SorGSD: a sorghum genome SNP database
Hong Luo,Wenming Zhao,Yanqing Wang,Yan Xia,Xiaoyuan Wu,Limin Zhang,Bixia Tang,Junwei Zhu,Lu Fang,Zhenglin Du,Wubishet A. Bekele,Shuaishuai Tai,David Jordan,Ian D. Godwin,Rod J. Snowdon,Emma S. Mace,Hai-Chun Jing,Jingchu Luo +17 more
TLDR
SorGSD is a comprehensive web-portal providing a database of large-scale genome variation across all racial types of cultivated sorghum and wild relatives and can serve as a bioinformatics platform for a range of genomics and molecular breeding activities for sorghums and for other C4 grasses.Abstract:
Background
Sorghum (Sorghum bicolor) is one of the most important cereal crops globally and a potential energy plant for biofuel production. In order to explore genetic gain for a range of important quantitative traits, such as drought and heat tolerance, grain yield, stem sugar accumulation, and biomass production, via the use of molecular breeding and genomic selection strategies, knowledge of the available genetic variation and the underlying sequence polymorphisms, is required.read more
Citations
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The Big Data Center: from deposition to integration and to translation
TL;DR: The BIG Data Center, established at Beijing Institute of Genomics (BIG), Chinese Academy of Sciences, provides a suite of database resources, providing freely open access to a variety of data resources in support of worldwide research activities in both academia and industry.
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Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021.
TL;DR: BI Search, a scalable, one-stop, cross-database search engine, has been significantly updated by providing easy access to a large number of internal and external biological resources from CNCB-NGDC, its partners, EBI and NCBI.
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Designing Future Crops: Genomics-Assisted Breeding Comes of Age
Rajeev K. Varshney,Rajeev K. Varshney,Abhishek Bohra,Jianming Yu,Andreas Graner,Qifa Zhang,Mark E. Sorrells +6 more
TL;DR: In this article, a suite of new approaches that fast-track targeted manipulation of allelic variation for creating novel diversity and facilitate their rapid and efficient incorporation in crop improvement programs is presented.
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Sweet sorghum as biofuel feedstock: recent advances and available resources
TL;DR: Various attributes of sweet sorghum that make it an ideal candidate for biofuel feedstock are discussed, and an overview of genetic diversity, tools, and resources available for engineering and/or marker-assisting breeding of sweet Sorghum are provided.
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The sorghum SWEET gene family: stem sucrose accumulation as revealed through transcriptome profiling
TL;DR: The key SWEET genes for technological improvement of sorghum in the production of biofuels are determined: SbSWEET8-1 for efflux of sucrose from the leaf; SbsWEET4-3 for unloading suc rose from the phloem in the stem; and Sb sWEET2-1 and S bSWEet7-1 in the same clade as seed development and AtS WEET8/RPG1 that
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