Showing papers on "Oyster published in 2018"

The oyster immunity.

Abstract: Oysters, the common name for a number of different bivalve molluscs, are the worldwide aquaculture species and also play vital roles in the function of ecosystem As invertebrate, oysters have evolved an integrated, highly complex innate immune system to recognize and eliminate various invaders via an array of orchestrated immune reactions, such as immune recognition, signal transduction, synthesis of antimicrobial peptides, as well as encapsulation and phagocytosis of the circulating haemocytes The hematopoietic tissue, hematopoiesis, and the circulating haemocytes have been preliminary characterized, and the detailed annotation of the Pacific oyster Crassostrea gigas genome has revealed massive expansion and functional divergence of innate immune genes in this animal Moreover, immune priming and maternal immune transfer are reported in oysters, suggesting the adaptability of invertebrate immunity Apoptosis and autophagy are proved to be important immune mechanisms in oysters This review will summarize the research progresses of immune system and the immunomodulation mechanisms of the primitive catecholaminergic, cholinergic, neuropeptides, GABAergic and nitric oxidase system, which possibly make oysters ideal model for studying the origin and evolution of immune system and the neuroendocrine-immune regulatory network in lower invertebrates

Immune-suppression by OsHV-1 viral infection causes fatal bacteraemia in Pacific oysters

Abstract: Infectious diseases are mostly explored using reductionist approaches despite repeated evidence showing them to be strongly influenced by numerous interacting host and environmental factors. Many diseases with a complex aetiology therefore remain misunderstood. By developing a holistic approach to tackle the complexity of interactions, we decipher the complex intra-host interactions underlying Pacific oyster mortality syndrome affecting juveniles of Crassostrea gigas, the main oyster species exploited worldwide. Using experimental infections reproducing the natural route of infection and combining thorough molecular analyses of oyster families with contrasted susceptibilities, we demonstrate that the disease is caused by multiple infection with an initial and necessary step of infection of oyster haemocytes by the Ostreid herpesvirus OsHV-1 µVar. Viral replication leads to the host entering an immune-compromised state, evolving towards subsequent bacteraemia by opportunistic bacteria. We propose the application of our integrative approach to decipher other multifactorial diseases that affect non-model species worldwide.

Divergence and plasticity shape adaptive potential of the Pacific oyster

Abstract: The interplay between divergence and phenotypic plasticity is critical to our understanding of a species' adaptive potential under rapid climate changes. We investigated divergence and plasticity in natural populations of the Pacific oyster Crassostrea gigas with a congeneric oyster Crassostrea angulata from southern China used as an outgroup. Genome re-sequencing of 371 oysters revealed unexpected genetic divergence in a small area that coincided with phenotypic divergence in growth, physiology, heat tolerance and gene expression across environmental gradients. These findings suggest that selection and local adaptation are pervasive and, together with limited gene flow, influence population structure. Genes showing sequence differentiation between populations also diverged in transcriptional response to heat stress. Plasticity in gene expression is positively correlated with evolved divergence, indicating that plasticity is adaptive and favoured by organisms under dynamic environments. Divergence in heat tolerance-partly through acetylation-mediated energy depression-implies differentiation in adaptive potential. Trade-offs between growth and survival may play an important role in local adaptation of oysters and other marine invertebrates.

Genomic Selection for Growth Traits in Pacific Oyster (Crassostrea gigas): Potential of Low-Density Marker Panels for Breeding Value Prediction.

Abstract: Pacific oysters are a key aquaculture species globally, and genetic improvement via selective breeding is a major target Genomic selection has the potential to expedite genetic gain for key target traits of a breeding program, but has not yet been evaluated in oyster The recent development of SNP arrays for Pacific oyster (Crassostrea gigas) raises the opportunity to test genomic selection strategies for polygenic traits In this study, a population of 820 oysters (comprising 23 full-sibling families) were genotyped using a medium density SNP array (23 K informative SNPs), and the genetic architecture of growth-related traits [shell height (SH), shell length (SL), and wet weight (WW)] was evaluated Heritability was estimated to be moderate for the three traits (026 ± 006 for SH, 023 ± 006 for SL and 035 ± 005 for WW), and results of a GWAS indicated that the underlying genetic architecture was polygenic Genomic prediction approaches were used to estimate breeding values for growth, and compared to pedigree based approaches The accuracy of the genomic prediction models (GBLUP) outperformed the traditional pedigree approach (PBLUP) by ∼25% for SL and WW, and ∼30% for SH Further, reduction in SNP marker density had little impact on prediction accuracy, even when density was reduced to a few hundred SNPs These results suggest that the use of genomic selection in oyster breeding could offer benefits for the selection of breeding candidates to improve complex economic traits at relatively modest cost

The genome of the oyster Saccostrea offers insight into the environmental resilience of bivalves

Abstract: Oysters are keystone species in estuarine ecosystems and are of substantial economic value to fisheries and aquaculture worldwide. Contending with disease and environmental stress are considerable challenges to oyster culture. Here we report a draft genome of the Sydney Rock Oyster, Saccostrea glomerata, an iconic and commercially important species of edible oyster in Australia known for its enhanced resilience to harsh environmental conditions. This is the second reference genome to be reported from the family Ostreidae enabling a genus-level study of lophotrochozoan genome evolution. Our analysis of the 784-megabase S. glomerata genome shows extensive expansions of gene families associated with immunological non-self-recognition. Transcriptomic analysis revealed highly tissue-specific patterns of expression among these genes, suggesting a complex assortment of immune receptors provide this oyster with a unique capacity to recognize invading microbes. Several gene families involved in stress response are notably expanded in Saccostrea compared with other oysters, and likely key to this species' adaptations for improved survival higher in the intertidal zone. The Sydney Rock Oyster genome provides a valuable resource for future research in molluscan biology, evolution and environmental resilience. Its close relatedness to Crassostrea will further comparative studies, advancing the means for improved oyster agriculture and conservation.

Bioactive compounds and medicinal properties of Oyster mushrooms (Pleurotus sp.)

Abstract: Abstract There are about 40 species in the Pleurotus genus, including those with high economic significance, i.e. P. ostreatus and P. pulmonarius. The fruiting bodies of oyster mushrooms are of high nutritional and health-promoting value. In addition, many species belonging to the Pleurotus genus have been used as sources of substances with documented medicinal properties, such as high-molecular weight bioactive compounds (polysaccharides, peptides and proteins) and low-molecular weight compounds (terpenoids, fatty acid esters and polyphenols). The bioactive substances contained in the mycelium and fruiting bodies of Pleurotus species exhibit immunostimulatory, anti-neoplastic, anti-diabetic, anti-atherosclerotic, anti-inflammatory, antibacterial and anti-oxidative properties. Their multidirectional positive influence on the human organism is the result of interaction of bioactive substances. Extracts from individual Pleurotus species can be used for the production of dietary supplements increasing the organism’s immunity. They are also used for the production of cosmetics. They can be added to functional foods as probiotics, or used as natural preservatives or ingredients of special foodstuffs for patients with specific diseases.

Use of low-field-NMR and MRI to characterize water mobility and distribution in pacific oyster (Crassostrea gigas) during drying process

Abstract: Low-field nuclear magnetic resonance (LF-NMR) and magnetic resonance imaging (MRI) were used to monitor the water mobility and distribution of Pacific oyster during drying process. The results show the mobilities of bulk, immobilized, and free water were reduced, and the immobilized water was removed dramatically. T2-weighted images displayed the water decrease from the external surface to inner center of oyster during drying. In addition, excellent correlations between the total moisture content and T22 and A22 were observed with coefficients 0.9777 and 0.9832, respectively. Principal component analysis showed the drying degree of oyster could be monitored based on raw relaxation data. Thus, the result revealed that LF-NMR and MRI have great potential in assessing water mobility and distribution in oyster during drying process.

On spiking behaviour of oyster fungi Pleurotus djamor

Abstract: We recorded extra-cellular electrical potential of fruit bodies of oyster fungi Pleurotus djamor. We demonstrated that the fungi generate action potential like impulses of electrical potential. Trains of the spikes are observed. Two types of spiking activity are uncovered: high-frequency (period 2.6 min) and low-frequency (period 14 min); transitions between modes of spiking are illustrated. An electrical response of fruit bodies to short (5 sec) and long (60 sec) thermal stimulation with open flame is analysed in details. We show that non-stimulated fruit bodies of a cluster react to the thermal stimulation, with a single action-potential like spike, faster than the stimulated fruit body does.

Oyster Culture in European Countries

Abstract: Three species of oysters have been or are cultivated in Europe: Crassostrea angulata, C. gigas, and Ostrea edulis. If we follow the taxonomic critera of Grasse, the European oysters belong to the group of Mollusca, class of Lamellibranchia or Bivalves, order of Filibranchia, family Ostreidae with two genera: C. angulata (Lamarck), Portuguese, cupped oyster; C. gigas, (Thunberg), Japanese or Pacific, cupped oyster; Ostrea edulis (Linne), fiat European oyster. Some authors think that C. gigas and C. angulata belong to the same species. lndeed, Ranson stated that the characteristics of the larvae are the same, and Menzel obtained viable hybrids (F2) between these two oysters. AIso, Buroker et al. in studying the genetic variations of proteins and enzymes of the flesh, revealed a genetic similarity of 99% between C. gigas and C. angulata on 24 loci. These authors proposed the hypothesis that Japanese oysters wouId have been imported from Japan to Portugal by boats in the 16th Century or vice versa. However, these two oysters obviously show different characteristics in the metabolic rate, the filtration rate, growth performance, reproduction mode, and resistance to disease. All these latter elements combine to affirm that the Portuguese and the Japanese oysters are two species with well-defined physiological characteristics, particularly with regard to oyster culture.

Trace metals in oysters: molecular and cellular mechanisms and ecotoxicological impacts.

Abstract: Oysters are important benthic bivalves in coastal and estuarine environments. They are widely farmed due to their rapid growth and taste; they are also widely applied in environmental monitoring of coastal pollution due to their accumulation of contaminants. Most importantly, oysters are among the few marine organisms that are considered to be hyper-accumulators of many toxic metals, such as cadmium, copper and zinc. As such, there is a tremendous call to study the interactions between metals and oysters, especially due to the increasing metal pollution in many coastal and estuarine waters. Over the past decades, many studies have focused on metal accumulation in oysters as well as the ecotoxicological effects of metals on oysters. In this review, we summarize the recent progress in our understanding of the molecular and cellular mechanisms of metal accumulation, sequestration and toxicity in oysters. Applications of modern technologies such as omics and nanoscale imaging have added significantly to our knowledge of metal biology in oysters. Variations between different metals also demonstrate the diversity of the interactions between oysters and metals. Despite this recent progress, however, there is a need for further study of the molecular mechanisms of metal uptake and toxicity as well as the joint effects of metal mixtures on oyster populations. Oysters have higher numbers of stress responsive genes than most animals, which may have been induced by gene duplication during the evolution of their intertidal environmental adaptations. The divergent expression of stress responsive genes may explain the different tolerances for metals among different species. These fundamental studies may eventually provide promising solutions for reducing toxic metal concentrations in oysters for safe consumption by humans. To conclude, the complexity of life history and metal chemistry of oysters coupled with emerging pollution and application of modern techniques represents an important and exciting research area in modern ecotoxicology.

Anti-fatigue and anti-oxidant activities of oyster (Ostrea rivularis) hydrolysate prepared by compound protease.

Abstract: Oyster, which is rich in protein and widely used as a marine traditional Chinese medicine, was believed to have good curative effects in health care and on chronic diseases. This study was designed to evaluate the anti-fatigue and anti-oxidant effects of oyster hydrolysate. Oyster meat (OM) was hydrolyzed with a complex protease, and oyster hydrolysate (OH) was separated by a 6 kDa ultrafiltration membrane into two fractions, OH-I (<6 kDa) and OH-II (≥6 kDa). The anti-fatigue effects of OM, OH, OH-I and OH-II groups were first investigated, and then the antioxidant activities of OH-I and OH-II were further analyzed. Anti-fatigue experimental results showed that OH-I displayed the strongest activity among the four groups. Compared to the control group, OH-I significantly prolonged swimming time (67.79%), increased the content of muscle glycogen (45.65%) and liver glycogen (49.01%), and reduced the content of blood urea nitrogen (BUN) (18.44%) (P < 0.05). Meanwhile, OH-I showed excellent chemical and cellular antioxidant activities, especially when the concentration increased; its antioxidant activity was significantly better than that of OH-II (P < 0.05). Results of an amino acid analysis showed that OH-I was rich in branched-chain amino acids (10.84 g per 100 g), Glu (8.63 g per 100 g), Tau (1.68 g per 100 g), Asp (5.02 g per 100 g) and Arg (3.61 g per 100 g), which were expected to contribute to its antioxidant and anti-fatigue activities.

Maximizing the benefits of oyster reef restoration for finfish and their fisheries

Abstract: Global declines in oyster reefs have resulted in reduced habitat heterogeneity, extent and quality for some coastal finfish, potentially reducing fish populations and catches. It is well established that habitat restoration results in higher finfish biomass and diversity where oyster reefs replace bare substrata. Therefore, restoring oyster reefs with a view to also improving fish stocks is often a key goal of oyster restoration. However, the principles of habitat quality, ecological connectivity and broader ecosystem management are poorly integrated within oyster reef restoration ecology, but such principles may be instructive in enhancing the benefits of projects on fish populations throughout estuarine seascapes. This manuscript presents a framework for projects seeking to restore both oyster reef habitat and finfish communities. Structurally and biologically complex oyster reefs, comprising both oysters and other invertebrates, are required to provide shelter, food and nursery services to fish. By carefully considering site selection at seascape scales (km to 10s of km), restoration can enhance the network of habitat available to fish and potentially increase the overall carrying capacity of the estuary. Managers of estuaries that now include restored oyster reefs should implement fisheries management plans and consider the effects of management actions broadly throughout catchments; failing to do so may jeopardize gains in fish yields. Management decisions must be adaptable, responding to key criteria in thorough monitoring programs. Integrating these ecological and coastal management concepts into oyster reef restoration will enhance outcomes for fishes and increase stakeholder engagement and cost‐effectiveness.

A Genome-Wide Association Study for Host Resistance to Ostreid Herpesvirus in Pacific Oysters (Crassostrea gigas).

Abstract: Ostreid herpesvirus (OsHV) can cause mass mortality events in Pacific oyster aquaculture. While various factors impact on the severity of outbreaks, it is clear that genetic resistance of the host is an important determinant of mortality levels. This raises the possibility of selective breeding strategies to improve the genetic resistance of farmed oyster stocks, thereby contributing to disease control. Traditional selective breeding can be augmented by use of genetic markers, either via marker-assisted or genomic selection. The aim of the current study was to investigate the genetic architecture of resistance to OsHV in Pacific oyster, to identify genomic regions containing putative resistance genes, and to inform the use of genomics to enhance efforts to breed for resistance. To achieve this, a population of ∼1,000 juvenile oysters were experimentally challenged with a virulent form of OsHV, with samples taken from mortalities and survivors for genotyping and qPCR measurement of viral load. The samples were genotyped using a recently-developed SNP array, and the genotype data were used to reconstruct the pedigree. Using these pedigree and genotype data, the first high density linkage map was constructed for Pacific oyster, containing 20,353 SNPs mapped to the ten pairs of chromosomes. Genetic parameters for resistance to OsHV were estimated, indicating a significant but low heritability for the binary trait of survival and also for viral load measures (h2 0.12 - 0.25). A genome-wide association study highlighted a region of linkage group 6 containing a significant QTL affecting host resistance. These results are an important step toward identification of genes underlying resistance to OsHV in oyster, and a step toward applying genomic data to enhance selective breeding for disease resistance in oyster aquaculture.

Diversity and evolution of living oysters

Abstract: Oysters are difficult to classify because of plasticity in shell morphology. Difficulties in classification have hindered the understanding of oyster diversity and evolution. Recent molecular studies of living oysters have revealed high genetic diversity at species, population, and genome levels. New and cryptic species have been discovered, revealing surprisingly high species diversity under similar shell morphology. Genetic analyses have identified several species complexes where low genetic divergence indicates recent or ongoing speciation during the past 3–4 million years. Ongoing speciation is also supported by exceptionally high population divergence within some species. The oyster genome is highly polymorphic and gene-rich, with extensive expansion of genes related to stress and immune responses. High levels of genetic diversity and gene expansion in oysters are likely adaptations to variable environments. Local adaptation in oysters may be pervasive but countered by strong gene flow and b...

Abundance and distribution of microplastics within surface sediments of a key shellfish growing region of Canada

Abstract: The abundance and distribution of microplastics within 5 sediment size classes (>5000 μm, 1000-5000 μm, 250-1000 μm, 250-0.63 μm and < 0.63 μm) were determined for 16 sites within Lambert Channel and Baynes Sound, British Columbia, Canada. This region is Canada's premier growing area for the Pacific oyster (Crassostrea gigas). Microplastics were found at all sampling locations indicating widespread contamination of this region with these particles. Three types of microplastics were recovered: microbeads, which occurred in the greatest number (up to 25000/kg dry sediment) and microfibers and microfragments, which were much less in number compared with microbeads and occurred in similar amounts (100-300/kg dry sediment). Microbeads were recovered primarily in the < 0.63 μm and 250-0.63 μm sediment size class, whereas microfragments and microfibers were generally identified in all 5 sediment size classes. Abundance and distribution of the three types of microplastics were spatially dependent with principal component analysis (PCA) indicating that 84 percent of the variation in abundance and distribution was due to the presence of high numbers of microbeads at three locations within the study region. At these sites, microbeads expressed as a percent component of the sediment by weight was similar to key geochemical components that govern trace metal behavior and availability to benthic organisms. Microbeads have been shown to accumulate metals from the aquatic environment, hence in addition to the traditional geochemical components such as silt and organic matter, microplastics also need to be considered as a sediment component that can influence trace metal geochemistry. Our findings have shown that BC's premier oyster growing region is highly contaminated with microplastics, notably microbeads. It would be prudent to assess the degree to which oysters from this region are ingesting microplastics. If so, it would have direct implications for Canada's oyster farming industry with respect to the health of the oyster and the quality of product that is being farmed and sets an example for other shellfish growing regions of the world.

Role of Shellfish Aquaculture in the Reduction of Eutrophication in an Urban Estuary

Abstract: Land-based management has reduced nutrient discharges; however, many coastal waterbodies remain impaired. Oyster “bioextraction” of nutrients and how oyster aquaculture might complement existing management measures in urban estuaries was examined in Long Island Sound, Connecticut. Eutrophication status, nutrient removal, and ecosystem service values were estimated using eutrophication, circulation, local- and ecosystem-scale models, and an avoided-costs valuation. System-scale modeling estimated that 1.31% and 2.68% of incoming nutrients could be removed by current and expanded production, respectively. Up-scaled local-scale results were similar to system-scale results, suggesting that this up-scaling method could be useful in bodies of water without circulation models. The value of removed nitrogen was estimated using alternative management costs (e.g., wastewater treatment) as representative, showing ecosystem service values of $8.5 and $470 million per year for current and maximum expanded production, ...

Metabolism of the Pacific oyster, Crassostrea gigas, is influenced by salinity and modulates survival to the Ostreid herpesvirus OsHV-1.

Abstract: The Pacific oyster, Crassostrea gigas, is an osmoconforming bivalve exposed to wide salinity fluctuations. The physiological mechanisms used by oysters to cope with salinity stress are energy demanding and may impair other processes, such as defense against pathogens. This oyster species has been experiencing recurrent mortality events caused by the Ostreid herpesvirus 1 (OsHV-1). The objectives of this study were to investigate the effect of salinity (10, 15, 25 and 35‰) on energetic reserves, key enzyme activities and membrane fatty acids, and to identify the metabolic risk factors related to OsHV-1-induced mortality of oysters. Acclimation to low salinity led to increased water content, protein level, and energetic reserves (carbohydrates and triglycerides) of oysters. The latter was consistent with lower activity of hexokinase, the first enzyme involved in glycolysis, up-regulation of AMP-activated protein kinase, a major regulator of cellular energy metabolism, and lower activity of catalase, an antioxidant enzyme involved in management of reactive oxygen species. Acclimation to salinity also involved a major remodeling of membrane fatty acids. Particularly, 20:4n-6 decreased linearly with decreasing salinity, likely reflecting its mobilization for prostaglandin synthesis in oysters. The survival of oysters exposed to OsHV-1 varied from 43% to 96% according to salinity ( Fuhrmann et al., 2016). Risk analyses showed that activity of superoxide dismutase and levels of proteins, carbohydrates, and triglycerides were associated with a reduced risk of death. Therefore, animals with a higher antioxidant activity and a better physiological condition seemed less susceptible to OsHV-1.

Antiviral Defense and Innate Immune Memory in the Oyster.

Abstract: The Pacific oyster, Crassostrea gigas, is becoming a valuable model for investigating antiviral defense in the Lophotrochozoa superphylum. In the past five years, improvements to laboratory-based experimental infection protocols using Ostreid herpesvirus I (OsHV-1) from naturally infected C. gigas combined with next-generation sequencing techniques has revealed that oysters have a complex antiviral response involving the activation of all major innate immune pathways. Experimental evidence indicates C. gigas utilizes an interferon-like response to limit OsHV-1 replication and spread. Oysters injected with a viral mimic (polyI:C) develop resistance to OsHV-1. Improved survival following polyI:C injection was found later in life (within-generational immune priming) and in the next generation (multi-generational immune priming). These studies indicate that the oyster’s antiviral defense system exhibits a form of innate immune-memory. An important priority is to identify the molecular mechanisms responsible for this phenomenon. This knowledge will motivate the development of practical and cost-effective treatments for improving oyster health in aquaculture.

Offshore Wind Farms as Potential Locations for Flat Oyster ( Ostrea edulis ) Restoration in the Dutch North Sea

Abstract: The “Dutch Energy Agreement” motivates governments and industries to invest in renewable energy sources, of which offshore wind energy is one of the solutions to meet the agreed target of 16% of the total energy budget from renewable resources by 2023. An option for the multi-use of wind farms is nature-inclusive building, in which the design and construction of wind farms make use of the potential for co-design with oyster bed restoration. This can support the government’s ambitions, for the Dutch North Sea, to achieve biodiversity goals, restore ecosystem functions, and enhance ecosystem services, including future seafood production. For the recovery of flat oyster (Ostrea edulis) beds, knowledge is required about the conditions under which active restoration of this species in the North Sea can be successfully implemented. This paper gives a framework and presents results to determine suitability of wind farms for flat oyster restoration, and provides recommendations for pilot studies. Our analysis showed that a number of wind farms in the Dutch section of the North Sea are suitable locations for development of flat oyster beds. Combining oyster restoration and oyster culture, as a protein source, is a viable option worth investigating.

Volatile composition and sensory profile of oyster mushroom as affected by drying method

Abstract: The smell of food is one of the most important factors in assessing its quality. In this study, the influence of drying method on aroma/volatile compounds of oyster mushrooms (Pleurotus ostreatus Jacq.) was evaluated. The drying methods tested were convective drying (CD), freeze-drying (FD), vacuum microwave drying (VMD), and a combination of convective predrying and VM finish drying (CPD–VMFD). The volatile compounds were extracted by solid-phase microextraction and identified by gas chromatography–mass spectrometry. The best fitting model to describe the drying kinetics of the oyster mushroom was Henderson and Pabis model. Thirty-four volatiles in fresh oyster mushrooms were identified, with 3-octanone (2,890 µg/100 g dry basis) and 3-octanol (991 µg/100 g) being the major components. The total concentration of volatiles of fresh mushroom (4,506 µg/100 g) was drastically reduced by all drying treatments, although the highest contents were found after: (i) CPD (50°C)–VMFD (480 W) (245 µg/100 g) a...