V
Vincent Schächter
Researcher at University of Évry Val d'Essonne
Publications - 36
Citations - 6891
Vincent Schächter is an academic researcher from University of Évry Val d'Essonne. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 18, co-authored 36 publications receiving 6584 citations. Previous affiliations of Vincent Schächter include Centre national de la recherche scientifique & French Alternative Energies and Atomic Energy Commission.
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Journal ArticleDOI
Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype
Olivier Jaillon,Jean-Marc Aury,Frédéric Brunet,Jean-Louis Petit,Nicole Stange-Thomann,Evan Mauceli,Laurence Bouneau,Cécile Fischer,Catherine Ozouf-Costaz,Alain Bernot,Sophie Nicaud,David M. Jaffe,Sheila Fisher,Georges Lutfalla,Carole Dossat,Béatrice Segurens,Corinne Dasilva,Marcel Salanoubat,Michael Levy,Nathalie Boudet,Sergi Castellano,Véronique Anthouard,Claire Jubin,Vanina Castelli,Michael Katinka,Benoit Vacherie,Christian Biémont,Zineb Skalli,Laurence Cattolico,Julie Poulain,Véronique de Berardinis,Corinne Cruaud,Simone Duprat,Philippe Brottier,Jean-Pierre Coutanceau,Jérôme Gouzy,Genís Parra,Guillaume Lardier,Charles Chapple,Kevin McKernan,Paul A. McEwan,Stephanie Bosak,Manolis Kellis,Jean-Nicolas Volff,Roderic Guigó,Michael C. Zody,Jill P. Mesirov,Kerstin Lindblad-Toh,Bruce W. Birren,Chad Nusbaum,Daniel Kahn,Marc Robinson-Rechavi,Vincent Laudet,Vincent Schächter,Francis Quetier,William Saurin,Claude Scarpelli,Patrick Wincker,Eric S. Lander,Eric S. Lander,Jean Weissenbach,Hugues Roest Crollius,Hugues Roest Crollius +62 more
TL;DR: Genome analysis provides a greatly improved fish gene catalogue, including identifying key genes previously thought to be absent in fish, and reconstructs much of the evolutionary history of ancient and recent chromosome rearrangements leading to the modern human karyotype.
Journal ArticleDOI
The protein-protein interaction map of Helicobacter pylori.
Jean-Christophe Rain,Luc Selig,Hilde De Reuse,Véronique Battaglia,Céline Reverdy,Stéphane Simon,Gerlinde Lenzen,Fabien Petel,Jérôme Wojcik,Vincent Schächter,Y. Chemama,Agnès Labigne,Pierre Legrain +12 more
TL;DR: A large-scale protein–protein interaction map of the human gastric pathogen Helicobacter pylori is built and the assignment of unannotated proteins to biological pathways is permitted.
Journal ArticleDOI
Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia
Jean-Marc Aury,Olivier Jaillon,Laurent Duret,Benjamin Noel,Claire Jubin,Betina M. Porcel,Béatrice Ségurens,Vincent Daubin,Véronique Anthouard,Nathalie Aiach,Olivier Arnaiz,Alain Billaut,Janine Beisson,Isabelle Blanc,Khaled Bouhouche,Francisco Câmara,Sandra Duharcourt,Roderic Guigó,Delphine Gogendeau,Michael Katinka,Anne-Marie Keller,Roland Kissmehl,Catherine Klotz,Anne Le Mouël,Gersende Lepère,Sophie Malinsky,Mariusz Nowacki,Jacek K. Nowak,Helmut Plattner,Julie Poulain,Françoise Ruiz,Vincent Serrano,Marek Zagulski,Philippe Dessen,Mireille Bétermier,Mireille Bétermier,Jean Weissenbach,Claude Scarpelli,Vincent Schächter,Linda Sperling,Eric Meyer,Jean Cohen,Patrick Wincker +42 more
TL;DR: It is shown that in the unicellular eukaryote Paramecium tetraurelia, a ciliate, most of the nearly 40,000 genes arose through at least three successive whole-genome duplications.
Journal ArticleDOI
The BioPAX community standard for pathway data sharing
Emek Demir,Emek Demir,Michael P. Cary,Suzanne M. Paley,Ken Fukuda,Christian Lemer,Imre Vastrik,Guanming Wu,Peter D'Eustachio,Carl F. Schaefer,Joanne S. Luciano,Frank Schacherer,Irma Martínez-Flores,Zhenjun Hu,Verónica Jiménez-Jacinto,Geeta Joshi-Tope,Kumaran Kandasamy,Alejandra López-Fuentes,Huaiyu Mi,Elgar Pichler,Igor Rodchenkov,Andrea Splendiani,Andrea Splendiani,Sasha Tkachev,Jeremy Zucker,Gopal R. Gopinath,Harsha Rajasimha,Harsha Rajasimha,Ranjani Ramakrishnan,Imran Shah,Mustafa H Syed,Nadia Anwar,Özgün Babur,Özgün Babur,Michael L. Blinov,Erik Brauner,Dan Corwin,Sylva L. Donaldson,Frank Gibbons,Robert N. Goldberg,Peter Hornbeck,Augustin Luna,Peter Murray-Rust,Eric K. Neumann,Oliver Reubenacker,Matthias Samwald,Matthias Samwald,Martijn P. van Iersel,Sarala M. Wimalaratne,Keith Allen,Burk Braun,Michelle Whirl-Carrillo,Kei-Hoi Cheung,Kam D. Dahlquist,Andrew Finney,Marc Gillespie,Elizabeth M. Glass,Li Gong,Robin Haw,Michael Honig,Olivier Hubaut,David W. Kane,Shiva Krupa,Martina Kutmon,Julie Leonard,Debbie Marks,David Merberg,Victoria Petri,Alexander R. Pico,Dean Ravenscroft,Liya Ren,Nigam H. Shah,Margot Sunshine,Rebecca Tang,Ryan Whaley,Stan Letovksy,Kenneth H. Buetow,Andrey Rzhetsky,Vincent Schächter,Bruno S. Sobral,Ugur Dogrusoz,Shannon K. McWeeney,Mirit I. Aladjem,Ewan Birney,Julio Collado-Vides,Susumu Goto,Michael Hucka,Nicolas Le Novère,Natalia Maltsev,Akhilesh Pandey,Paul Thomas,Edgar Wingender,Peter D. Karp,Chris Sander,Gary D. Bader +94 more
TL;DR: Thousands of interactions, organized into thousands of pathways, from many organisms are available from a growing number of databases, and this large amount of pathway data in a computable form will support visualization, analysis and biological discovery.
Global trends of whole-genome duplications revealed by the ciliate
Jean-Marc Auryl,Olivier Jaillon,Laurent Duree,Claire Jubin,Betina M. Porcel,Béatrice Segurens,Vincent Daubin,Véronique Anthouard,Nathalie Aiach,Olivier Arnaiz,Alain Billaue,Janine Beisson,Isabelle Blanc,Khaled Bouhouche,Francisco Camara,Sandra Duharcourt,Roderic Guigó,Delphine Gogendeau,Michael Katinka,Anne-Marie Keller,Roland Kissmehl,Catherine Klotz,Anne Le Mouël,Gersende Lepère,Sophie Malinsky,Mariusz Nowacki,Jacek K. Nowak,Helmut Plattner,Julie Poulain,Vincent Serrano,Marek Zagulski,Philippe Dessen,Mireille Bétermier,Jean Weissenbach,Claude Scarpelli,Vincent Schächter,Linda Sperling,Eric Meyer,Jean Cohen,Patrick Wincker +39 more
TL;DR: In the unicellular eukaryote Paramecium tetraurelia, a ciliate, most of the nearly 40,000 genes arose through at least three successive whole-genome duplications as mentioned in this paper.