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Open AccessJournal ArticleDOI

Test sensitivity is secondary to frequency and turnaround time for COVID-19 screening.

TLDR
It is demonstrated that effective screening depends largely on frequency of testing and speed of reporting and is only marginally improved by high test sensitivity, and should prioritize accessibility, frequency, and sample-to-answer time.
Abstract
The COVID-19 pandemic has created a public health crisis. Because SARS-CoV-2 can spread from individuals with presymptomatic, symptomatic, and asymptomatic infections, the reopening of societies and the control of virus spread will be facilitated by robust population screening, for which virus testing will often be central. After infection, individuals undergo a period of incubation during which viral titers are too low to detect, followed by exponential viral growth, leading to peak viral load and infectiousness and ending with declining titers and clearance. Given the pattern of viral load kinetics, we model the effectiveness of repeated population screening considering test sensitivities, frequency, and sample-to-answer reporting time. These results demonstrate that effective screening depends largely on frequency of testing and speed of reporting and is only marginally improved by high test sensitivity. We therefore conclude that screening should prioritize accessibility, frequency, and sample-to-answer time; analytical limits of detection should be secondary.

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Citations
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Ferrobotic swarms enable accessible and adaptable automated viral testing

TL;DR: In this article , the authors used a swarm of millimetre-sized magnets as mobile robotic agents for precise and robust handling of magnetized sample droplets and high-fidelity delivery of flexible workflows based on nucleic acid amplification tests.
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Rapid SARS-CoV-2 antigen detection by immunofluorescence - a new tool to detect infectivity

TL;DR: The evaluated SARS-CoV-2 antigen rapid fluorescence immunoassays reliably identified patients within the first 5 days of symptom onset, when respiratory secretions carried high viral loads.
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Projections of the transmission of the Omicron variant for Toronto, Ontario, and Canada using surveillance data following recent changes in testing policies

TL;DR: In this article , the authors designed a compartmental model which captured the new testing guidelines, social behaviours, booster vaccines campaign and features of the newest variant Omicron, and calibrated the model using data from January 1 to February 9, 2022, on cases and severe outcomes in Canada, the province of Ontario and City of Toronto.
Journal ArticleDOI

An examination of school reopening strategies during the SARS-CoV-2 pandemic.

TL;DR: In this article, the authors compared the impact of physical separation through school cohorts on SARS-CoV-2 infections against policies acting at the level of individual contacts within classrooms, and concluded that reducing the number of contacts through cohorts produces a larger effect than diminishing transmission rates per contact.
Posted ContentDOI

Higher viral load drives infrequent SARS-CoV-2 transmission between asymptomatic residence hall roommates

TL;DR: This analysis argues that inter-roommate transmission occurs in a minority of cases in university residence halls and provides strong correlative evidence that viral load can be proportional to the probability of transmission.
References
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Journal ArticleDOI

The Incubation Period of Coronavirus Disease 2019 (COVID-19) From Publicly Reported Confirmed Cases: Estimation and Application.

TL;DR: The results support current proposals for the length of quarantine or active monitoring of persons potentially exposed to SARS-CoV-2, although longer monitoring periods might be justified in extreme cases.
Journal ArticleDOI

Temporal dynamics in viral shedding and transmissibility of COVID-19.

TL;DR: It is estimated that 44% (95% confidence interval, 25–69%) of secondary cases were infected during the index cases’ presymptomatic stage, in settings with substantial household clustering, active case finding and quarantine outside the home.
Journal ArticleDOI

Sensitivity of Chest CT for COVID-19: Comparison to RT-PCR

TL;DR: In a series of 51 patients with chest CT and real-time polymerase chain reaction assay (RT-PCR) performed within 3 days, the sensitivity of CT for 2019 novel coronavirus infection was 98% and that ...
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