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Open AccessJournal ArticleDOI

Test sensitivity is secondary to frequency and turnaround time for COVID-19 screening.

TLDR
It is demonstrated that effective screening depends largely on frequency of testing and speed of reporting and is only marginally improved by high test sensitivity, and should prioritize accessibility, frequency, and sample-to-answer time.
Abstract
The COVID-19 pandemic has created a public health crisis. Because SARS-CoV-2 can spread from individuals with presymptomatic, symptomatic, and asymptomatic infections, the reopening of societies and the control of virus spread will be facilitated by robust population screening, for which virus testing will often be central. After infection, individuals undergo a period of incubation during which viral titers are too low to detect, followed by exponential viral growth, leading to peak viral load and infectiousness and ending with declining titers and clearance. Given the pattern of viral load kinetics, we model the effectiveness of repeated population screening considering test sensitivities, frequency, and sample-to-answer reporting time. These results demonstrate that effective screening depends largely on frequency of testing and speed of reporting and is only marginally improved by high test sensitivity. We therefore conclude that screening should prioritize accessibility, frequency, and sample-to-answer time; analytical limits of detection should be secondary.

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DiffBrainNet: differential analyses add new insights into the response to glucocorticoids at the level of genes, networks and brain regions

TL;DR: DiffBrainNet as mentioned in this paper is a publicly available resource for the study of the transcriptional landscape of the mouse brain, which can identify molecular pathways important for basic functioning and response to glucocorticoids in a brain-region specific manner.
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Optimizing COVID-19 testing strategies on college campuses: evaluation of the health and economic costs

TL;DR: In this paper , the authors developed a decision-support tool to aid in the design of university-based testing strategies using a mathematical model of SARS-CoV-2 transmission, and applied this framework to a large public university reopening in the fall of 2021 with a 60% student vaccination rate.
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Phenotypic Variation from Waterlogging in Multiple Perennial Ryegrass Varieties under Climate Change Conditions

TL;DR: In this paper , the effect of long-term waterlogging on phenotypic responses of perennial ryegrass using four varieties grown in atmospherically controlled growth chambers (ambient vs 2050, +2°C and eCO 2 ) during two months of peak growth.
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Systematic analysis and optimization of early warning signals for critical transitions

TL;DR: In this article , the authors systematically investigate properties and performance of dynamical early warning signals in different deteriorating conditions, and propose an optimised combination to trigger warnings as early as possible, eventually verified on experimental data.
References
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Journal ArticleDOI

The Incubation Period of Coronavirus Disease 2019 (COVID-19) From Publicly Reported Confirmed Cases: Estimation and Application.

TL;DR: The results support current proposals for the length of quarantine or active monitoring of persons potentially exposed to SARS-CoV-2, although longer monitoring periods might be justified in extreme cases.
Journal ArticleDOI

Temporal dynamics in viral shedding and transmissibility of COVID-19.

TL;DR: It is estimated that 44% (95% confidence interval, 25–69%) of secondary cases were infected during the index cases’ presymptomatic stage, in settings with substantial household clustering, active case finding and quarantine outside the home.
Journal ArticleDOI

Sensitivity of Chest CT for COVID-19: Comparison to RT-PCR

TL;DR: In a series of 51 patients with chest CT and real-time polymerase chain reaction assay (RT-PCR) performed within 3 days, the sensitivity of CT for 2019 novel coronavirus infection was 98% and that ...
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