R
Rajasree Menon
Researcher at University of Michigan
Publications - 79
Citations - 3875
Rajasree Menon is an academic researcher from University of Michigan. The author has contributed to research in topics: Alternative splicing & Kidney disease. The author has an hindex of 28, co-authored 71 publications receiving 3029 citations.
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Journal ArticleDOI
Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.
Gilbert S. Omenn,David J. States,Marcin Adamski,Thomas W. Blackwell,Rajasree Menon,Henning Hermjakob,Rolf Apweiler,Brian B. Haab,Richard J. Simpson,James S. Eddes,Eugene A. Kapp,Robert L. Moritz,Daniel W. Chan,Alex J. Rai,Arie Admon,Ruedi Aebersold,Ruedi Aebersold,Jimmy K. Eng,William S. Hancock,Stanley A. Hefta,Helmut E. Meyer,Young Ki Paik,Jong Shin Yoo,Peipei Ping,Joel G. Pounds,Joshua N. Adkins,Xiaohong Qian,Rong Wang,Valerie C. Wasinger,Chi Yue Wu,Xiaohang Zhao,Rong Zeng,Alexander I. Archakov,Akira Tsugita,Ilan Beer,Akhilesh Pandey,Michael Pisano,Philip C. Andrews,Harald Tammen,David W. Speicher,Samir M. Hanash,Samir M. Hanash +41 more
TL;DR: Reverse protein to DNA matching identified proteins for 118 previously unidentified ORFs in the PPP database, and the database permits examination of many other subsets, such as 1274 proteins identified with three or more peptides.
Journal ArticleDOI
High-Throughput Screening Enhances Kidney Organoid Differentiation From Human Pluripotent Stem Cells and Enables Automated Multidimensional Phenotyping
Stefan Czerniecki,Nelly M. Cruz,Jennifer L. Harder,Rajasree Menon,James Annis,Edgar A. Otto,Ramila E. Gulieva,Laura V. Islas,Yong Kyun Kim,Linh M. Tran,Timothy J. Martins,Jeffrey W. Pippin,Hongxia Fu,Matthias Kretzler,Stuart J. Shankland,Jonathan Himmelfarb,Randall T. Moon,Neal Paragas,Benjamin S. Freedman +18 more
TL;DR: A fully automated, HTS-compatible platform for enhanced differentiation and phenotyping of human kidney organoids that reveals an unexpected role for myosin in polycystic kidney disease and establishes an attractive platform for multidimensional phenotypic screening.
Journal ArticleDOI
Systematic comparison of the human saliva and plasma proteomes
Weihong Yan,Rolf Apweiler,Brian M. Balgley,Pinmanee Boontheung,Jonathan L. Bundy,Benjamin Cargile,Steve W. Cole,Xueping Fang,Mireya Gonzalez-Begne,Timothy J. Griffin,Fred K. Hagen,Shen Hu,Lawrence E. Wolinsky,Cheng S. Lee,Daniel Malamud,James E. Melvin,Rajasree Menon,Michael Mueller,Renli Qiao,Nelson L. Rhodus,Joel Sevinsky,David J. States,James Stephenson,Shawn Than,John R. Yates,Weixia Yu,Hongwei Xie,Yongming Xie,Gilbert S. Omenn,Joseph A. Loo,David T.W. Wong +30 more
TL;DR: A comprehensive catalog of the salivary proteome and its comparison to the plasma proteome provides insights useful for future study, such as exploration of potential biomarkers for disease diagnostics.
Journal ArticleDOI
Human Proteinpedia enables sharing of human protein data.
Suresh Mathivanan,Suresh Mathivanan,Mukhtar Ahmed,Natalie G. Ahn,Hainard Alexandre,Ramars Amanchy,Philip C. Andrews,Joel S. Bader,Brian M. Balgley,Marcus Bantscheff,Keiryn L. Bennett,Erik Björling,Blagoy Blagoev,Ron Bose,Samir K. Brahmachari,Alma S Burlingame,Xosé R. Bustelo,Gerard Cagney,Greg T. Cantin,Helene L. Cardasis,Julio E. Celis,Raghothama Chaerkady,Feixia Chu,Philip A. Cole,Catherine E. Costello,Robert J. Cotter,David K. Crockett,James P. DeLany,Angelo M. De Marzo,Leroi V. DeSouza,Eric W. Deutsch,E. Dransfield,Gerard Drewes,Arnaud Droit,Michael J. Dunn,Kojo S.J. Elenitoba-Johnson,Rob M. Ewing,Jennifer E. Van Eyk,Vitor M. Faça,Jayson A. Falkner,Xiangming Fang,Catherine Fenselau,Daniel Figeys,Pierre Gagné,Cecilia Gelfi,Kris Gevaert,Jeffrey M. Gimble,Florian Gnad,Renu Goel,Pavel Gromov,Samir M. Hanash,William S. Hancock,H. C. Harsha,Gerald W. Hart,Faith A. Hays,Fuchu He,Prashantha Hebbar,Kenny Helsens,Heiko Hermeking,Winston Hide,Karin Hjernø,Denis F. Hochstrasser,Oliver Hofmann,David M Horn,Ralph H. Hruban,Nieves Ibarrola,Peter James,Ole N. Jensen,Pia Hønnerup Jensen,Peter Jung,Kumaran Kandasamy,Kumaran Kandasamy,Indu Kheterpal,Reiko F. Kikuno,Ulrike Korf,Roman Körner,Bernhard Kuster,Min-Seok Kwon,Hyoung Joo Lee,Young Jin Lee,Michael Lefevre,Minna Lehvaslaiho,Pierre Lescuyer,Fredrik Levander,Megan S. Lim,Christian Löbke,Joseph A. Loo,Matthias Mann,Matthias Mann,Lennart Martens,Juan Martínez-Heredia,Mark E. McComb,James P. McRedmond,Alexander Mehrle,Rajasree Menon,Christine A. Miller,Harald Mischak,Subburaman Mohan,Riaz Mohmood,Henrik Molina,Michael Moran,James D. Morgan,Robert Moritz,Martine Morzel,David C. Muddiman,Anuradha Nalli,J. Daniel Navarro,Thomas A. Neubert,Osamu Ohara,Rafael Oliva,Gilbert S. Omenn,Masaaki Oyama,Young Ki Paik,Kyla Pennington,Rainer Pepperkok,Balamurugan Periaswamy,Balamurugan Periaswamy,Emanuel F. Petricoin,Guy G. Poirier,T. S. Keshava Prasad,Samuel O. Purvine,B. Abdul Rahiman,Prasanna Ramachandran,Y. L. Ramachandra,Robert H. Rice,Jens Rick,Ragna Rönnholm,Johanna Salonen,Jean-Charles Sanchez,Thierry Sayd,Beerelli Seshi,Kripa Shankari,Shi Jun Sheng,Vivekananda Shetty,K. Shivakumar,Richard J. Simpson,Ravi Sirdeshmukh,K. W. Michael Siu,Jeffrey C. Smith,Richard D. Smith,David J. States,Sumio Sugano,Matthew J. Sullivan,Giulio Superti-Furga,Maarit Takatalo,Visith Thongboonkerd,Jonathan C. Trinidad,Mathias Uhlén,Joël Vandekerckhove,Julian Vasilescu,Timothy D. Veenstra,Jose-Manuel Vidal-Taboada,Mauno Vihinen,Robin Wait,Xiaoyue Wang,Stefan Wiemann,Billy Wu,Tao Xu,John R. Yates,Jun Zhong,Ming Zhou,Yunping Zhu,Petra Zürbig,Akhilesh Pandey +163 more
TL;DR: MMCD is a practical tool for expediting the time-consuming steps of identifying and researching small molecules and is compatible with both NMR and MS data and facilitates high-throughput metabolomics investigations.
Journal ArticleDOI
Single-cell analysis of progenitor cell dynamics and lineage specification in the human fetal kidney
Rajasree Menon,Edgar A. Otto,Austin Kokoruda,Jian Zhou,Zidong Zhang,Euisik Yoon,Yu Chih Chen,Olga G. Troyanskaya,Jason R. Spence,Matthias Kretzler,Cristina Cebrian +10 more
TL;DR: A comprehensive and dynamic gene expression profile of the developing human kidney at the single-cell level is provided and computational approaches infer developmental trajectories and interrogate the complex network of signaling pathways and cellular transitions.