scispace - formally typeset
Open AccessJournal ArticleDOI

A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome.

TLDR
A systems biology approach based on network analysis is introduced to investigate deregulated biological processes and subsequently identify drug repurposing candidates and suggest BTK inhibitor ibrutinib to be a promising treatment through its obesity-associated inflammation lowering effect.
Abstract
Metabolic syndrome is a pathological condition characterized by obesity, hyperglycemia, hypertension, elevated levels of triglycerides and low levels of high-density lipoprotein cholesterol that increase cardiovascular disease risk and type 2 diabetes. Although numerous predisposing genetic risk factors have been identified, the biological mechanisms underlying this complex phenotype are not fully elucidated. Here we introduce a systems biology approach based on network analysis to investigate deregulated biological processes and subsequently identify drug repurposing candidates. A proximity score describing the interaction between drugs and pathways is defined by combining topological and functional similarities. The results of this computational framework highlight a prominent role of the immune system in metabolic syndrome and suggest a potential use of the BTK inhibitor ibrutinib as a novel pharmacological treatment. An experimental validation using a high fat diet-induced obesity model in zebrafish larvae shows the effectiveness of ibrutinib in lowering the inflammatory load due to macrophage accumulation. Metabolic syndrome is characterized by complex phenotypes that increases the risk of cardiovascular disease and type 2 diabetes. Here the authors’ integrative network analysis suggests BTK inhibitor ibrutinib to be a promising treatment through its obesity-associated inflammation lowering effect.

read more

Content maybe subject to copyright    Report

Citations
More filters

Integrative analysis of 111 reference human epigenomes

TL;DR: In this article, the authors describe the integrative analysis of 111 reference human epigenomes generated as part of the NIH Roadmap Epigenomics Consortium, profiled for histone modification patterns, DNA accessibility, DNA methylation and RNA expression.

Tissue-specific regulatory circuits reveal variable modular perturbations across complex diseases

TL;DR: In this article, the authors developed a comprehensive resource of 394 cell type and tissue-specific gene regulatory networks for human, each specifying the genome-wide connectivity among transcription factors, enhancers, promoters and genes.
Journal ArticleDOI

Zebrafish as an animal model for biomedical research

TL;DR: Zebrafish have several advantages compared to other vertebrate models used in modeling human diseases, particularly for large-scale genetic mutant and therapeutic compound screenings, and other biomedical research applications.
Journal ArticleDOI

Beneficial effects of flaxseed polysaccharides on metabolic syndrome via gut microbiota in high-fat diet fed mice.

TL;DR: Investigation of the effects of flaxseed polysaccharide on lipid metabolism and gut microbiota in high-fat-diet-fed mice suggests that FSP may use as a prebiotic for preventing MetS by modulating the gut microbiota.
Journal ArticleDOI

Transgenic fluorescent zebrafish lines that have revolutionized biomedical research.

TL;DR: In this article, the authors summarize representative transgenic fluorescent zebrafish lines that have revolutionized biomedical research on signal transduction, the craniofacial skeletal system, the hematopoietic system, nervous system, urogenital system, digestive system and intracellular organelles.
References
More filters
Journal ArticleDOI

Systematic Review: Process of Forming Academic Service Partnerships to Reform Clinical Education

TL;DR: This study’s findings can provide practical guidelines to steer partnership programs within the academic and clinical bodies, with the aim of providing a collaborative partnership approach to clinical education.
Journal ArticleDOI

Ror2 signaling regulates Golgi structure and transport through IFT20 for tumor invasiveness

TL;DR: It is found that intraflagellar transport 20 mediates the ability of Ror2 signaling to induce the invasiveness of tumors that lack primary cilia, and IFT20 regulates the nucleation of Golgi-derived microtubules by affecting the GM130-AKAP450 complex.
Journal ArticleDOI

Stages of embryonic development of the zebrafish.

TL;DR: A series of stages for development of the embryo of the zebrafish, Danio (Brachydanio) rerio is described, providing for flexibility and continued evolution of the staging series as the authors learn more about development in this species.
Related Papers (5)