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Shancen Zhao
Researcher at Beijing Genomics Institute
Publications - 44
Citations - 6881
Shancen Zhao is an academic researcher from Beijing Genomics Institute. The author has contributed to research in topics: Genome & Biology. The author has an hindex of 22, co-authored 36 publications receiving 5593 citations. Previous affiliations of Shancen Zhao include The Chinese University of Hong Kong & Shanghai University.
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Journal ArticleDOI
The sequence and de novo assembly of the giant panda genome
Ruiqiang Li,Wei Fan,Geng Tian,Hongmei Zhu,Lin He,Lin He,Jing Cai,Jing Cai,Quanfei Huang,Qingle Cai,Bo Li,Yinqi Bai,Zhihe Zhang,Ya-Ping Zhang,Wen Wang,Jun Li,Fuwen Wei,Heng Li,Min Jian,Jianwen Li,Zhaolei Zhang,Rasmus Nielsen,Dawei Li,Wanjun Gu,Zhentao Yang,Zhaoling Xuan,Oliver A. Ryder,Frederick C. Leung,Yan Zhou,Jianjun Cao,Xiao Sun,Yonggui Fu,Xiaodong Fang,Xiaosen Guo,Bo Wang,Rong Hou,Fujun Shen,Bo Mu,Peixiang Ni,Runmao Lin,Wubin Qian,Guo-Dong Wang,Guo-Dong Wang,Chang Yu,Wenhui Nie,Jinhuan Wang,Zhigang Wu,Huiqing Liang,Jiumeng Min,Qi Wu,Shifeng Cheng,Jue Ruan,Mingwei Wang,Zhongbin Shi,Ming Wen,Binghang Liu,Xiaoli Ren,Huisong Zheng,Dong Dong,Kathleen Cook,Gao Shan,Hao Zhang,Carolin Kosiol,Xueying Xie,Zuhong Lu,Hancheng Zheng,Yingrui Li,Cynthia C. Steiner,Tommy Tsan-Yuk Lam,Siyuan Lin,Qinghui Zhang,Guoqing Li,Jing Tian,Timing Gong,Hongde Liu,Dejin Zhang,Lin Fang,Chen Ye,Juanbin Zhang,Wenbo Hu,Anlong Xu,Yuanyuan Ren,Guojie Zhang,Guojie Zhang,Michael William Bruford,Qibin Li,Lijia Ma,Yiran Guo,Na An,Yujie Hu,Yang Zheng,Yongyong Shi,Zhiqiang Li,Qing Liu,Yanling Chen,Jing Zhao,Ning Qu,Shancen Zhao,Feng Tian,Xiaoling Wang,Haiyin Wang,Lizhi Xu,Xiao Liu,Tomas Vinar,Yajun Wang,Tak-Wah Lam,Siu-Ming Yiu,Shiping Liu,Hemin Zhang,Desheng Li,Yan Huang,Xia Wang,Guohua Yang,Zhi Jiang,Junyi Wang,Nan Qin,Li Li,Jingxiang Li,Lars Bolund,Karsten Kristiansen,Gane Ka-Shu Wong,Maynard V. Olson,Xiuqing Zhang,Songgang Li,Huanming Yang,Jing Wang,Jun Wang +126 more
TL;DR: Using next-generation sequencing technology alone, a draft sequence of the giant panda genome is generated and assembled, indicating that its bamboo diet might be more dependent on its gut microbiome than its own genetic composition.
Journal ArticleDOI
Draft genome sequence of chickpea ( Cicer arietinum ) provides a resource for trait improvement
Rajeev K. Varshney,Rajeev K. Varshney,Chi Song,Rachit K. Saxena,Sarwar Azam,Sheng Yu,Andrew G. Sharpe,Steven B. Cannon,Jong-Min Baek,Benjamin D. Rosen,Bunyamin Tar’an,Teresa Millán,Xudong Zhang,Larissa Ramsay,Aiko Iwata,Ying Wang,William Nelson,Andrew Farmer,Pooran M. Gaur,Carol Soderlund,R. Varma Penmetsa,Chunyan Xu,Arvind K. Bharti,Weiming He,Peter Winter,Shancen Zhao,James K. Hane,Noelia Carrasquilla-Garcia,Janet A. Condie,Hari D. Upadhyaya,Ming-Cheng Luo,Mahendar Thudi,C. L. L. Gowda,Narendra Singh,Judith Lichtenzveig,Krishna K. Gali,Josefa Rubio,N. Nadarajan,Jaroslav Dolezel,Kailash C. Bansal,Xun Xu,David Edwards,Gengyun Zhang,Guenter Kahl,Juan Gil,Karam B. Singh,Karam B. Singh,Swapan K. Datta,Scott A. Jackson,Jun Wang,Jun Wang,Douglas R. Cook +51 more
TL;DR: This work reports the ∼738-Mb draft whole genome shotgun sequence of CDC Frontier, a kabuli chickpea variety, which contains an estimated 28,269 genes, and identifies targets of both breeding-associated genetic sweeps and breeding- associated balancing selection.
Journal ArticleDOI
Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
Jizeng Jia,Shancen Zhao,Xiuying Kong,Yingrui Li,Guangyao Zhao,Weiming He,Rudi Appels,Matthias Pfeifer,Yong Tao,Xueyong Zhang,Ruilian Jing,Chi Zhang,Youzhi Ma,Lifeng Gao,Chuan Gao,Manuel Spannagl,Klaus F. X. Mayer,Dong Li,Shengkai Pan,Fengya Zheng,Qun Hu,Xianchun Xia,Jianwen Li,Qinsi Liang,Jie Chen,Thomas Wicker,Caiyun Gou,Hanhui Kuang,Genyun He,Yadan Luo,Beat Keller,Qiuju Xia,Peng Lu,Junyi Wang,Hongfeng Zou,Rongzhi Zhang,Jun-Yang Xu,Jinlong Gao,Christopher P. Middleton,Zhiwu Quan,Guangming Liu,Jian Wang,Huanming Yang,Xu Liu,Zhonghu He,Long Mao,Jun Wang,Jun Wang +47 more
TL;DR: This draft genome sequence provides insight into the environmental adaptation of bread wheat and can aid in defining the large and complicated genomes of wheat species.
Journal ArticleDOI
Draft genome of the wheat A-genome progenitor Triticum urartu
Hong-Qing Ling,Shancen Zhao,Dongcheng Liu,Junyi Wang,Hua Sun,Chi Zhang,Huajie Fan,Dong Li,Lingli Dong,Yong Tao,Chuan Gao,Huilan Wu,Yiwen Li,Yan Cui,Xiaosen Guo,Shusong Zheng,Biao Wang,Kang Yu,Qinsi Liang,Wenlong Yang,Xueyuan Lou,Jie Chen,Mingji Feng,Jianbo Jian,Xiaofei Zhang,Guangbin Luo,Ying Jiang,Junjie Liu,Zhaobao Wang,Yuhui Sha,Bairu Zhang,Hua-Jun Wu,Dingzhong Tang,Qian-Hua Shen,Pengya Xue,Shenhao Zou,Xiu-Jie Wang,Xin Liu,Famin Wang,Yanping Yang,Xueli An,Zhenying Dong,Kunpu Zhang,Xiangqi Zhang,Ming-Cheng Luo,Jan Dvorak,Yiping Tong,Jian Wang,Huanming Yang,Zhensheng Li,Daowen Wang,Aimin Zhang,Jun Wang,Jun Wang +53 more
TL;DR: The T. urartu genome assembly provides a diploid reference for analysis of polyploid wheat genomes and is a valuable resource for the genetic improvement of wheat.
Journal ArticleDOI
Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization
Cheng Qin,Cheng Qin,Changshui Yu,Yaou Shen,Xiaodong Fang,Xiaodong Fang,Lang Chen,Jiumeng Min,Jiaowen Cheng,Shancen Zhao,Meng Xu,Yong Luo,Yulan Yang,Zhiming Wu,Likai Mao,Haiyang Wu,Changying Ling-Hu,Huangkai Zhou,Haijian Lin,Sandra Isabel González-Morales,Diana L. Trejo-Saavedra,Hao Tian,Xin Tang,Maojun Zhao,Zhiyong Huang,Anwei Zhou,Xiaoming Yao,Junjie Cui,Wenqi Li,Zhe Chen,Yongqiang Feng,Yongchao Niu,Shimin Bi,Xiuwei Yang,Weipeng Li,Huimin Cai,Xirong Luo,Salvador Montes-Hernández,Marco Antonio Leyva-González,Zhiqiang Xiong,Xiujing He,Lijun Bai,Shu Tan,Xiangqun Tang,Dan Liu,Jinwen Liu,Shangxing Zhang,Maoshan Chen,Lu Zhang,Lu Zhang,Li Zhang,Yinchao Zhang,Weiqin Liao,Yan Zhang,Min Wang,Xiaodan Lv,Bo Wen,Hongjun Liu,Hemi Luan,Yonggang Zhang,Shuang Yang,Xiaodian Wang,Jiaohui Xu,Xueqin Li,Shuai Cheng Li,Junyi Wang,Alain Palloix,Paul W. Bosland,Yingrui Li,Anders Krogh,Rafael F. Rivera-Bustamante,Luis Herrera-Estrella,Ye Yin,Jiping Yu,Kailin Hu,Zhiming Zhang +75 more
TL;DR: It is found that dosage compensation effect of tandem duplication genes probably contributed to the pungent diversification in pepper and the Capsicum reference genome provides crucial information for the study of not only the evolution of the pepper genome but also, the Solanaceae family.