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Chemical Probes for Understudied Kinases: Challenges and Opportunities.

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TLDR
In this paper, the authors highlight recent case studies illustrating the development of high-quality chemical probes for less-studied kinases and their application in target validation and discuss the associated challenges and opportunities.
Abstract
Over 20 years after the approval of the first-in-class protein kinase inhibitor imatinib, the biological function of a significant fraction of the human kinome remains poorly understood while most research continues to be focused on few well-validated targets. Given the strong genetic evidence for involvement of many kinases in health and disease, the understudied fraction of the kinome holds a large and unexplored potential for future therapies. Specific chemical probes are indispensable tools to interrogate biology enabling proper preclinical validation of novel kinase targets. In this Perspective, we highlight recent case studies illustrating the development of high-quality chemical probes for less-studied kinases and their application in target validation. We spotlight emerging techniques and approaches employed in the generation of chemical probes for protein kinases and beyond and discuss the associated challenges and opportunities.

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Citations
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Journal ArticleDOI

Development of the First Covalent Monopolar Spindle Kinase 1 (MPS1/TTK) Inhibitor

TL;DR: In this paper , the authors present the first irreversible covalent MPS1 inhibitor, RMS-07, targeting a poorly conserved cysteine in the kinase's hinge region.
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Development and therapeutic potential of adaptor-associated kinase 1 inhibitors in human multifaceted diseases.

TL;DR: In this paper , the structure, biological function, and disease relevance of Adaptor-Associated Kinase 1 (AAK1) have been analyzed and the structure-activity relationships (SARs) of small molecule AAK1 inhibitors based on different binding modalities were discussed.
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Discovery of a Potent and Highly Isoform-Selective Inhibitor of the Neglected Ribosomal Protein S6 Kinase Beta 2 (S6K2).

TL;DR: In this article, the authors designed the first potent and highly isoform-specific S6K2 inhibitor from a known S 6K1-selective inhibitor, which was merged with a covalent inhibitor engaging a cysteine located in the hinge region in the fibroblast growth factor receptor kinase (FGFR) 4 via a nucleophilic aromatic substitution (SNAr) reaction.
Journal ArticleDOI

Covalent chemical probes for protein kinases

TL;DR: In this article , the properties and generation of covalent kinase inhibitors are discussed, with a special emphasis on electrophilic functional groups that can be used as "warheads".
Journal ArticleDOI

Small-molecule inhibition of the archetypal UbiB protein COQ8

TL;DR: This work repurposed the 4-anilinoquinoline scaffold to selectively inhibit human COQ8A in cells and promises to lend mechanistic insights into the activities of these widespread and understudied proteins and to offer potential therapeutic strategies for human diseases connected to their dysfunction.
References
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Journal ArticleDOI

Initial sequencing and analysis of the human genome.

Eric S. Lander, +248 more
- 15 Feb 2001 - 
TL;DR: The results of an international collaboration to produce and make freely available a draft sequence of the human genome are reported and an initial analysis is presented, describing some of the insights that can be gleaned from the sequence.
Journal ArticleDOI

The sequence of the human genome.

J. Craig Venter, +272 more
- 16 Feb 2001 - 
TL;DR: Comparative genomic analysis indicates vertebrate expansions of genes associated with neuronal function, with tissue-specific developmental regulation, and with the hemostasis and immune systems are indicated.
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The Protein Kinase Complement of the Human Genome

TL;DR: The protein kinase complement of the human genome is catalogued using public and proprietary genomic, complementary DNA, and expressed sequence tag sequences to provide a starting point for comprehensive analysis of protein phosphorylation in normal and disease states and a detailed view of the current state of human genome analysis through a focus on one large gene family.
Journal ArticleDOI

A Gain-of-Function Mutation of JAK2 in Myeloproliferative Disorders

TL;DR: Genetic evidence and in vitro functional studies indicate that V617F gives hematopoietic precursors proliferative and survival advantages and a high proportion of patients with myeloproliferative disorders carry a dominant gain-of-function mutation of JAK2.
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