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ggplot2: Elegant Graphics for Data Analysis
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TLDR
This book describes ggplot2, a new data visualization package for R that uses the insights from Leland Wilkisons Grammar of Graphics to create a powerful and flexible system for creating data graphics.Abstract:
This book describes ggplot2, a new data visualization package for R that uses the insights from Leland Wilkisons Grammar of Graphics to create a powerful and flexible system for creating data graphics. With ggplot2, its easy to: produce handsome, publication-quality plots, with automatic legends created from the plot specification superpose multiple layers (points, lines, maps, tiles, box plots to name a few) from different data sources, with automatically adjusted common scales add customisable smoothers that use the powerful modelling capabilities of R, such as loess, linear models, generalised additive models and robust regression save any ggplot2 plot (or part thereof) for later modification or reuse create custom themes that capture in-house or journal style requirements, and that can easily be applied to multiple plots approach your graph from a visual perspective, thinking about how each component of the data is represented on the final plot. This book will be useful to everyone who has struggled with displaying their data in an informative and attractive way. You will need some basic knowledge of R (i.e. you should be able to get your data into R), but ggplot2 is a mini-language specifically tailored for producing graphics, and youll learn everything you need in the book. After reading this book youll be able to produce graphics customized precisely for your problems,and youll find it easy to get graphics out of your head and on to the screen or page.read more
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Journal ArticleDOI
Soil Property and Class Maps of the Conterminous United States at 100-Meter Spatial Resolution
Amanda Ramcharan,Tomislav Hengl,Travis W. Nauman,Colby W. Brungard,Sharon Waltman,Skye Wills,James Thompson +6 more
TL;DR: In this paper, the authors combined three US soil point datasets with a stack of over 200 environmental datasets and gSSURGO polygon maps to generate complete coverage gridded predictions at 100-m spatial resolution of six soil properties (percentage of organic C, total N, bulk density, pH, and percentage of sand and clay) and two US soil taxonomic classes (291 great groups [GGs] and 78 modified particle size classes [mPSCs]) for the conterminous United States.
Journal ArticleDOI
A comprehensive, cell specific microRNA catalogue of human peripheral blood.
Simonas Juzenas,Geetha Venkatesh,Matthias Hübenthal,Marc P. Hoeppner,Zhipei Gracie Du,Maren Paulsen,Philip Rosenstiel,Philipp Senger,Martin Hofmann-Apitius,Andreas Keller,Limas Kupčinskas,Andre Franke,Georg Hemmrich-Stanisak +12 more
TL;DR: The study provides the most comprehensive contribution to date towards a complete miRNA catalogue of human peripheral blood, which can be used as a reference for future studies and defines the blood cell-specific miRNA and isomiR expression patterns and identify novel cell type specific miRNA candidates.
Journal ArticleDOI
Social-Emotional Learning Program to Reduce Bullying, Fighting, and Victimization Among Middle School Students With Disabilities:
TL;DR: In this paper, the Second Step: Student Success Through Prevention (SS-SSTP) middle school program on reducing bullying, physical aggression, and peer victimization among students with disabilities is presented.
Journal ArticleDOI
Influence of geolocation and ethnicity on the phenotypic expression of primary Sjögren's syndrome at diagnosis in 8310 patients: a cross-sectional study from the Big Data Sjögren Project Consortium.
Pilar Brito-Zerón,Pilar Brito-Zerón,Nihan Acar-Denizli,Margit Zeher,Astrid Rasmussen,Raphaèle Seror,Elke Theander,Xiaomei Li,Chiara Baldini,Jacques-Eric Gottenberg,Debashish Danda,Luca Quartuccio,Roberta Priori,Gabriela Hernández-Molina,Aike A. Kruize,Valeria Valim,Marika Kvarnström,Damien Sène,Roberto Gerli,Sonja Praprotnik,David A. Isenberg,Roser Solans,Maureen Rischmueller,Seung Ki Kwok,Gunnel Nordmark,Yasunori Suzuki,Roberto Giacomelli,Valérie Devauchelle-Pensec,Michele Bombardieri,Benedikt Hofauer,Hendrika Bootsma,Johan G. Brun,Guadalupe Fraile,Steven E. Carsons,Tamer A. Gheita,Jacques Morel,Cristina Vollenveider,Fabiola Atzeni,Soledad Retamozo,Ildikó Horváth,Kathy L. Sivils,Thomas Mandl,Pulukool Sandhya,Salvatore De Vita,Jorge Sanchez-Guerrero,Eefje van der Heijden,Virginia Fernandes Moça Trevisani,Marie Wahren-Herlenius,Xavier Mariette,Manuel Ramos-Casals +49 more
TL;DR: This study provides the first evidence of a strong influence of geolocation and ethnicity on the phenotype of primary Sjögren's syndrome at diagnosis.
Journal ArticleDOI
Screening drug effects in patient-derived cancer cells links organoid responses to genome alterations
Julia Jabs,Julia Jabs,Franziska M. Zickgraf,Jeongbin Park,Jeongbin Park,Steve Wagner,Xiaoqi Jiang,Katharina Jechow,Katharina Jechow,Kortine Kleinheinz,Kortine Kleinheinz,Umut H. Toprak,Marc A Schneider,Michael Meister,Saskia Spaich,Marc Sütterlin,Matthias Schlesner,Andreas Trumpp,Martin R. Sprick,Roland Eils,Christian Conrad,Christian Conrad +21 more
TL;DR: The results highlight the dependency of cytostatic drugs and pharmacogenomic associations on culture systems, and guide culture selection for drug tests, and highlight the importance of standardization in cancer drug screening.