Open AccessBook
ggplot2: Elegant Graphics for Data Analysis
Reads0
Chats0
TLDR
This book describes ggplot2, a new data visualization package for R that uses the insights from Leland Wilkisons Grammar of Graphics to create a powerful and flexible system for creating data graphics.Abstract:
This book describes ggplot2, a new data visualization package for R that uses the insights from Leland Wilkisons Grammar of Graphics to create a powerful and flexible system for creating data graphics. With ggplot2, its easy to: produce handsome, publication-quality plots, with automatic legends created from the plot specification superpose multiple layers (points, lines, maps, tiles, box plots to name a few) from different data sources, with automatically adjusted common scales add customisable smoothers that use the powerful modelling capabilities of R, such as loess, linear models, generalised additive models and robust regression save any ggplot2 plot (or part thereof) for later modification or reuse create custom themes that capture in-house or journal style requirements, and that can easily be applied to multiple plots approach your graph from a visual perspective, thinking about how each component of the data is represented on the final plot. This book will be useful to everyone who has struggled with displaying their data in an informative and attractive way. You will need some basic knowledge of R (i.e. you should be able to get your data into R), but ggplot2 is a mini-language specifically tailored for producing graphics, and youll learn everything you need in the book. After reading this book youll be able to produce graphics customized precisely for your problems,and youll find it easy to get graphics out of your head and on to the screen or page.read more
Citations
More filters
Journal ArticleDOI
Human plasma and serum extracellular small RNA reference profiles and their clinical utility.
Klaas E.A. Max,Klaas E.A. Max,Karl Bertram,Karl Bertram,Kemal M. Akat,Kemal M. Akat,Kimberly Bogardus,Kimberly Bogardus,Jenny Li,Jenny Li,Pavel Morozov,Pavel Morozov,Iddo Z. Ben-Dov,Xin Li,Zachary R Weiss,Azadeh Azizian,Anuoluwapo Sopeyin,Anuoluwapo Sopeyin,Thomas G. Diacovo,Catherine Adamidi,Catherine Adamidi,Zev Williams,Thomas Tuschl,Thomas Tuschl +23 more
TL;DR: An automated, high-throughput approach for recovery of exRNAs and exDNA from the same biofluid sample is developed and suggests that plasma and serum RNA profiles are stable over months and can be routinely monitored in long-term clinical studies.
Journal ArticleDOI
Transdifferentiation and Proliferation in Two Distinct Hemocyte Lineages in Drosophila melanogaster Larvae after Wasp Infection.
Ines Anderl,Ines Anderl,Laura Vesala,Teemu O. Ihalainen,Leena-Maija Vanha-aho,István Andó,Mika Rämet,Mika Rämet,Dan Hultmark,Dan Hultmark +9 more
TL;DR: The data indicate that lamellocyte differentiation upon wasp parasitism is a plastic and dynamic process and flow cytometry with in vivo hemocyte reporters can be used to study this phenomenon in detail.
Journal ArticleDOI
Association between Household Air Pollution Exposure and Chronic Obstructive Pulmonary Disease Outcomes in 13 Low- and Middle-Income Country Settings
Trishul Siddharthan,Matthew R. Grigsby,Dina Goodman,Muhammad Ashique Haider Chowdhury,Adolfo Rubinstein,Vilma Irazola,Laura Gutierrez,J. Jaime Miranda,Antonio Bernabe-Ortiz,Dewan S. Alam,Bruce Kirenga,Rupert Jones,Frederick van Gemert,Robert A. Wise,William Checkley +14 more
TL;DR: Household air pollution exposure was associated with a higher prevalence of COPD, particularly among women, and it is likely a leading population‐attributable risk factor for COPD in resource‐poor settings.
Journal ArticleDOI
Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study
Lei Sun,Zhihua Zhang,Timothy L. Bailey,Andrew C. Perkins,Michael R. Tallack,Zhao-Xu Xu,Hui Liu +6 more
TL;DR: A computational pipeline for detecting novel lncRNAs from the RNA-Seq data is presented and can predict a set of novels, which have shorter transcript length, fewer exons, shorter putative open reading frame, compared with known protein-coding transcripts.
Journal ArticleDOI
Reducing Urban Greenhouse Gas Footprints
Peter-Paul Pichler,Timm Zwickel,Abel Chavez,Tino Kretschmer,Jessica Seddon,Helga Weisz,Helga Weisz +6 more
TL;DR: This study provides the first internationally comparable GHG footprints for four cities (Berlin, Delhi NCT, Mexico City, and New York metropolitan area) applying a consistent method that can be extended to other global cities using available data.