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Journal ArticleDOI

Clinical epigenetics: seizing opportunities for translation.

María Berdasco, +1 more
- 01 Feb 2019 - 
- Vol. 20, Iss: 2, pp 109-127
TLDR
Beyond helping to understand disease biology, clinical epigenetics is being incorporated into patient management in oncology, as well as being explored for clinical applicability for other human pathologies such as neurological and infectious diseases and immune system disorders.
Abstract
Biomarker discovery and validation are necessary for improving the prediction of clinical outcomes and patient monitoring. Despite considerable interest in biomarker discovery and development, improvements in the range and quality of biomarkers are still needed. The main challenge is how to integrate preclinical data to obtain a reliable biomarker that can be measured with acceptable costs in routine clinical practice. Epigenetic alterations are already being incorporated as valuable candidates in the biomarker field. Furthermore, their reversible nature offers a promising opportunity to ameliorate disease symptoms by using epigenetic-based therapy. Thus, beyond helping to understand disease biology, clinical epigenetics is being incorporated into patient management in oncology, as well as being explored for clinical applicability for other human pathologies such as neurological and infectious diseases and immune system disorders.

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Citations
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Journal ArticleDOI

Epigenetics modifiers: potential hub for understanding and treating neurodevelopmental disorders from hypoxic injury

TL;DR: This review focuses on the current understanding of the intersection between epigenetics, brain development, and hypoxia and investigates opportunities for the use of epigenetics as biomarkers of neurodevelopmental disease after hypoxic injury.
Journal ArticleDOI

Epigenetic Peripheral Biomarkers for Early Diagnosis of Alzheimer’s Disease

Chiara Villa, +1 more
- 22 Jul 2022 - 
TL;DR: Alzheimer’s disease is a progressive neurodegenerative disorder and represents the leading cause of cognitive impairment and dementia in older individuals, and epigenetic mechanisms, able to mediate the interaction between the genome and the environment, are emerging as important players in AD pathogenesis.
Journal ArticleDOI

Characterization of Blood Surrogate Immune-Methylation Biomarkers for Immune Cell Infiltration in Chronic Inflammaging Disorders.

TL;DR: A blood-based immune-related DNA methylation signature in multiple inflammaging diseases associated with changes in blood immune cell counts and predictive for immune cell infiltration in diseased tissues is identified.
Journal ArticleDOI

DNA methylation biomarker selected by an ensemble machine learning approach predicts mortality risk in an HIV-positive veteran population

TL;DR: A panel of DNAm features associated with mortality risk in PLWH may serve as predictive biomarkers for mortality risk among HIV-positive people living with HIV.
Journal ArticleDOI

Known epigenetic biomarkers for prostate cancer detection and management: exploring the potential of blood-based liquid biopsies.

TL;DR: An overview of epigenetic biomarkers current state is provided based on a comprehensive review of the relevant literature in blood-based liquid biopsies and challenges/limitations of this new and growing field of cancer biomarkers.
References
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Journal ArticleDOI

Integrative analysis of 111 reference human epigenomes

Anshul Kundaje, +123 more
- 19 Feb 2015 - 
TL;DR: It is shown that disease- and trait-associated genetic variants are enriched in tissue-specific epigenomic marks, revealing biologically relevant cell types for diverse human traits, and providing a resource for interpreting the molecular basis of human disease.

Integrative analysis of 111 reference human epigenomes

TL;DR: In this article, the authors describe the integrative analysis of 111 reference human epigenomes generated as part of the NIH Roadmap Epigenomics Consortium, profiled for histone modification patterns, DNA accessibility, DNA methylation and RNA expression.
Journal ArticleDOI

Non-coding RNAs in human disease

TL;DR: Dysregulation of these ncRNAs is being found to have relevance not only to tumorigenesis, but also to neurological, cardiovascular, developmental and other diseases, and there is great interest in therapeutic strategies to counteract these perturbations.
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