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Journal ArticleDOI

A gene encoding maize caffeoyl-CoA O-methyltransferase confers quantitative resistance to multiple pathogens

TLDR
It is suggested that resistance might be caused by allelic variation at the level of both gene expression and amino acid sequence, thus resulting in differences in levels of lignin and other metabolites of the phenylpropanoid pathway and regulation of programmed cell death.
Abstract
Alleles that confer multiple disease resistance (MDR) are valuable in crop improvement, although the molecular mechanisms underlying their functions remain largely unknown. A quantitative trait locus, qMdr9.02, associated with resistance to three important foliar maize diseases-southern leaf blight, gray leaf spot and northern leaf blight-has been identified on maize chromosome 9. Through fine-mapping, association analysis, expression analysis, insertional mutagenesis and transgenic validation, we demonstrate that ZmCCoAOMT2, which encodes a caffeoyl-CoA O-methyltransferase associated with the phenylpropanoid pathway and lignin production, is the gene within qMdr9.02 conferring quantitative resistance to both southern leaf blight and gray leaf spot. We suggest that resistance might be caused by allelic variation at the level of both gene expression and amino acid sequence, thus resulting in differences in levels of lignin and other metabolites of the phenylpropanoid pathway and regulation of programmed cell death.

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Journal ArticleDOI

Lignins: Biosynthesis and Biological Functions in Plants

TL;DR: It is hoped this review will give an in-depth understanding of the important roles of lignin biosynthesis in various plants’ biological processes and provide a theoretical basis for the genetic improvement of lIGNin content and composition in energy plants and crops.
Journal ArticleDOI

Contribution of phenylpropanoid metabolism to plant development and plant-environment interactions.

TL;DR: Recent progress on elucidating the contribution of phenylpropanoid metabolism to the coordination of plant development and plant-environment interaction, and metabolic flux redirection among diverse metabolic routes are summarized.
Journal ArticleDOI

Navigating complexity to breed disease-resistant crops.

TL;DR: New knowledge is benefiting crop improvement through better-informed breeding strategies that utilize diverse forms of resistance at different scales, from the genome of a single plant to the plant varieties deployed across a region.
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Exploring the Diversity of Plant Metabolism.

TL;DR: It is concluded that exploring the diversity of metabolism could provide new insights into plant evolution and domestication.
Journal ArticleDOI

Quantitative Resistance to Plant Pathogens in Pyramiding Strategies for Durable Crop Protection.

TL;DR: This review summarizes current knowledge on the genetic inheritance, molecular basis, and durability of quantitative resistance and discusses how strategies that combine major R genes and QTL in crops can maintain the effectiveness of plant resistance to pathogens.
References
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Journal ArticleDOI

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

TL;DR: The Phylogeny.fr platform transparently chains programs to automatically perform phylogenetic analyses and can also meet the needs of specialists; the first ones will find up-to-date tools chained in a phylogeny pipeline to analyze their data in a simple and robust way, while the specialists will be able to easily build and run sophisticated analyses.
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The B73 Maize Genome: Complexity, Diversity, and Dynamics

Patrick S. Schnable, +159 more
- 20 Nov 2009 - 
TL;DR: The sequence of the maize genome reveals it to be the most complex genome known to date and the correlation of methylation-poor regions with Mu transposon insertions and recombination and how uneven gene losses between duplicated regions were involved in returning an ancient allotetraploid to a genetically diploid state is reported.
Journal ArticleDOI

An “Electronic Fluorescent Pictograph” Browser for Exploring and Analyzing Large-Scale Biological Data Sets

TL;DR: The eFP Browser software is easily adaptable to microarray or other large-scale data sets from any organism and thus should prove useful to a wide community for visualizing and interpreting these data sets for hypothesis generation.
Journal ArticleDOI

Variance component model to account for sample structure in genome-wide association studies

TL;DR: A variance component approach implemented in publicly available software, EMMA eXpedited (EMMAX), that reduces the computational time for analyzing large GWAS data sets from years to hours is reported.
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