astle,William J. Astle,Alexander P. Reiner,Adam S. Butterworth,Willem H. Ouwehand,Guillaume Lettre,Guillaume Lettre,Vijay G. Sankaran,Vijay G. Sankaran,Nicole Soranzo,Nicole Soranzo +135 more
TL;DR: These results show the power of large-scale blood cell GWAS to interrogate clinically meaningful variants across the full allelic spectrum of human variation.
Journal ArticleDOI
Cell type-specific 3D epigenomes in the developing human cortex
Michael Song,Mark-Phillip Pebworth,Xiaoyu Yang,Armen Abnousi,Changxu Fan,Jia Wen,Jonathan D. Rosen,Mayank N. K. Choudhary,Xiekui Cui,Ian Jones,Seth Bergenholtz,Ugomma C. Eze,Ivan Juric,Bingkun Li,Lenka Maliskova,Jerry Lee,Weifang Liu,Alex A. Pollen,Yun Li,Ting Wang,Ming Hu,Arnold R. Kriegstein,Yin Shen +22 more
TL;DR: It is shown that chromatin interactions underlie several aspects of gene regulation, with transposable elements and disease-associated variants enriched at distal interacting regions in a cell-type-specific manner.