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Open AccessJournal ArticleDOI

What’s normal? Oligosaccharide concentrations and profiles in milk produced by healthy women vary geographically

TLDR
The hypothesis that normal HMO concentrations and profiles vary geographically, even in healthy women is supported and targeted genomic analyses are required to determine whether these differences are due at least in part to genetic variation.
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This article is published in The American Journal of Clinical Nutrition.The article was published on 2017-05-01 and is currently open access. It has received 263 citations till now. The article focuses on the topics: Postpartum period.

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Systematic Characterization and Longitudinal Study Reveal Distinguishing Features of Human Milk Oligosaccharides in China.

TL;DR: Dynamic changes of 24 HMOs in secretors and nonsecretors during lactation revealed unique features of these HMO profiles in the milk of Chinese mothers and Interestingly, 2′-FL concentrations insecretors were found to be lower than those of Western populations but higher than those in African populations.
Journal ArticleDOI

Human Milk Oligosaccharide Profiles and Associations with Maternal Nutritional Factors: A Scoping Review

TL;DR: In this article, the authors examined current knowledge of the effect of maternal diet and nutritional status on the composition of human milk oligosaccharides (HMOs) in breast milk, using the PRISMA-ScR guidelines, a comprehensive, systematic literature search was conducted using Scopus, Web of Science, Global Health (CABI), and MEDLINE.
Journal ArticleDOI

Diversification of a Fucosyllactose Transporter within the Genus <i>Bifidobacterium</i>

TL;DR: Human milk oligosaccharides from breast milk selectively promote the growth of specific taxa such as bifidobacteria, thus forming an HMO-mediated host-microbe symbiosis as discussed by the authors .
Posted ContentDOI

Elucidating Human Milk Oligosaccharide biosynthetic genes through network-based multi-omics integration

TL;DR: A systems biology framework was used that integrated glycan and RNA expression data to construct an HMO biosynthetic network and predict glycosyltransferases involved and proposed candidate genes for elongation, branching, fucosylation, and sialylation of HMOs.
References
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Journal Article

R: A language and environment for statistical computing.

R Core Team
- 01 Jan 2014 - 
TL;DR: Copyright (©) 1999–2012 R Foundation for Statistical Computing; permission is granted to make and distribute verbatim copies of this manual provided the copyright notice and permission notice are preserved on all copies.
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Controlling the false discovery rate: a practical and powerful approach to multiple testing

TL;DR: In this paper, a different approach to problems of multiple significance testing is presented, which calls for controlling the expected proportion of falsely rejected hypotheses -the false discovery rate, which is equivalent to the FWER when all hypotheses are true but is smaller otherwise.
Book

ggplot2: Elegant Graphics for Data Analysis

TL;DR: This book describes ggplot2, a new data visualization package for R that uses the insights from Leland Wilkisons Grammar of Graphics to create a powerful and flexible system for creating data graphics.
Journal ArticleDOI

Metagenes and molecular pattern discovery using matrix factorization.

TL;DR: Nonnegative matrix factorization is described, an algorithm based on decomposition by parts that can reduce the dimension of expression data from thousands of genes to a handful of metagenes, and found less sensitive to a priori selection of genes or initial conditions and able to detect alternative or context-dependent patterns of gene expression in complex biological systems.
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