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Xiaowen Lu
Researcher at Wageningen University and Research Centre
Publications - 12
Citations - 2068
Xiaowen Lu is an academic researcher from Wageningen University and Research Centre. The author has contributed to research in topics: Gene & Gene expression. The author has an hindex of 9, co-authored 10 publications receiving 1801 citations. Previous affiliations of Xiaowen Lu include University Medical Center Groningen & Shanghai Jiao Tong University.
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Journal ArticleDOI
antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification.
Kai Blin,Thomas Wolf,Marc G. Chevrette,Xiaowen Lu,Christopher J. Schwalen,Satria A. Kautsar,Hernando G. Suarez Duran,Emmanuel L. C. de los Santos,Hyun Uk Kim,Mariana Nave,Jeroen S. Dickschat,Douglas A. Mitchell,Ekaterina Shelest,Rainer Breitling,Eriko Takano,Sang Yup Lee,Tilmann Weber,Marnix H. Medema +17 more
TL;DR: The thoroughly updated antiSMASH version 4 is presented, which adds several novel features, including prediction of gene cluster boundaries using the ClusterFinder method or the newly integrated CASSIS algorithm, improved substrate specificity prediction for non-ribosomal peptide synthetase adenylation domains based on the new SANDPUMA algorithm, and several usability features have been updated and improved.
Journal ArticleDOI
Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure
Louise V. Wain,Germaine C. Verwoert,Paul F. O'Reilly,Gang Shi,Toby Johnson,Andrew D. Johnson,Murielle Bochud,Kenneth Rice,Peter Henneman,Albert V. Smith,Georg Ehret,Georg Ehret,Georg Ehret,Najaf Amin,Martin G. Larson,Martin G. Larson,Vincent Mooser,David Hadley,David Hadley,Marcus Doerr,Joshua C. Bis,Thor Aspelund,Tõnu Esko,A. Cecile J.W. Janssens,Jing Hua Zhao,Simon Heath,Maris Laan,Jingyuan Fu,Giorgio Pistis,Jian'an Luan,Pankaj Arora,Gavin Lucas,Nicola Pirastu,Irene Pichler,Anne U. Jackson,Rebecca J. Webster,Feng Zhang,John F. Peden,Helena Schmidt,Toshiko Tanaka,Harry Campbell,Wilmar Igl,Yuri Milaneschi,Jouke-Jan Hottenga,Veronique Vitart,Daniel I. Chasman,Stella Trompet,Jennifer L. Bragg-Gresham,Behrooz Z. Alizadeh,John C. Chambers,John C. Chambers,Xiuqing Guo,Terho Lehtimäki,Brigitte Kuehnel,Lorna M. Lopez,Ozren Polasek,Mladen Boban,Christopher P. Nelson,Alanna C. Morrison,Vasyl Pihur,Santhi K. Ganesh,Albert Hofman,Suman Kundu,Francesco U.S. Mattace-Raso,Fernando Rivadeneira,Eric J.G. Sijbrands,André G. Uitterlinden,Shih-Jen Hwang,Ramachandran S. Vasan,Thomas J. Wang,Sven Bergmann,Peter Vollenweider,Gérard Waeber,Jaana Laitinen,Anneli Pouta,Paavo Zitting,Wendy L. McArdle,Heyo K. Kroemer,Uwe Voelker,Henry Voelzke,Nicole L. Glazer,Kent D. Taylor,Tamara B. Harris,Helene Alavere,Toomas Haller,Aime Keis,Mari-Liis Tammesoo,Yurii S. Aulchenko,Inês Barroso,Kay-Tee Khaw,Pilar Galan,Serge Hercberg,Mark Lathrop,Susana Eyheramendy,Elin Org,Siim Sõber,Xiaowen Lu,Ilja M. Nolte,Brenda W.J.H. Penninx,Tanguy Corre,Corrado Masciullo,Cinzia Sala,Leif Groop,Benjamin F. Voight,Olle Melander,Christopher J. O'Donnell,Veikko Salomaa,Adamo Pio D'Adamo,Antonella Fabretto,Flavio Faletra,Sheila Ulivi,Fabiola M. Del Greco,Maurizio F. Facheris,Francis S. Collins,Richard N. Bergman,John Beilby,Joseph Hung,A. William Musk,Massimo Mangino,So-Youn Shin,Nicole Soranzo,Hugh Watkins,Anuj Goel,Anders Hamsten,Pierre Gider,Marisa Loitfelder,Marion Zeginigg,Dena G. Hernandez,Samer S. Najjar,Pau Navarro,Sarah H. Wild,Anna Maria Corsi,Andrew B. Singleton,Eco J. C. de Geus,Gonneke Willemsen,Alex Parker,Lynda M. Rose,Brendan M. Buckley,David J. Stott,Marco Orru,Manuela Uda,Melanie M. van der Klauw,Weihua Zhang,Xinzhong Li,James Scott,Yii-Der Ida Chen,Gregory L. Burke,Mika Kähönen,Jorma Viikari,Angela Doering,Thomas Meitinger,Gail Davies,John M. Starr,Valur Emilsson,Andrew S. Plump,Jan H.N. Lindeman,Peter A C 't Hoen,Inke R. Koenig,Janine F. Felix,Robert Clarke,Jemma C. Hopewell,Halit Ongen,Monique M.B. Breteler,Stéphanie Debette,Anita L. DeStefano,Myriam Fornage,Gary F. Mitchell,Nicholas L. Smith,Hilma Holm,Kari Stefansson,Gudmar Thorleifsson,Unnur Thorsteinsdottir,Nilesh J. Samani,Michael Preuss,Igor Rudan,Caroline Hayward,Ian J. Deary,H-Erich Wichmann,Olli T. Raitakari,Walter Palmas,Jaspal S. Kooner,Jaspal S. Kooner,Ronald P. Stolk,J. Wouter Jukema,Alan F. Wright,Dorret I. Boomsma,Stefania Bandinelli,Ulf Gyllensten,James F. Wilson,Luigi Ferrucci,Reinhold Schmidt,Martin Farrall,Tim D. Spector,Lyle J. Palmer,Jaakko Tuomilehto,Arne Pfeufer,Paolo Gasparini,David S. Siscovick,David Altshuler,Ruth J. F. Loos,Daniela Toniolo,Harold Snieder,Christian Gieger,Pierre Meneton,Nicholas J. Wareham,Ben A. Oostra,Andres Metspalu,Lenore J. Launer,Rainer Rettig,David P. Strachan,Jacques S. Beckmann,Jacqueline C. M. Witteman,Jeanette Erdmann,Ko Willems van Dijk,Eric Boerwinkle,Michael Boehnke,Paul M. Ridker,Marjo-Riitta Järvelin,Aravinda Chakravarti,Gonçalo R. Abecasis,Vilmundur Gudnason,Christopher Newton-Cheh,Daniel Levy,Patricia B. Munroe,Bruce M. Psaty,Mark J. Caulfield,Dabeeru C. Rao,Martin D. Tobin,Paul Elliott,Cornelia M. van Duijn +229 more
TL;DR: Findings suggest new genetic pathways underlying blood pressure variation, some of which may differentially influence SBP and DBP, as well as two new MAP loci associated with both of these traits.
Journal ArticleDOI
Common variants in 22 loci are associated with QRS duration and cardiac ventricular conduction.
Nona Sotoodehnia,Aaron Isaacs,Paul I.W. de Bakker,Marcus Dörr,Christopher Newton-Cheh,Christopher Newton-Cheh,Ilja M. Nolte,Pim van der Harst,Martina Müller,Mark Eijgelsheim,Alvaro Alonso,Andrew A. Hicks,Sandosh Padmanabhan,Caroline Hayward,Albert V. Smith,Ozren Polasek,Steven Giovannone,Jingyuan Fu,Jared W. Magnani,Jared W. Magnani,Kristin D. Marciante,Arne Pfeufer,Arne Pfeufer,Sina A. Gharib,Alexander Teumer,Man Li,Joshua C. Bis,Fernando Rivadeneira,Thor Aspelund,Anna Köttgen,Toby Johnson,Kenneth Rice,Mark P.S. Sie,Ying A. Wang,Ying A. Wang,Norman Klopp,Christian Fuchsberger,Sarah H. Wild,Irene Mateo Leach,Karol Estrada,Uwe Völker,Alan F. Wright,Folkert W. Asselbergs,Folkert W. Asselbergs,Jiaxiang Qu,Aravinda Chakravarti,Moritz F. Sinner,Jan A. Kors,Astrid Petersmann,Tamara B. Harris,Elsayed Z. Soliman,Patricia B. Munroe,Bruce M. Psaty,Ben A. Oostra,L. Adrienne Cupples,L. Adrienne Cupples,Siegfried Perz,Rudolf A. de Boer,André G. Uitterlinden,Henry Völzke,Tim D. Spector,Fangyu Liu,Eric Boerwinkle,Anna F. Dominiczak,Jerome I. Rotter,Gé van Herpen,Daniel Levy,H-Erich Wichmann,Wiek H. van Gilst,Jacqueline C.M. Witteman,Heyo K. Kroemer,W. H. Linda Kao,Susan R. Heckbert,Susan R. Heckbert,Thomas Meitinger,Albert Hofman,Harry Campbell,Aaron R. Folsom,Dirk J. van Veldhuisen,Christine Schwienbacher,Christine Schwienbacher,Christopher J. O'Donnell,Claudia B. Volpato,Mark J. Caulfield,John M. C. Connell,Lenore J. Launer,Xiaowen Lu,Lude Franke,Lude Franke,Rudolf S N Fehrmann,Gerard J. te Meerman,Harry J.M. Groen,Rinse K. Weersma,Leonard H. van den Berg,Cisca Wijmenga,Roel A. Ophoff,Roel A. Ophoff,Gerjan Navis,Igor Rudan,Igor Rudan,Harold Snieder,Harold Snieder,James F. Wilson,Peter P. Pramstaller,David S. Siscovick,Thomas J. Wang,Thomas J. Wang,Vilmundur Gudnason,Cornelia M. van Duijn,Stephan B. Felix,Glenn I. Fishman,Yalda Jamshidi,Yalda Jamshidi,Bruno H. Stricker,Nilesh J. Samani,Nilesh J. Samani,Stefan Kääb,Dan E. Arking +117 more
TL;DR: It is demonstrated that SCN10A, a candidate gene at the most significantly associated locus in this study, is expressed in the mouse ventricular conduction system, and treatment with a selective SCN 10A blocker prolongs QRS duration.
Journal ArticleDOI
Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides.
Don D. Nguyen,Alexey V. Melnik,Nobuhiro Koyama,Nobuhiro Koyama,Xiaowen Lu,Michelle Schorn,Jinshu Fang,Kristen Aguinaldo,Tommie Lincecum,Maarten G. K. Ghequire,Víctor J. Carrión,Tina L. Cheng,Brendan M. Duggan,Jacob G. Malone,Jacob G. Malone,Tim H. Mauchline,Laura M. Sanchez,A. Marm Kilpatrick,Jos M. Raaijmakers,René De Mot,Bradley S. Moore,Bradley S. Moore,Marnix H. Medema,Pieter C. Dorrestein,Pieter C. Dorrestein +24 more
TL;DR: By indexing the Pseudomonas specialized metabolome, this work reports the molecular-networking-based discovery of four molecules and their evolutionary relationships: a poaeamide analogue and a molecular subfamily of cyclic lipopeptides, bananamides 1, 2 and 3.
Journal ArticleDOI
Adaptive evolution of complex innovations through stepwise metabolic niche expansion.
Balázs Szappanos,Jonathan Fritzemeier,Bálint Csörgő,Viktória Lázár,Xiaowen Lu,Gergely Fekete,Balázs Bálint,Róbert Herczeg,István Nagy,Richard A. Notebaart,Martin J. Lercher,Csaba Pál,Balázs Papp +12 more
TL;DR: This work demonstrates how complex innovations can evolve through series of adaptive steps without the need to invoke non-adaptive processes.